RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C YHL017WP38745 532 aa1.37□□□□□ -2.19
SEC3YER008C BEM4P39011 633 aa1.37□□□□□ -2.19
SEC3YER008C URM1P40554 99 aaPredicted RBP1.37□□□□□ -2.19
SEC3YER008C SRB7P47822 140 aa1.37□□□□□ -2.19
SEC3YER008C YDL183CP48569 320 aa1.37□□□□□ -2.19
SEC3YER008C GND2P53319 492 aa1.37□□□□□ -2.19
SEC3YER008C RPT6Q01939 405 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C LGE1Q02796 332 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C YPL107WQ02873 248 aa1.37□□□□□ -2.19
SEC3YER008C GSF2Q04697 403 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C YCG1Q06680 1035 aa1.37□□□□□ -2.19
SEC3YER008C SPE3Q12074 293 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C SUL2Q12325 893 aa1.37□□□□□ -2.19
SEC3YER008C TRM13Q12383 476 aa1.37□□□□□ -2.19
SEC3YER008C PNO1Q99216 274 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C TRA1P38811 3744 aa1.37□□□□□ -2.19
SEC3YER008C TPK1P06244 397 aa1.37□□□□□ -2.19
SEC3YER008C TUB3P09734 445 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C CKA1P15790 372 aa1.37□□□□□ -2.19
SEC3YER008C MNN2P38069 597 aa1.37□□□□□ -2.19
SEC3YER008C UBP13P38187 747 aa1.37□□□□□ -2.19
SEC3YER008C FMO1P38866 432 aa1.37□□□□□ -2.19
SEC3YER008C CRG1P38892 291 aaRIP-Chip data1.37□□□□□ -2.19not detected
SEC3YER008C ZAP1P47043 880 aa1.37□□□□□ -2.19
SEC3YER008C CTF18P49956 741 aa1.37□□□□□ -2.19
SEC3YER008C VPS75P53853 264 aa1.37□□□□□ -2.19
SEC3YER008C OAZ1Q02803 292 aa1.37□□□□□ -2.19
SEC3YER008C FCP1Q03254 732 aa1.37□□□□□ -2.19
SEC3YER008C ERB1Q04660 807 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C CSR1Q06705 408 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C PSF3Q12146 194 aa1.37□□□□□ -2.19
SEC3YER008C LEU2P04173 364 aaPredicted RBP1.37□□□□□ -2.19
SEC3YER008C TRP4P07285 380 aaPredicted RBP1.37□□□□□ -2.19
SEC3YER008C YPK1P12688 680 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C NUP1P20676 1076 aa1.37□□□□□ -2.19
SEC3YER008C ELM1P32801 640 aa1.37□□□□□ -2.19
SEC3YER008C ZIM17P42844 174 aa1.37□□□□□ -2.19
SEC3YER008C UBX6P47049 396 aa1.37□□□□□ -2.19
SEC3YER008C NOP9P47077 666 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C YJR039WP47107 1121 aa1.37□□□□□ -2.19
SEC3YER008C TEL2P53038 688 aa1.37□□□□□ -2.19
SEC3YER008C ART5P53244 586 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C DIP5P53388 608 aa1.37□□□□□ -2.19
SEC3YER008C ALF1P53904 254 aa1.37□□□□□ -2.19
SEC3YER008C KIN4Q01919 800 aa1.37□□□□□ -2.19
SEC3YER008C ATG21Q02887 496 aa1.37□□□□□ -2.19
SEC3YER008C NGL2Q03264 515 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C YLR456WQ06199 204 aa1.37□□□□□ -2.19
SEC3YER008C LYS21Q12122 440 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C GPM3Q12326 303 aa1.37□□□□□ -2.19
SEC3YER008C APM4Q99186 491 aa1.37□□□□□ -2.19
SEC3YER008C YLL066CQ99208 1374 aa1.36□□□□□ -2.19
SEC3YER008C MIS1P09440 975 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C ERG8P24521 451 aa1.36□□□□□ -2.19
SEC3YER008C LAS1P36146 502 aaPredicted RBP1.36□□□□□ -2.19
SEC3YER008C SCO2P38072 301 aa1.36□□□□□ -2.19
SEC3YER008C RFC1P38630 861 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C FUN12P39730 1002 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C NAS2P40555 220 aa1.36□□□□□ -2.19
SEC3YER008C CIR1P42940 261 aa1.36□□□□□ -2.19
SEC3YER008C MAK10Q02197 733 aa1.36□□□□□ -2.19
SEC3YER008C ISA2Q12425 185 aa1.36□□□□□ -2.19
SEC3YER008C YOR019WQ99248 730 aa1.36□□□□□ -2.19
SEC3YER008C HRP1Q99383 534 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C BI2P03873 423 aa1.36□□□□□ -2.19
SEC3YER008C FUM1P08417 488 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C EST1P17214 699 aaPredicted RBP1.36□□□□□ -2.19
SEC3YER008C PEX1P24004 1043 aa1.36□□□□□ -2.19
SEC3YER008C MRP20P32387 263 aa1.36□□□□□ -2.19
SEC3YER008C VFA1P40080 203 aa1.36□□□□□ -2.19
SEC3YER008C YJR061WP40355 935 aa1.36□□□□□ -2.19
SEC3YER008C FET5P43561 622 aa1.36□□□□□ -2.19
SEC3YER008C MMR1Q06324 491 aa1.36□□□□□ -2.19
SEC3YER008C OPY2Q06810 360 aa1.36□□□□□ -2.19
SEC3YER008C YOL159CQ08300 171 aa1.36□□□□□ -2.19
SEC3YER008C TMA16Q08687 178 aa1.36□□□□□ -2.19
SEC3YER008C HSP42Q12329 375 aa1.36□□□□□ -2.19
SEC3YER008C YOR111WQ99210 232 aa1.36□□□□□ -2.19
SEC3YER008C EDE1P34216 1381 aa1.36□□□□□ -2.19
SEC3YER008C LAM4P38800 1345 aa1.36□□□□□ -2.19
SEC3YER008C HMG2P12684 1045 aa1.36□□□□□ -2.19
SEC3YER008C PDX1P16451 410 aa1.36□□□□□ -2.19
SEC3YER008C DBF4P32325 704 aa1.36□□□□□ -2.19
SEC3YER008C FRD1P32614 470 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C ARB1P40024 610 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C OSW5P40219 148 aa1.36□□□□□ -2.19
SEC3YER008C YJL068CP40363 299 aa1.36□□□□□ -2.19
SEC3YER008C TAH11P47112 604 aa1.36□□□□□ -2.19
SEC3YER008C NCS2P53923 493 aaPredicted RBP1.36□□□□□ -2.19
SEC3YER008C SEC5P89102 971 aa1.36□□□□□ -2.19
SEC3YER008C APM1Q00776 475 aaPredicted RBP1.36□□□□□ -2.19
SEC3YER008C YML053CQ04978 212 aa1.36□□□□□ -2.19
SEC3YER008C ADY4Q05955 493 aa1.36□□□□□ -2.19
SEC3YER008C IWR1Q07532 353 aaPredicted RBP1.36□□□□□ -2.19
SEC3YER008C BMS1Q08965 1183 aaKnown RBP1.36□□□□□ -2.19
SEC3YER008C SPE4Q12455 300 aa1.36□□□□□ -2.19
SEC3YER008C YRF1-4O13559 1382 aa1.35□□□□□ -2.19
SEC3YER008C YMR084WA2P2R3 262 aa1.35□□□□□ -2.19
SEC3YER008C STF1P01098 86 aa1.35□□□□□ -2.19
SEC3YER008C PMA1P05030 918 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms