RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W RSA3Q05942 220 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W VAC14Q06708 880 aa1.42□□□□□ -2.18
MSN5YDR335W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
MSN5YDR335W YPL191CQ08930 360 aa1.42□□□□□ -2.18
MSN5YDR335W YOR019WQ99248 730 aa1.42□□□□□ -2.18
MSN5YDR335W APN1P22936 367 aa1.42□□□□□ -2.18
MSN5YDR335W YSR3P23501 404 aa1.42□□□□□ -2.18
MSN5YDR335W CAD1P24813 409 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W ERG3P32353 365 aa1.42□□□□□ -2.18
MSN5YDR335W RRP1P35178 278 aaPredicted RBP1.42□□□□□ -2.18
MSN5YDR335W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
MSN5YDR335W TCD1P38756 429 aa1.42□□□□□ -2.18
MSN5YDR335W SFB3P38810 929 aa1.42□□□□□ -2.18
MSN5YDR335W PEX7P39108 375 aa1.42□□□□□ -2.18
MSN5YDR335W ALD5P40047 520 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W YTA12P40341 825 aa1.42□□□□□ -2.18
MSN5YDR335W IDS2P46958 469 aa1.42□□□□□ -2.18
MSN5YDR335W CTF18P49956 741 aa1.42□□□□□ -2.18
MSN5YDR335W PAN2P53010 1115 aaPredicted RBP1.42□□□□□ -2.18
MSN5YDR335W YGR111WP53265 400 aa1.42□□□□□ -2.18
MSN5YDR335W BRE5P53741 515 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W BUD22Q04347 519 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W RNH1Q04740 348 aa1.42□□□□□ -2.18
MSN5YDR335W ECM7Q06200 448 aa1.42□□□□□ -2.18
MSN5YDR335W CIR2Q08822 631 aa1.42□□□□□ -2.18
MSN5YDR335W AIM41Q12032 185 aa1.42□□□□□ -2.18
MSN5YDR335W LPX1Q12405 387 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W YBR182C-AQ8TGU6 64 aa1.42□□□□□ -2.18
MSN5YDR335W URB1P34241 1764 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W URA3P03962 267 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-LR1P0C2J4 438 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-FP0CX61 438 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-GR2P0CX62 438 aa1.42□□□□□ -2.18
MSN5YDR335W MTF2P10849 440 aa1.42□□□□□ -2.18
MSN5YDR335W PYC1P11154 1178 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W OM45P16547 393 aa1.42□□□□□ -2.18
MSN5YDR335W ERG8P24521 451 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-CP25383 438 aa1.42□□□□□ -2.18
MSN5YDR335W YCR051WP25631 222 aa1.42□□□□□ -2.18
MSN5YDR335W CAP1P28495 268 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W NTH1P32356 751 aa1.42□□□□□ -2.18
MSN5YDR335W COT1P32798 439 aa1.42□□□□□ -2.18
MSN5YDR335W GYP6P32806 458 aa1.42□□□□□ -2.18
MSN5YDR335W SEF1P34228 1148 aa1.42□□□□□ -2.18
MSN5YDR335W REV7P38927 245 aa1.42□□□□□ -2.18
MSN5YDR335W ZRG8P40021 1076 aa1.42□□□□□ -2.18
MSN5YDR335W PXA1P41909 870 aa1.42□□□□□ -2.18
MSN5YDR335W YJL107CP42947 387 aa1.42□□□□□ -2.18
MSN5YDR335W LIA1P47120 325 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W GLO1P50107 326 aa1.42□□□□□ -2.18
MSN5YDR335W YKR011CQ02209 353 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-DR2Q03483 438 aa1.42□□□□□ -2.18
MSN5YDR335W YLR345WQ06137 509 aa1.42□□□□□ -2.18
MSN5YDR335W YPS7Q06325 596 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-BQ12260 438 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-OR2Q12293 438 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-DR1Q12392 438 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-OR1Q12439 438 aa1.42□□□□□ -2.18
MSN5YDR335W ECM3Q99252 613 aa1.42□□□□□ -2.18
MSN5YDR335W TY2A-DR3Q99303 438 aa1.42□□□□□ -2.18
MSN5YDR335W SWI6P09959 803 aa1.41□□□□□ -2.18
MSN5YDR335W HSF1P10961 833 aa1.41□□□□□ -2.18
MSN5YDR335W OCA4P25366 362 aa1.41□□□□□ -2.18
MSN5YDR335W BEM1P29366 551 aa1.41□□□□□ -2.18
MSN5YDR335W SUR1P33300 382 aa1.41□□□□□ -2.18
MSN5YDR335W PFF1P38244 976 aa1.41□□□□□ -2.18
MSN5YDR335W AIM3P38266 947 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W LRO1P40345 661 aa1.41□□□□□ -2.18
MSN5YDR335W THI6P41835 540 aa1.41□□□□□ -2.18
MSN5YDR335W NOP9P47077 666 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W EMC2P47133 292 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W GYP7P48365 746 aa1.41□□□□□ -2.18
MSN5YDR335W AMA1P50082 593 aa1.41□□□□□ -2.18
MSN5YDR335W INP52P50942 1183 aa1.41□□□□□ -2.18
MSN5YDR335W TEL2P53038 688 aa1.41□□□□□ -2.18
MSN5YDR335W RAI1P53063 387 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W MTC3P53077 123 aa1.41□□□□□ -2.18
MSN5YDR335W YIP5P53108 310 aa1.41□□□□□ -2.18
MSN5YDR335W CAF130P53280 1122 aaPredicted RBP1.41□□□□□ -2.18
MSN5YDR335W TOF1P53840 1238 aa1.41□□□□□ -2.18
MSN5YDR335W AQR1P53943 586 aa1.41□□□□□ -2.18
MSN5YDR335W TIM11P81449 96 aaPredicted RBP1.41□□□□□ -2.18
MSN5YDR335W LEE1Q02799 301 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W DUS4Q06063 367 aa1.41□□□□□ -2.18
MSN5YDR335W TFC6Q06339 672 aa1.41□□□□□ -2.18
MSN5YDR335W RRP9Q06506 573 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W VPS36Q06696 566 aa1.41□□□□□ -2.18
MSN5YDR335W HBT1Q07653 1046 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
MSN5YDR335W DFG16Q99234 619 aa1.41□□□□□ -2.18
MSN5YDR335W PET122P10355 254 aa1.41□□□□□ -2.18
MSN5YDR335W UNG1P12887 359 aa1.41□□□□□ -2.18
MSN5YDR335W PWP1P21304 576 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W ARG1P22768 420 aa1.41□□□□□ -2.18
MSN5YDR335W DAL80P26343 269 aa1.41□□□□□ -2.18
MSN5YDR335W MVD1P32377 396 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W FRD1P32614 470 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W PMT1P33775 817 aa1.41□□□□□ -2.18
MSN5YDR335W YHL017WP38745 532 aa1.41□□□□□ -2.18
MSN5YDR335W FAD1P38913 306 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms