RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAF1	YBR279W	SNO4	Q04902	237 aa		5.24	□□□□□ -1.57
PAF1	YBR279W	MCH4	Q08268	501 aa		5.24	□□□□□ -1.57
PAF1	YBR279W	HSP33	Q08914	237 aa	Known RBP	5.24	□□□□□ -1.57
PAF1	YBR279W	HSP32	Q08992	237 aa		5.24	□□□□□ -1.57
PAF1	YBR279W	SKM1	Q12469	655 aa		5.24	□□□□□ -1.57
PAF1	YBR279W	YBR085C-A	O43137	85 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	RPB2	P08518	1224 aa	Known RBP	5.23	□□□□□ -1.57
PAF1	YBR279W	ADE17	P38009	592 aa	Known RBP	5.23	□□□□□ -1.57
PAF1	YBR279W	KTR3	P38130	404 aa	Predicted RBP	5.23	□□□□□ -1.57
PAF1	YBR279W	TOM71	P38825	639 aa	Known RBP	5.23	□□□□□ -1.57
PAF1	YBR279W	YJR061W	P40355	935 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	YIL024C	P40543	189 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	MNT3	P40549	630 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	BSC5	P53755	489 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	YNL144C	P53907	740 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	RSM28	Q03430	361 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	HXK2	P04807	486 aa	Known RBP	5.23	□□□□□ -1.57
PAF1	YBR279W	SRP54	P20424	541 aa	Known RBP	5.23	□□□□□ -1.57
PAF1	YBR279W	MRP20	P32387	263 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	SCO2	P38072	301 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	SPC97	P38863	823 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	CDC1	P40986	491 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	IME4	P41833	600 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	MRPL1	Q04599	285 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	SWF1	Q04629	336 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	AFT2	Q08957	416 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	RRI1	Q12468	440 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	YOL087C	Q99247	1116 aa		5.23	□□□□□ -1.57
PAF1	YBR279W	UBP13	P38187	747 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	VID27	P40157	782 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	CTK2	P46962	323 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	ECM22	Q05958	814 aa	Predicted RBP	5.22	□□□□□ -1.57
PAF1	YBR279W	YLR455W	Q06188	304 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	PSK2	Q08217	1101 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	PFA4	Q12006	378 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	NKP1	Q12493	238 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	YOR019W	Q99248	730 aa		5.22	□□□□□ -1.57
PAF1	YBR279W	CDC24	P11433	854 aa	Predicted RBP	5.21	□□□□□ -1.58
PAF1	YBR279W	CNA1	P23287	553 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	CHS3	P29465	1165 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	MCM10	P32354	571 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	ECM10	P39987	644 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	SLZ1	P40167	298 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	SWP82	P43554	623 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	ARC1	P46672	376 aa	Known RBP	5.21	□□□□□ -1.58
PAF1	YBR279W	PFA5	Q03289	374 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	PIG1	Q06216	648 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	SKG3	Q06315	1026 aa		5.21	□□□□□ -1.58
PAF1	YBR279W	RAP1	P11938	827 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	ALY1	P36117	915 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	ESL2	P36168	1195 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	PSD1	P39006	500 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	YMR124W	P39523	943 aa	Known RBP	5.2	□□□□□ -1.58
PAF1	YBR279W	SMC3	P47037	1230 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	VPS25	P47142	202 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	AAD10	P47182	288 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	MEP3	P53390	489 aa		5.2	□□□□□ -1.58
PAF1	YBR279W	YPR089W	O13585	888 aa		5.19	□□□□□ -1.58
PAF1	YBR279W	SPE2	P21182	396 aa		5.19	□□□□□ -1.58
PAF1	YBR279W	GFD2	P25370	566 aa	Known RBP	5.19	□□□□□ -1.58
PAF1	YBR279W	GLO1	P50107	326 aa		5.19	□□□□□ -1.58
PAF1	YBR279W	YOR111W	Q99210	232 aa		5.19	□□□□□ -1.58
PAF1	YBR279W	SAC1	P32368	623 aa	Known RBP	5.18	□□□□□ -1.58
PAF1	YBR279W	FLO5	P38894	1075 aa		5.18	□□□□□ -1.58
PAF1	YBR279W	TMA108	P40462	946 aa		5.18	□□□□□ -1.58
PAF1	YBR279W	PCI8	P40512	444 aa		5.18	□□□□□ -1.58
PAF1	YBR279W	PKP1	P40530	394 aa		5.18	□□□□□ -1.58
PAF1	YBR279W	DPB11	P47027	764 aa	Predicted RBP	5.18	□□□□□ -1.58
PAF1	YBR279W	YDL121C	Q07541	149 aa		5.18	□□□□□ -1.58
PAF1	YBR279W	GPN2	Q08726	347 aa	Predicted RBP	5.18	□□□□□ -1.58
PAF1	YBR279W	TCO89	Q08921	799 aa		5.18	□□□□□ -1.58
PAF1	YBR279W	ATX2	Q12067	313 aa		5.18	□□□□□ -1.58
PAF1	YBR279W	PET111	P08468	800 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	GPA1	P08539	472 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	YKL050C	P35736	922 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	AGP2	P38090	596 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	YBL029W	P38201	376 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	YNG2	P38806	282 aa	Known RBP	5.17	□□□□□ -1.58
PAF1	YBR279W	YPT11	P48559	417 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	NNF2	P53253	936 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	SEC5	P89102	971 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	PSR1	Q07800	427 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	APL4	Q12028	832 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	ENT1	Q12518	454 aa		5.17	□□□□□ -1.58
PAF1	YBR279W	KRS1	P15180	591 aa	Known RBP	5.16	□□□□□ -1.58
PAF1	YBR279W	TKL1	P23254	680 aa	Known RBP	5.16	□□□□□ -1.58
PAF1	YBR279W	MGM1	P32266	881 aa		5.16	□□□□□ -1.58
PAF1	YBR279W	UIP3	P39547	235 aa		5.16	□□□□□ -1.58
PAF1	YBR279W	SEC24	P40482	926 aa	Known RBP	5.16	□□□□□ -1.58
PAF1	YBR279W	DPH1	P40487	425 aa	Known RBP	5.16	□□□□□ -1.58
PAF1	YBR279W	SIP4	P46954	829 aa		5.16	□□□□□ -1.58
PAF1	YBR279W	PIL1	P53252	339 aa	Known RBP	5.16	□□□□□ -1.58
PAF1	YBR279W	INA17	Q02888	182 aa		5.16	□□□□□ -1.58
PAF1	YBR279W	POS5	Q06892	414 aa		5.16	□□□□□ -1.58
PAF1	YBR279W	GAL4	P04386	881 aa		5.15	□□□□□ -1.59
PAF1	YBR279W	VMA16	P23968	213 aa		5.15	□□□□□ -1.59
PAF1	YBR279W	ECM32	P32644	1121 aa	Known RBP	5.15	□□□□□ -1.59
PAF1	YBR279W	PXL1	P36166	706 aa		5.15	□□□□□ -1.59
PAF1	YBR279W	DIA4	P38705	446 aa	Predicted RBP	5.15	□□□□□ -1.59
PAF1	YBR279W	RTS1	P38903	757 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms