RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	PWP1	P21304	576 aa	Known RBP	3.74	□□□□□ -1.81
PMI40	YER003C	YSP3	P25036	478 aa		3.74	□□□□□ -1.81
PMI40	YER003C	RPC53	P25441	422 aa		3.74	□□□□□ -1.81
PMI40	YER003C	PDB1	P32473	366 aa	Known RBP	3.74	□□□□□ -1.81
PMI40	YER003C	AAP1	P37898	856 aa	Known RBP	3.74	□□□□□ -1.81
PMI40	YER003C	AGP2	P38090	596 aa		3.74	□□□□□ -1.81
PMI40	YER003C	MUM2	P38236	366 aa		3.74	□□□□□ -1.81
PMI40	YER003C	MTG2	P38860	518 aa		3.74	□□□□□ -1.81
PMI40	YER003C	BDH2	P39713	417 aa		3.74	□□□□□ -1.81
PMI40	YER003C	SEC24	P40482	926 aa	Known RBP	3.74	□□□□□ -1.81
PMI40	YER003C	MET28	P40573	187 aa		3.74	□□□□□ -1.81
PMI40	YER003C	RPN11	P43588	306 aa	Known RBP	3.74	□□□□□ -1.81
PMI40	YER003C	YGR066C	P53242	292 aa		3.74	□□□□□ -1.81
PMI40	YER003C	YAT1	P80235	687 aa		3.74	□□□□□ -1.81
PMI40	YER003C	YML119W	Q03208	357 aa		3.74	□□□□□ -1.81
PMI40	YER003C	YDR109C	Q04585	715 aa		3.74	□□□□□ -1.81
PMI40	YER003C	YPL272C	Q08984	517 aa		3.74	□□□□□ -1.81
PMI40	YER003C	RTN2	Q12443	393 aa		3.74	□□□□□ -1.81
PMI40	YER003C	CPA2	P03965	1118 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
PMI40	YER003C	SRP54	P20424	541 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	RNR3	P21672	869 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	POL4	P25615	582 aa		3.73	□□□□□ -1.81
PMI40	YER003C	LAC1	P28496	418 aa		3.73	□□□□□ -1.81
PMI40	YER003C	DBF4	P32325	704 aa		3.73	□□□□□ -1.81
PMI40	YER003C	SWI3	P32591	825 aa		3.73	□□□□□ -1.81
PMI40	YER003C	ORC2	P32833	620 aa		3.73	□□□□□ -1.81
PMI40	YER003C	YMC2	P38087	329 aa		3.73	□□□□□ -1.81
PMI40	YER003C	VBA2	P38358	474 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	SRP72	P38688	640 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	SEC31	P38968	1273 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	SDS3	P40505	327 aa		3.73	□□□□□ -1.81
PMI40	YER003C	SWP82	P43554	623 aa		3.73	□□□□□ -1.81
PMI40	YER003C	YGL036W	P53185	909 aa	Predicted RBP	3.73	□□□□□ -1.81
PMI40	YER003C	COG2	P53271	262 aa		3.73	□□□□□ -1.81
PMI40	YER003C	YGR250C	P53316	781 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	CPR8	P53728	308 aa		3.73	□□□□□ -1.81
PMI40	YER003C	JJJ1	P53863	590 aa		3.73	□□□□□ -1.81
PMI40	YER003C	SWA2	Q06677	668 aa		3.73	□□□□□ -1.81
PMI40	YER003C	PSR1	Q07800	427 aa		3.73	□□□□□ -1.81
PMI40	YER003C	GPN2	Q08726	347 aa	Predicted RBP	3.73	□□□□□ -1.81
PMI40	YER003C	MDM20	Q12387	796 aa	Known RBP	3.73	□□□□□ -1.81
PMI40	YER003C	GRX6	Q12438	231 aa		3.73	□□□□□ -1.81
PMI40	YER003C	SPE4	Q12455	300 aa		3.73	□□□□□ -1.81
PMI40	YER003C	SMC6	Q12749	1114 aa		3.73	□□□□□ -1.81
PMI40	YER003C	Q0010	Q9ZZX9	128 aa		3.73	□□□□□ -1.81
PMI40	YER003C	CDC43	P18898	376 aa		3.72	□□□□□ -1.81
PMI40	YER003C	CDC60	P26637	1090 aa	Known RBP	3.72	□□□□□ -1.81
PMI40	YER003C	MRPL9	P31334	269 aa		3.72	□□□□□ -1.81
PMI40	YER003C	GDA1	P32621	518 aa		3.72	□□□□□ -1.81
PMI40	YER003C	NTR2	P36118	322 aa	Predicted RBP	3.72	□□□□□ -1.81
PMI40	YER003C	REG2	P38232	338 aa		3.72	□□□□□ -1.81
PMI40	YER003C	YEL057C	P39983	233 aa		3.72	□□□□□ -1.81
PMI40	YER003C	MIT1	P40002	666 aa		3.72	□□□□□ -1.81
PMI40	YER003C	MET18	P40469	1032 aa		3.72	□□□□□ -1.81
PMI40	YER003C	STU2	P46675	888 aa		3.72	□□□□□ -1.81
PMI40	YER003C	LYS4	P49367	693 aa	Predicted RBP	3.72	□□□□□ -1.81
PMI40	YER003C	STR3	P53101	465 aa	Known RBP	3.72	□□□□□ -1.81
PMI40	YER003C	YGL117W	P53133	265 aa		3.72	□□□□□ -1.81
PMI40	YER003C	WAR1	Q03631	944 aa		3.72	□□□□□ -1.81
PMI40	YER003C	YML037C	Q03703	340 aa		3.72	□□□□□ -1.81
PMI40	YER003C	RCF1	Q03713	159 aa		3.72	□□□□□ -1.81
PMI40	YER003C	YDR131C	Q03899	556 aa		3.72	□□□□□ -1.81
PMI40	YER003C	PLM2	Q04383	521 aa		3.72	□□□□□ -1.81
PMI40	YER003C	TMN2	Q04562	672 aa		3.72	□□□□□ -1.81
PMI40	YER003C	YML053C	Q04978	212 aa		3.72	□□□□□ -1.81
PMI40	YER003C	GET3	Q12154	354 aa	Known RBP	3.72	□□□□□ -1.81
PMI40	YER003C	TAF3	Q12297	353 aa		3.72	□□□□□ -1.81
PMI40	YER003C	YPT6	Q99260	215 aa		3.72	□□□□□ -1.81
PMI40	YER003C	SES1	P07284	462 aa	Known RBP	3.71	□□□□□ -1.82
PMI40	YER003C	DMC1	P25453	334 aa		3.71	□□□□□ -1.82
PMI40	YER003C	YIH1	P25637	258 aa		3.71	□□□□□ -1.82
PMI40	YER003C	UBP11	P36026	717 aa		3.71	□□□□□ -1.82
PMI40	YER003C	SRO77	P38163	1010 aa		3.71	□□□□□ -1.82
PMI40	YER003C	VID24	P38263	362 aa		3.71	□□□□□ -1.82
PMI40	YER003C	LRP1	P38801	184 aa	Known RBP	3.71	□□□□□ -1.82
PMI40	YER003C	SMF1	P38925	575 aa		3.71	□□□□□ -1.82
PMI40	YER003C	CCT6	P39079	546 aa		3.71	□□□□□ -1.82
PMI40	YER003C	SAP1	P39955	897 aa	Known RBP	3.71	□□□□□ -1.82
PMI40	YER003C	MRX1	P40050	688 aa		3.71	□□□□□ -1.82
PMI40	YER003C	OPT1	P40897	799 aa		3.71	□□□□□ -1.82
PMI40	YER003C	CCT7	P42943	550 aa	Known RBP	3.71	□□□□□ -1.82
PMI40	YER003C	IST1	P53843	298 aa	Predicted RBP	3.71	□□□□□ -1.82
PMI40	YER003C	ADE16	P54113	591 aa	Known RBP	3.71	□□□□□ -1.82
PMI40	YER003C	RSM28	Q03430	361 aa		3.71	□□□□□ -1.82
PMI40	YER003C	RAD33	Q04231	177 aa		3.71	□□□□□ -1.82
PMI40	YER003C	BUD22	Q04347	519 aa	Known RBP	3.71	□□□□□ -1.82
PMI40	YER003C	RIM20	Q12033	661 aa		3.71	□□□□□ -1.82
PMI40	YER003C	YMR084W	A2P2R3	262 aa		3.7	□□□□□ -1.82
PMI40	YER003C	TPK2	P06245	380 aa		3.7	□□□□□ -1.82
PMI40	YER003C	PCT1	P13259	424 aa		3.7	□□□□□ -1.82
PMI40	YER003C	OPI1	P21957	404 aa		3.7	□□□□□ -1.82
PMI40	YER003C	KIN3	P22209	435 aa		3.7	□□□□□ -1.82
PMI40	YER003C	VMA16	P23968	213 aa		3.7	□□□□□ -1.82
PMI40	YER003C	RRP43	P25359	394 aa	Predicted RBP	3.7	□□□□□ -1.82
PMI40	YER003C	SOF1	P33750	489 aa	Known RBP	3.7	□□□□□ -1.82
PMI40	YER003C	LHS1	P36016	881 aa		3.7	□□□□□ -1.82
PMI40	YER003C	CST26	P38226	397 aa		3.7	□□□□□ -1.82
PMI40	YER003C	DIA4	P38705	446 aa	Predicted RBP	3.7	□□□□□ -1.82
PMI40	YER003C	ASG1	P40467	964 aa		3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms