RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	RCF2	P53721	224 aa		4.67	□□□□□ -1.66
APC4	YDR118W	PET117	Q02771	107 aa		4.67	□□□□□ -1.66
APC4	YDR118W	RPN9	Q04062	393 aa	Known RBP	4.67	□□□□□ -1.66
APC4	YDR118W	TAF11	Q04226	346 aa		4.67	□□□□□ -1.66
APC4	YDR118W	YPR084W	Q06821	456 aa		4.67	□□□□□ -1.66
APC4	YDR118W	PEX11	Q12462	236 aa		4.67	□□□□□ -1.66
APC4	YDR118W	SCH9	P11792	824 aa	Known RBP	4.66	□□□□□ -1.66
APC4	YDR118W	SST2	P11972	698 aa	Known RBP	4.66	□□□□□ -1.66
APC4	YDR118W	NSP1	P14907	823 aa	Known RBP	4.66	□□□□□ -1.66
APC4	YDR118W	PRP16	P15938	1071 aa	Predicted RBP	4.66	□□□□□ -1.66
APC4	YDR118W	DAL81	P21657	970 aa		4.66	□□□□□ -1.66
APC4	YDR118W	SIR1	P21691	654 aa		4.66	□□□□□ -1.66
APC4	YDR118W	BAS1	P22035	811 aa		4.66	□□□□□ -1.66
APC4	YDR118W	SIS1	P25294	352 aa	Known RBP	4.66	□□□□□ -1.66
APC4	YDR118W	MSH2	P25847	964 aa		4.66	□□□□□ -1.66
APC4	YDR118W	BEM1	P29366	551 aa		4.66	□□□□□ -1.66
APC4	YDR118W	PHA2	P32452	334 aa		4.66	□□□□□ -1.66
APC4	YDR118W	GCD11	P32481	527 aa	Known RBP	4.66	□□□□□ -1.66
APC4	YDR118W	NIP1	P32497	812 aa	Known RBP	4.66	□□□□□ -1.66
APC4	YDR118W	YSC84	P32793	468 aa		4.66	□□□□□ -1.66
APC4	YDR118W	MRE11	P32829	692 aa		4.66	□□□□□ -1.66
APC4	YDR118W	PET112	P33893	541 aa		4.66	□□□□□ -1.66
APC4	YDR118W	RRN3	P36070	627 aa		4.66	□□□□□ -1.66
APC4	YDR118W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
APC4	YDR118W	HSM3	P38348	480 aa		4.66	□□□□□ -1.66
APC4	YDR118W	SOH1	P38633	127 aa		4.66	□□□□□ -1.66
APC4	YDR118W	YTP1	P53584	459 aa		4.66	□□□□□ -1.66
APC4	YDR118W	TMN2	Q04562	672 aa		4.66	□□□□□ -1.66
APC4	YDR118W	YLR177W	Q06251	628 aa		4.66	□□□□□ -1.66
APC4	YDR118W	SYT1	Q06836	1226 aa		4.66	□□□□□ -1.66
APC4	YDR118W	YLR046C	Q12253	270 aa		4.66	□□□□□ -1.66
APC4	YDR118W	REV1	P12689	985 aa		4.65	□□□□□ -1.66
APC4	YDR118W	PRI2	P20457	528 aa		4.65	□□□□□ -1.66
APC4	YDR118W	GEX1	P25596	615 aa		4.65	□□□□□ -1.66
APC4	YDR118W	RPC19	P28000	142 aa	Known RBP	4.65	□□□□□ -1.66
APC4	YDR118W	AEP1	P32493	518 aa		4.65	□□□□□ -1.66
APC4	YDR118W	IMP3	P32899	183 aa	Predicted RBP	4.65	□□□□□ -1.66
APC4	YDR118W	YKL069W	P36088	180 aa		4.65	□□□□□ -1.66
APC4	YDR118W	GEX2	P36173	615 aa		4.65	□□□□□ -1.66
APC4	YDR118W	MAK5	P38112	773 aa	Predicted RBP	4.65	□□□□□ -1.66
APC4	YDR118W	RIM2	P38127	377 aa		4.65	□□□□□ -1.66
APC4	YDR118W	EXO1	P39875	702 aa		4.65	□□□□□ -1.66
APC4	YDR118W	HEM14	P40012	539 aa		4.65	□□□□□ -1.66
APC4	YDR118W	MGS1	P40151	587 aa		4.65	□□□□□ -1.66
APC4	YDR118W	RGI2	P40188	164 aa		4.65	□□□□□ -1.66
APC4	YDR118W	PAN6	P40459	309 aa		4.65	□□□□□ -1.66
APC4	YDR118W	SEC28	P40509	296 aa	Known RBP	4.65	□□□□□ -1.66
APC4	YDR118W	CHS6	P40955	746 aa		4.65	□□□□□ -1.66
APC4	YDR118W	OYE3	P41816	400 aa	Predicted RBP	4.65	□□□□□ -1.66
APC4	YDR118W	ARH1	P48360	493 aa		4.65	□□□□□ -1.66
APC4	YDR118W	CWC24	P53769	259 aa		4.65	□□□□□ -1.66
APC4	YDR118W	YNL058C	P53947	316 aa		4.65	□□□□□ -1.66
APC4	YDR118W	ADE12	P80210	433 aa	Known RBP	4.65	□□□□□ -1.66
APC4	YDR118W	PIR1	Q03178	341 aa		4.65	□□□□□ -1.66
APC4	YDR118W	PML39	Q03760	334 aa		4.65	□□□□□ -1.66
APC4	YDR118W	YDR109C	Q04585	715 aa		4.65	□□□□□ -1.66
APC4	YDR118W	ERF2	Q06551	359 aa		4.65	□□□□□ -1.66
APC4	YDR118W	ADY3	Q07732	790 aa		4.65	□□□□□ -1.66
APC4	YDR118W	SGO1	Q08490	590 aa		4.65	□□□□□ -1.66
APC4	YDR118W	TRE2	Q08693	809 aa		4.65	□□□□□ -1.66
APC4	YDR118W	CHS5	Q12114	671 aa	Known RBP	4.65	□□□□□ -1.66
APC4	YDR118W	YLR149C	Q99296	730 aa		4.65	□□□□□ -1.66
APC4	YDR118W	GLN4	P13188	809 aa	Known RBP	4.65	□□□□□ -1.67
APC4	YDR118W	PRP4	P20053	465 aa	Known RBP	4.65	□□□□□ -1.67
APC4	YDR118W	RAM1	P22007	431 aa		4.65	□□□□□ -1.67
APC4	YDR118W	CTF13	P35203	478 aa		4.65	□□□□□ -1.67
APC4	YDR118W	ALY1	P36117	915 aa		4.65	□□□□□ -1.67
APC4	YDR118W	YHR182W	P38870	785 aa		4.65	□□□□□ -1.67
APC4	YDR118W	YDR089W	P38966	869 aa		4.65	□□□□□ -1.67
APC4	YDR118W	TES1	P41903	349 aa	Known RBP	4.65	□□□□□ -1.67
APC4	YDR118W	FAA4	P47912	694 aa	Known RBP	4.65	□□□□□ -1.67
APC4	YDR118W	AIM14	P53109	570 aa		4.65	□□□□□ -1.67
APC4	YDR118W	IST1	P53843	298 aa	Predicted RBP	4.65	□□□□□ -1.67
APC4	YDR118W	TFB2	Q02939	513 aa		4.65	□□□□□ -1.67
APC4	YDR118W	HPT1	Q04178	221 aa	Known RBP	4.65	□□□□□ -1.67
APC4	YDR118W	GSF2	Q04697	403 aa	Known RBP	4.65	□□□□□ -1.67
APC4	YDR118W	APC9	Q12107	265 aa		4.65	□□□□□ -1.67
APC4	YDR118W	RMD5	Q12508	421 aa		4.65	□□□□□ -1.67
APC4	YDR118W	TSC13	Q99190	310 aa		4.65	□□□□□ -1.67
APC4	YDR118W	YPT6	Q99260	215 aa		4.65	□□□□□ -1.67
APC4	YDR118W	AMD1	P15274	810 aa	Known RBP	4.64	□□□□□ -1.67
APC4	YDR118W	RPB10	P22139	70 aa		4.64	□□□□□ -1.67
APC4	YDR118W	EMC1	P25574	760 aa		4.64	□□□□□ -1.67
APC4	YDR118W	YHR131C	P38835	850 aa		4.64	□□□□□ -1.67
APC4	YDR118W	YJR061W	P40355	935 aa		4.64	□□□□□ -1.67
APC4	YDR118W	ERG10	P41338	398 aa	Known RBP	4.64	□□□□□ -1.67
APC4	YDR118W	ARC1	P46672	376 aa	Known RBP	4.64	□□□□□ -1.67
APC4	YDR118W	SIP4	P46954	829 aa		4.64	□□□□□ -1.67
APC4	YDR118W	AIM23	P47015	356 aa		4.64	□□□□□ -1.67
APC4	YDR118W	MAD3	P47074	515 aa		4.64	□□□□□ -1.67
APC4	YDR118W	YJR120W	P47157	116 aa		4.64	□□□□□ -1.67
APC4	YDR118W	TEL2	P53038	688 aa		4.64	□□□□□ -1.67
APC4	YDR118W	COG1	P53079	417 aa		4.64	□□□□□ -1.67
APC4	YDR118W	IPI3	P53877	555 aa		4.64	□□□□□ -1.67
APC4	YDR118W	TVP15	Q03860	143 aa		4.64	□□□□□ -1.67
APC4	YDR118W	YDR132C	Q03900	495 aa		4.64	□□□□□ -1.67
APC4	YDR118W	CSN9	Q03981	162 aa		4.64	□□□□□ -1.67
APC4	YDR118W	YDR344C	Q05510	147 aa		4.64	□□□□□ -1.67
APC4	YDR118W	ENT2	Q05785	613 aa		4.64	□□□□□ -1.67
APC4	YDR118W	YPR114W	Q06107	315 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms