RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W SAP1P39955 897 aaKnown RBP4.45□□□□□ -1.7
HSP42YDR171W IDS2P46958 469 aa4.45□□□□□ -1.7
HSP42YDR171W MRK1P50873 501 aa4.45□□□□□ -1.7
HSP42YDR171W PXR1P53335 271 aaPredicted RBP4.45□□□□□ -1.7
HSP42YDR171W VMS1Q04311 632 aaKnown RBP4.45□□□□□ -1.7
HSP42YDR171W CTI6Q08923 506 aa4.45□□□□□ -1.7
HSP42YDR171W SMC6Q12749 1114 aa4.45□□□□□ -1.7
HSP42YDR171W CTT1P06115 562 aa4.44□□□□□ -1.7
HSP42YDR171W WHI2P12611 486 aa4.44□□□□□ -1.7
HSP42YDR171W PRP16P15938 1071 aaPredicted RBP4.44□□□□□ -1.7
HSP42YDR171W VPS34P22543 875 aa4.44□□□□□ -1.7
HSP42YDR171W SWC3P31376 625 aa4.44□□□□□ -1.7
HSP42YDR171W CNS1P33313 385 aa4.44□□□□□ -1.7
HSP42YDR171W APM3P38153 483 aa4.44□□□□□ -1.7
HSP42YDR171W PSY4P38193 441 aa4.44□□□□□ -1.7
HSP42YDR171W SDH8P38345 138 aa4.44□□□□□ -1.7
HSP42YDR171W ILM1P47155 203 aa4.44□□□□□ -1.7
HSP42YDR171W HCR1Q05775 265 aaKnown RBP4.44□□□□□ -1.7
HSP42YDR171W NOP6Q07623 225 aaKnown RBP4.44□□□□□ -1.7
HSP42YDR171W AAD4Q07747 329 aa4.44□□□□□ -1.7
HSP42YDR171W SAC3P46674 1301 aa4.44□□□□□ -1.7
HSP42YDR171W PMR1P13586 950 aa4.43□□□□□ -1.7
HSP42YDR171W SEC18P18759 758 aaKnown RBP4.43□□□□□ -1.7
HSP42YDR171W CDC5P32562 705 aa4.43□□□□□ -1.7
HSP42YDR171W ECM32P32644 1121 aaKnown RBP4.43□□□□□ -1.7
HSP42YDR171W HEL1P36113 551 aa4.43□□□□□ -1.7
HSP42YDR171W EFM2P38347 419 aa4.43□□□□□ -1.7
HSP42YDR171W OSH3P38713 996 aaKnown RBP4.43□□□□□ -1.7
HSP42YDR171W YHL041WP38730 149 aa4.43□□□□□ -1.7
HSP42YDR171W STT3P39007 718 aaKnown RBP4.43□□□□□ -1.7
HSP42YDR171W TRS85P46944 698 aa4.43□□□□□ -1.7
HSP42YDR171W YJR079WP47126 109 aa4.43□□□□□ -1.7
HSP42YDR171W NCS2P53923 493 aaPredicted RBP4.43□□□□□ -1.7
HSP42YDR171W BOP3P53958 396 aa4.43□□□□□ -1.7
HSP42YDR171W LGE1Q02796 332 aaKnown RBP4.43□□□□□ -1.7
HSP42YDR171W GFD1Q04839 188 aaKnown RBP4.43□□□□□ -1.7
HSP42YDR171W VAC14Q06708 880 aa4.43□□□□□ -1.7
HSP42YDR171W CRD1Q07560 283 aa4.43□□□□□ -1.7
HSP42YDR171W TMA16Q08687 178 aa4.43□□□□□ -1.7
HSP42YDR171W PCL8Q08966 492 aa4.43□□□□□ -1.7
HSP42YDR171W RPL7AP05737 244 aaKnown RBP4.42□□□□□ -1.7
HSP42YDR171W PIF1P07271 859 aa4.42□□□□□ -1.7
HSP42YDR171W KAR3P17119 729 aa4.42□□□□□ -1.7
HSP42YDR171W PMA2P19657 947 aa4.42□□□□□ -1.7
HSP42YDR171W CDC10P25342 322 aaKnown RBP4.42□□□□□ -1.7
HSP42YDR171W RRP43P25359 394 aaPredicted RBP4.42□□□□□ -1.7
HSP42YDR171W MRPL9P31334 269 aa4.42□□□□□ -1.7
HSP42YDR171W RAD5P32849 1169 aaPredicted RBP4.42□□□□□ -1.7
HSP42YDR171W NUP133P36161 1157 aa4.42□□□□□ -1.7
HSP42YDR171W ADE17P38009 592 aaKnown RBP4.42□□□□□ -1.7
HSP42YDR171W ARB1P40024 610 aaKnown RBP4.42□□□□□ -1.7
HSP42YDR171W SEC9P40357 651 aa4.42□□□□□ -1.7
HSP42YDR171W YFL015CP43578 164 aa4.42□□□□□ -1.7
HSP42YDR171W MIC19P43594 170 aa4.42□□□□□ -1.7
HSP42YDR171W SPO19Q03029 223 aa4.42□□□□□ -1.7
HSP42YDR171W YML119WQ03208 357 aa4.42□□□□□ -1.7
HSP42YDR171W VPS64Q03944 604 aa4.42□□□□□ -1.7
HSP42YDR171W ERV41Q04651 352 aa4.42□□□□□ -1.7
HSP42YDR171W SFH1Q06168 426 aa4.42□□□□□ -1.7
HSP42YDR171W ICL2Q12031 575 aa4.42□□□□□ -1.7
HSP42YDR171W RRP6Q12149 733 aaKnown RBP4.42□□□□□ -1.7
HSP42YDR171W RPL7BQ12213 244 aaKnown RBP4.42□□□□□ -1.7
HSP42YDR171W CDC8P00572 216 aa4.41□□□□□ -1.7
HSP42YDR171W AAC1P04710 309 aa4.41□□□□□ -1.7
HSP42YDR171W RAD1P06777 1100 aa4.41□□□□□ -1.7
HSP42YDR171W POL3P15436 1097 aa4.41□□□□□ -1.7
HSP42YDR171W APA1P16550 321 aaKnown RBP4.41□□□□□ -1.7
HSP42YDR171W OPI1P21957 404 aa4.41□□□□□ -1.7
HSP42YDR171W CDC60P26637 1090 aaKnown RBP4.41□□□□□ -1.7
HSP42YDR171W PEP3P27801 918 aa4.41□□□□□ -1.7
HSP42YDR171W SRB4P32569 687 aa4.41□□□□□ -1.7
HSP42YDR171W CUE2P36075 443 aaKnown RBP4.41□□□□□ -1.7
HSP42YDR171W ATF1P40353 525 aa4.41□□□□□ -1.7
HSP42YDR171W FYV8P46949 817 aaKnown RBP4.41□□□□□ -1.7
HSP42YDR171W ATG36P46983 293 aa4.41□□□□□ -1.7
HSP42YDR171W TAX4P47030 604 aa4.41□□□□□ -1.7
HSP42YDR171W YNL092WP53934 400 aa4.41□□□□□ -1.7
HSP42YDR171W CRF1Q04930 467 aa4.41□□□□□ -1.7
HSP42YDR171W CMS1Q07897 291 aaKnown RBP4.41□□□□□ -1.7
HSP42YDR171W SLK19Q08581 821 aaKnown RBP4.41□□□□□ -1.7
HSP42YDR171W ABP140Q08641 628 aaKnown RBP4.41□□□□□ -1.7
HSP42YDR171W RSF2P46974 1380 aa4.4□□□□□ -1.7
HSP42YDR171W HEM1P09950 548 aaPredicted RBP4.4□□□□□ -1.71
HSP42YDR171W KRS1P15180 591 aaKnown RBP4.4□□□□□ -1.71
HSP42YDR171W SWI4P25302 1093 aaKnown RBP4.4□□□□□ -1.71
HSP42YDR171W PRP45P28004 379 aaPredicted RBP4.4□□□□□ -1.71
HSP42YDR171W MCM4P30665 933 aaKnown RBP4.4□□□□□ -1.71
HSP42YDR171W DPH5P32469 300 aaPredicted RBP4.4□□□□□ -1.71
HSP42YDR171W PDB1P32473 366 aaKnown RBP4.4□□□□□ -1.71
HSP42YDR171W GDA1P32621 518 aa4.4□□□□□ -1.71
HSP42YDR171W YME2P32843 850 aa4.4□□□□□ -1.71
HSP42YDR171W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
HSP42YDR171W KTR3P38130 404 aaPredicted RBP4.4□□□□□ -1.71
HSP42YDR171W ARO9P38840 513 aaPredicted RBP4.4□□□□□ -1.71
HSP42YDR171W MTG2P38860 518 aa4.4□□□□□ -1.71
HSP42YDR171W LNP1P38878 278 aa4.4□□□□□ -1.71
HSP42YDR171W SPC72P39723 622 aa4.4□□□□□ -1.71
HSP42YDR171W MRX1P40050 688 aa4.4□□□□□ -1.71
HSP42YDR171W EFM4P40516 257 aa4.4□□□□□ -1.71
HSP42YDR171W YJL043WP47053 257 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms