RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	CHO1	P08456	276 aa		4.89	□□□□□ -1.63
UBS1	YBR165W	UBC1	P21734	215 aa	Known RBP	4.89	□□□□□ -1.63
UBS1	YBR165W	MNN2	P38069	597 aa		4.89	□□□□□ -1.63
UBS1	YBR165W	LEU5	P38702	357 aa		4.89	□□□□□ -1.63
UBS1	YBR165W	ASI1	P54074	624 aa		4.89	□□□□□ -1.63
UBS1	YBR165W	CRN1	Q06440	651 aa		4.89	□□□□□ -1.63
UBS1	YBR165W	COX17	Q12287	69 aa		4.89	□□□□□ -1.63
UBS1	YBR165W	PET111	P08468	800 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-LR1	P0C2J4	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-F	P0CX61	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-GR2	P0CX62	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-C	P25383	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	GCS1	P35197	352 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	LHS1	P36016	881 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	NTR2	P36118	322 aa	Predicted RBP	4.88	□□□□□ -1.63
UBS1	YBR165W	SEC31	P38968	1273 aa	Known RBP	4.88	□□□□□ -1.63
UBS1	YBR165W	MRX1	P40050	688 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	SWP82	P43554	623 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	IZH1	Q03419	316 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-DR2	Q03483	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	YLR281C	Q05863	155 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	BLS1	Q06071	122 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	NEW1	Q08972	1196 aa	Known RBP	4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-B	Q12260	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-OR2	Q12293	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-DR1	Q12392	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-OR1	Q12439	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	TY2A-DR3	Q99303	438 aa		4.88	□□□□□ -1.63
UBS1	YBR165W	NUC1	P08466	329 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	MET30	P39014	640 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	YIL169C	P40442	995 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	CTK2	P46962	323 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	COG1	P53079	417 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	ECM16	Q04217	1267 aa	Known RBP	4.87	□□□□□ -1.63
UBS1	YBR165W	GRS2	Q06817	618 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	NDD1	Q08887	554 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	PCD1	Q12524	340 aa		4.87	□□□□□ -1.63
UBS1	YBR165W	TPK1	P06244	397 aa		4.86	□□□□□ -1.63
UBS1	YBR165W	SRB5	P32585	307 aa		4.86	□□□□□ -1.63
UBS1	YBR165W	XRS2	P33301	854 aa		4.86	□□□□□ -1.63
UBS1	YBR165W	IFA38	P38286	347 aa		4.86	□□□□□ -1.63
UBS1	YBR165W	BET4	Q00618	327 aa		4.86	□□□□□ -1.63
UBS1	YBR165W	CSR1	Q06705	408 aa	Known RBP	4.86	□□□□□ -1.63
UBS1	YBR165W	TMA16	Q08687	178 aa		4.86	□□□□□ -1.63
UBS1	YBR165W	TKL1	P23254	680 aa	Known RBP	4.85	□□□□□ -1.63
UBS1	YBR165W	DBF20	P32328	564 aa		4.85	□□□□□ -1.63
UBS1	YBR165W	SOF1	P33750	489 aa	Known RBP	4.85	□□□□□ -1.63
UBS1	YBR165W	TFC3	P34111	1160 aa		4.85	□□□□□ -1.63
UBS1	YBR165W	RKM3	P38222	552 aa		4.85	□□□□□ -1.63
UBS1	YBR165W	CTF18	P49956	741 aa		4.85	□□□□□ -1.63
UBS1	YBR165W	ESBP6	P53918	673 aa		4.85	□□□□□ -1.63
UBS1	YBR165W	PFA5	Q03289	374 aa		4.85	□□□□□ -1.63
UBS1	YBR165W	RSM28	Q03430	361 aa		4.85	□□□□□ -1.63
UBS1	YBR165W	SAC1	P32368	623 aa	Known RBP	4.84	□□□□□ -1.63
UBS1	YBR165W	ECM10	P39987	644 aa		4.84	□□□□□ -1.63
UBS1	YBR165W	YAT2	P40017	923 aa		4.84	□□□□□ -1.63
UBS1	YBR165W	IST3	P40565	148 aa	Predicted RBP	4.84	□□□□□ -1.63
UBS1	YBR165W	PSP1	P50896	841 aa	Known RBP	4.84	□□□□□ -1.63
UBS1	YBR165W	YMR254C	Q04838	102 aa		4.84	□□□□□ -1.63
UBS1	YBR165W	GPN2	Q08726	347 aa	Predicted RBP	4.84	□□□□□ -1.63
UBS1	YBR165W	CBP1	P07252	654 aa		4.83	□□□□□ -1.64
UBS1	YBR165W	CLB2	P24869	491 aa		4.83	□□□□□ -1.64
UBS1	YBR165W	EFM2	P38347	419 aa		4.83	□□□□□ -1.64
UBS1	YBR165W	SMK1	P41808	388 aa		4.83	□□□□□ -1.64
UBS1	YBR165W	DIG1	Q03063	452 aa	Known RBP	4.83	□□□□□ -1.64
UBS1	YBR165W	ARP10	Q04549	284 aa		4.83	□□□□□ -1.64
UBS1	YBR165W	UTP21	Q06078	939 aa	Predicted RBP	4.83	□□□□□ -1.64
UBS1	YBR165W	APL5	Q08951	932 aa	Known RBP	4.83	□□□□□ -1.64
UBS1	YBR165W	VCX1	Q99385	411 aa		4.83	□□□□□ -1.64
UBS1	YBR165W	RAP1	P11938	827 aa		4.82	□□□□□ -1.64
UBS1	YBR165W	YND1	P40009	630 aa		4.82	□□□□□ -1.64
UBS1	YBR165W	IML2	P47031	731 aa		4.82	□□□□□ -1.64
UBS1	YBR165W	YNL181W	P53878	407 aa		4.82	□□□□□ -1.64
UBS1	YBR165W	ERG27	Q12452	347 aa	Known RBP	4.82	□□□□□ -1.64
UBS1	YBR165W	RAD16	P31244	790 aa		4.81	□□□□□ -1.64
UBS1	YBR165W	PTH2	P34222	208 aa		4.81	□□□□□ -1.64
UBS1	YBR165W	RTT107	P38850	1070 aa		4.81	□□□□□ -1.64
UBS1	YBR165W	TPM2	P40414	161 aa		4.81	□□□□□ -1.64
UBS1	YBR165W	RRT6	P53117	311 aa	Predicted RBP	4.81	□□□□□ -1.64
UBS1	YBR165W	YNR061C	P53747	219 aa		4.81	□□□□□ -1.64
UBS1	YBR165W	MAK10	Q02197	733 aa		4.81	□□□□□ -1.64
UBS1	YBR165W	MCP2	Q06567	569 aa		4.81	□□□□□ -1.64
UBS1	YBR165W	KRS1	P15180	591 aa	Known RBP	4.8	□□□□□ -1.64
UBS1	YBR165W	CDC23	P16522	626 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	IES5	P40060	125 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	SAP185	P40856	1058 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	HXT9	P40885	567 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	MAF1	P41910	395 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	BNA1	P47096	177 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	FMP42	Q04991	504 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	NRT1	Q08485	598 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	YOR111W	Q99210	232 aa		4.8	□□□□□ -1.64
UBS1	YBR165W	YPK3	P38070	525 aa		4.79	□□□□□ -1.64
UBS1	YBR165W	PFK26	P40433	827 aa	Known RBP	4.79	□□□□□ -1.64
UBS1	YBR165W	VPS4	P52917	437 aa		4.79	□□□□□ -1.64
UBS1	YBR165W	YTP1	P53584	459 aa		4.79	□□□□□ -1.64
UBS1	YBR165W	IST1	P53843	298 aa	Predicted RBP	4.79	□□□□□ -1.64
UBS1	YBR165W	CTL1	Q03220	320 aa	Known RBP	4.79	□□□□□ -1.64
UBS1	YBR165W	FCP1	Q03254	732 aa		4.79	□□□□□ -1.64
UBS1	YBR165W	ERG8	P24521	451 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms