RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C BRE1Q07457 700 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C MRN1Q08925 612 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
SEC1YDR164C PPT2Q12036 173 aa0.89□□□□□ -2.27
SEC1YDR164C YOL114CQ12322 202 aa0.89□□□□□ -2.27
SEC1YDR164C NOP56Q12460 504 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
SEC1YDR164C PGA3Q12746 312 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C ARO1P08566 1588 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C PEP1P32319 1579 aa0.89□□□□□ -2.27
SEC1YDR164C RPO31P04051 1460 aa0.89□□□□□ -2.27
SEC1YDR164C MYO4P32492 1471 aa0.89□□□□□ -2.27
SEC1YDR164C NUP159P40477 1460 aa0.89□□□□□ -2.27
SEC1YDR164C MHP1P43638 1398 aa0.89□□□□□ -2.27
SEC1YDR164C RPL42AP0CX27 106 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C RPL42BP0CX28 106 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C GLN4P13188 809 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C PCT1P13259 424 aa0.89□□□□□ -2.27
SEC1YDR164C BUD14P27637 709 aa0.89□□□□□ -2.27
SEC1YDR164C IMP2'P32351 346 aa0.89□□□□□ -2.27
SEC1YDR164C HXT4P32467 576 aa0.89□□□□□ -2.27
SEC1YDR164C RAD24P32641 659 aa0.89□□□□□ -2.27
SEC1YDR164C TRS65P32893 560 aa0.89□□□□□ -2.27
SEC1YDR164C MPE1P35728 441 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C ACA1P39970 489 aa0.89□□□□□ -2.27
SEC1YDR164C EAF5P39995 279 aa0.89□□□□□ -2.27
SEC1YDR164C EMP65P40085 556 aa0.89□□□□□ -2.27
SEC1YDR164C SAP185P40856 1058 aa0.89□□□□□ -2.27
SEC1YDR164C IES1P43579 692 aa0.89□□□□□ -2.27
SEC1YDR164C SLD3P53135 668 aa0.89□□□□□ -2.27
SEC1YDR164C PIB2P53191 635 aa0.89□□□□□ -2.27
SEC1YDR164C RSC1P53236 928 aa0.89□□□□□ -2.27
SEC1YDR164C CNM67P53865 581 aaKnown RBP0.89□□□□□ -2.27
SEC1YDR164C PTA1Q01329 785 aaPredicted RBP0.89□□□□□ -2.27
SEC1YDR164C MAK10Q02197 733 aa0.89□□□□□ -2.27
SEC1YDR164C VPS20Q04272 221 aa0.89□□□□□ -2.27
SEC1YDR164C SSP2Q08646 371 aa0.89□□□□□ -2.27
SEC1YDR164C DNF1P32660 1571 aa0.88□□□□□ -2.27
SEC1YDR164C YCF1P39109 1515 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C VTH1P40438 1549 aa0.88□□□□□ -2.27
SEC1YDR164C VTH2P40890 1549 aa0.88□□□□□ -2.27
SEC1YDR164C CAT8P39113 1433 aa0.88□□□□□ -2.27
SEC1YDR164C PDR11P40550 1411 aa0.88□□□□□ -2.27
SEC1YDR164C JIP3O13555 125 aa0.88□□□□□ -2.27
SEC1YDR164C HSP82P02829 709 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C SES1P07284 462 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C GUK1P15454 187 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C CDC23P16522 626 aa0.88□□□□□ -2.27
SEC1YDR164C LDB16P25587 256 aa0.88□□□□□ -2.27
SEC1YDR164C SSH4P32343 579 aa0.88□□□□□ -2.27
SEC1YDR164C RPN2P32565 945 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C SAC6P32599 642 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C PTH2P34222 208 aa0.88□□□□□ -2.27
SEC1YDR164C SWH1P35845 1188 aa0.88□□□□□ -2.27
SEC1YDR164C MIC60P36112 540 aa0.88□□□□□ -2.27
SEC1YDR164C MNN2P38069 597 aa0.88□□□□□ -2.27
SEC1YDR164C GDT1P38301 280 aaPredicted RBP0.88□□□□□ -2.27
SEC1YDR164C SPC72P39723 622 aa0.88□□□□□ -2.27
SEC1YDR164C YMR147WP40218 223 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C GSM1P42950 618 aa0.88□□□□□ -2.27
SEC1YDR164C EPL1P43572 832 aa0.88□□□□□ -2.27
SEC1YDR164C IRC5P43610 853 aa0.88□□□□□ -2.27
SEC1YDR164C ASK10P48361 1146 aa0.88□□□□□ -2.27
SEC1YDR164C RNR4P49723 345 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C YGL242CP53066 181 aa0.88□□□□□ -2.27
SEC1YDR164C DSD1P53095 428 aa0.88□□□□□ -2.27
SEC1YDR164C APJ1P53940 528 aa0.88□□□□□ -2.27
SEC1YDR164C YAT1P80235 687 aa0.88□□□□□ -2.27
SEC1YDR164C GTR1Q00582 310 aa0.88□□□□□ -2.27
SEC1YDR164C TRS130Q03660 1102 aa0.88□□□□□ -2.27
SEC1YDR164C YMR254CQ04838 102 aa0.88□□□□□ -2.27
SEC1YDR164C PSR2Q07949 397 aa0.88□□□□□ -2.27
SEC1YDR164C NGL1Q08213 363 aaKnown RBP0.88□□□□□ -2.27
SEC1YDR164C CWC2Q12046 339 aaPredicted RBP0.88□□□□□ -2.27
SEC1YDR164C NUR1Q12066 484 aa0.88□□□□□ -2.27
SEC1YDR164C RRI2Q12348 645 aa0.88□□□□□ -2.27
SEC1YDR164C YOL087CQ99247 1116 aa0.88□□□□□ -2.27
SEC1YDR164C LTE1P07866 1435 aa0.88□□□□□ -2.27
SEC1YDR164C YSP2Q06681 1438 aa0.88□□□□□ -2.27
SEC1YDR164C YML133CQ03099 1374 aa0.88□□□□□ -2.27
SEC1YDR164C YLL067CQ07888 1374 aa0.88□□□□□ -2.27
SEC1YDR164C YLL066CQ99208 1374 aa0.88□□□□□ -2.27
SEC1YDR164C ADH4P10127 382 aa0.87□□□□□ -2.27
SEC1YDR164C BIK1P11709 440 aa0.87□□□□□ -2.27
SEC1YDR164C PHO81P17442 1178 aa0.87□□□□□ -2.27
SEC1YDR164C MSM1P22438 575 aa0.87□□□□□ -2.27
SEC1YDR164C PHO3P24031 467 aa0.87□□□□□ -2.27
SEC1YDR164C MCM10P32354 571 aa0.87□□□□□ -2.27
SEC1YDR164C MF(ALPHA)2P32435 120 aa0.87□□□□□ -2.27
SEC1YDR164C RPN12P32496 274 aa0.87□□□□□ -2.27
SEC1YDR164C PET309P32522 965 aaPredicted RBP0.87□□□□□ -2.27
SEC1YDR164C SPT8P38915 602 aa0.87□□□□□ -2.27
SEC1YDR164C YEL068CP39977 110 aa0.87□□□□□ -2.27
SEC1YDR164C SCS2P40075 244 aaKnown RBP0.87□□□□□ -2.27
SEC1YDR164C IMA5P40884 581 aa0.87□□□□□ -2.27
SEC1YDR164C MAD2P40958 196 aa0.87□□□□□ -2.27
SEC1YDR164C ATG27P46989 271 aa0.87□□□□□ -2.27
SEC1YDR164C MAD3P47074 515 aa0.87□□□□□ -2.27
SEC1YDR164C BNA1P47096 177 aa0.87□□□□□ -2.27
SEC1YDR164C NPA3P47122 385 aa0.87□□□□□ -2.27
SEC1YDR164C PUS4P48567 403 aaKnown RBP0.87□□□□□ -2.27
SEC1YDR164C TAN1P53072 289 aaPredicted RBP0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms