RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11B	YBR048W	JHD1	P40034	492 aa		4.01	□□□□□ -1.77
RPS11B	YBR048W	SEC24	P40482	926 aa	Known RBP	4.01	□□□□□ -1.77
RPS11B	YBR048W	NPA3	P47122	385 aa		4.01	□□□□□ -1.77
RPS11B	YBR048W	YGL036W	P53185	909 aa	Predicted RBP	4.01	□□□□□ -1.77
RPS11B	YBR048W	ECM22	Q05958	814 aa	Predicted RBP	4.01	□□□□□ -1.77
RPS11B	YBR048W	CRN1	Q06440	651 aa		4.01	□□□□□ -1.77
RPS11B	YBR048W	GPN2	Q08726	347 aa	Predicted RBP	4.01	□□□□□ -1.77
RPS11B	YBR048W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
RPS11B	YBR048W	ZPS1	Q12512	249 aa		4.01	□□□□□ -1.77
RPS11B	YBR048W	SMC6	Q12749	1114 aa		4.01	□□□□□ -1.77
RPS11B	YBR048W	YPT6	Q99260	215 aa		4.01	□□□□□ -1.77
RPS11B	YBR048W	Q0010	Q9ZZX9	128 aa		4.01	□□□□□ -1.77
RPS11B	YBR048W	COX1	P00401	534 aa		4	□□□□□ -1.77
RPS11B	YBR048W	OPI1	P21957	404 aa		4	□□□□□ -1.77
RPS11B	YBR048W	DBF4	P32325	704 aa		4	□□□□□ -1.77
RPS11B	YBR048W	SIP1	P32578	815 aa		4	□□□□□ -1.77
RPS11B	YBR048W	KTR3	P38130	404 aa	Predicted RBP	4	□□□□□ -1.77
RPS11B	YBR048W	VBA2	P38358	474 aa	Known RBP	4	□□□□□ -1.77
RPS11B	YBR048W	SMF1	P38925	575 aa		4	□□□□□ -1.77
RPS11B	YBR048W	CCT6	P39079	546 aa		4	□□□□□ -1.77
RPS11B	YBR048W	BDH2	P39713	417 aa		4	□□□□□ -1.77
RPS11B	YBR048W	YEL057C	P39983	233 aa		4	□□□□□ -1.77
RPS11B	YBR048W	SWP82	P43554	623 aa		4	□□□□□ -1.77
RPS11B	YBR048W	CPR8	P53728	308 aa		4	□□□□□ -1.77
RPS11B	YBR048W	ZDS2	P54786	942 aa		4	□□□□□ -1.77
RPS11B	YBR048W	YAT1	P80235	687 aa		4	□□□□□ -1.77
RPS11B	YBR048W	TAF3	Q12297	353 aa		4	□□□□□ -1.77
RPS11B	YBR048W	AI5_ALPHA	Q9ZZX1	630 aa		4	□□□□□ -1.77
RPS11B	YBR048W	PCT1	P13259	424 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	YIH1	P25637	258 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	LAC1	P28496	418 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	TRM2	P33753	639 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	UBP11	P36026	717 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	NTR2	P36118	322 aa	Predicted RBP	3.99	□□□□□ -1.77
RPS11B	YBR048W	YMC2	P38087	329 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	VID24	P38263	362 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	DIA4	P38705	446 aa	Predicted RBP	3.99	□□□□□ -1.77
RPS11B	YBR048W	APE4	P38821	490 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	UIP3	P39547	235 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	PMT6	P42934	759 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	UBX6	P47049	396 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	YGL117W	P53133	265 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	IST1	P53843	298 aa	Predicted RBP	3.99	□□□□□ -1.77
RPS11B	YBR048W	BOP3	P53958	396 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	UBP16	Q02863	499 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	YDR109C	Q04585	715 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	PSR1	Q07800	427 aa		3.99	□□□□□ -1.77
RPS11B	YBR048W	GET3	Q12154	354 aa	Known RBP	3.99	□□□□□ -1.77
RPS11B	YBR048W	SES1	P07284	462 aa	Known RBP	3.98	□□□□□ -1.77
RPS11B	YBR048W	ILS1	P09436	1072 aa	Known RBP	3.98	□□□□□ -1.77
RPS11B	YBR048W	ADH7	P25377	361 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	POL4	P25615	582 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	ADK2	P26364	225 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	REG2	P38232	338 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	CBR1	P38626	284 aa	Known RBP	3.98	□□□□□ -1.77
RPS11B	YBR048W	PCL5	P38794	229 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	MIT1	P40002	666 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	MRX1	P40050	688 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	YJL068C	P40363	299 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	OPT1	P40897	799 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	LYS4	P49367	693 aa	Predicted RBP	3.98	□□□□□ -1.77
RPS11B	YBR048W	COG2	P53271	262 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	YML119W	Q03208	357 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	RSM28	Q03430	361 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	TRS23	Q03784	219 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	RAD33	Q04231	177 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	RQC1	Q05468	723 aa	Known RBP	3.98	□□□□□ -1.77
RPS11B	YBR048W	SWA2	Q06677	668 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	RIM20	Q12033	661 aa		3.98	□□□□□ -1.77
RPS11B	YBR048W	YMR084W	A2P2R3	262 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	RNR3	P21672	869 aa	Known RBP	3.97	□□□□□ -1.77
RPS11B	YBR048W	VMA16	P23968	213 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	SYN8	P31377	255 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	GDA1	P32621	518 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	TOA1	P32773	286 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	MRE11	P32829	692 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	SEC66	P33754	206 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	SRO77	P38163	1010 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	MTG2	P38860	518 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	ASG1	P40467	964 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	TDA10	P42938	290 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	CCT7	P42943	550 aa	Known RBP	3.97	□□□□□ -1.77
RPS11B	YBR048W	VID30	P53076	958 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	YNL058C	P53947	316 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	ADE16	P54113	591 aa	Known RBP	3.97	□□□□□ -1.77
RPS11B	YBR048W	YML037C	Q03703	340 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	BUD22	Q04347	519 aa	Known RBP	3.97	□□□□□ -1.77
RPS11B	YBR048W	PLM2	Q04383	521 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	YLR345W	Q06137	509 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	ETT1	Q08421	412 aa	Known RBP	3.97	□□□□□ -1.77
RPS11B	YBR048W	ACF2	Q12168	779 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	AVL9	Q12500	764 aa		3.97	□□□□□ -1.77
RPS11B	YBR048W	PMS1	P14242	873 aa		3.96	□□□□□ -1.78
RPS11B	YBR048W	PMA2	P19657	947 aa		3.96	□□□□□ -1.78
RPS11B	YBR048W	YJU2	P28320	278 aa	Predicted RBP	3.96	□□□□□ -1.78
RPS11B	YBR048W	SOF1	P33750	489 aa	Known RBP	3.96	□□□□□ -1.78
RPS11B	YBR048W	JEM1	P40358	645 aa		3.96	□□□□□ -1.78
RPS11B	YBR048W	PKP1	P40530	394 aa		3.96	□□□□□ -1.78
RPS11B	YBR048W	CTK2	P46962	323 aa		3.96	□□□□□ -1.78
RPS11B	YBR048W	SMC3	P47037	1230 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms