RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 CENPFP49454 3210 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 TRIM6-TRIM34B2RNG4 842 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 CNMDO75829 334 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 INHAP05111 366 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 CCL5P13501 91 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 EEF2P13639 858 aaKnown RBP18.14■□□□□ 0.49
ERCC1-213ENST00000592023 Q3C1V9 767 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 CCAR1Q8IX12 1150 aaKnown RBP18.14■□□□□ 0.49
ERCC1-213ENST00000592023 VCPKMTQ9H867 229 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 KANSL2Q9H9L4 492 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 CWC22Q9HCG8 908 aaKnown RBP18.14■□□□□ 0.49
ERCC1-213ENST00000592023 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.49
ERCC1-213ENST00000592023 PRDM1O75626 825 aa18.13■□□□□ 0.49
ERCC1-213ENST00000592023 MAPK4P31152 587 aa18.13■□□□□ 0.49
ERCC1-213ENST00000592023 PXYLP1Q8TE99 480 aa18.13■□□□□ 0.49
ERCC1-213ENST00000592023 LPAR1Q92633 364 aa18.13■□□□□ 0.49
ERCC1-213ENST00000592023 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.13■□□□□ 0.49
ERCC1-213ENST00000592023 PARP14Q460N5 1801 aa18.13■□□□□ 0.49
ERCC1-213ENST00000592023 RLFQ13129 1914 aa18.13■□□□□ 0.49
ERCC1-213ENST00000592023 KIAA0100Q14667 2235 aaKnown RBP18.13■□□□□ 0.49
ERCC1-213ENST00000592023 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 FOXP2O15409 715 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 RAD21O60216 631 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 PPARAQ07869 468 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
ERCC1-213ENST00000592023 LBX2Q6XYB7 198 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 GPR142Q7Z601 462 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 SOCS4Q8WXH5 440 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 RNF208Q9H0X6 261 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 UNC93B1Q9H1C4 597 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 BTBD7Q9P203 1132 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 GJD2Q9UKL4 321 aa18.12■□□□□ 0.49
ERCC1-213ENST00000592023 WDR46O15213 610 aaKnown RBP18.11■□□□□ 0.49
ERCC1-213ENST00000592023 FLOT1O75955 427 aa18.11■□□□□ 0.49
ERCC1-213ENST00000592023 CCNA1P78396 465 aa18.11■□□□□ 0.49
ERCC1-213ENST00000592023 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
ERCC1-213ENST00000592023 SHISA4Q96DD7 197 aa18.11■□□□□ 0.49
ERCC1-213ENST00000592023 NUDT12Q9BQG2 462 aa18.11■□□□□ 0.49
ERCC1-213ENST00000592023 ZNF287Q9HBT7 754 aa18.11■□□□□ 0.49
ERCC1-213ENST00000592023 HELLSQ9NRZ9 838 aa18.11■□□□□ 0.49
ERCC1-213ENST00000592023 MYH4Q9Y623 1939 aa18.1■□□□□ 0.49
ERCC1-213ENST00000592023 CYP2B6P20813 491 aa18.1■□□□□ 0.49
ERCC1-213ENST00000592023 NMIQ13287 307 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-213ENST00000592023 COG2Q14746 738 aa18.1■□□□□ 0.49
ERCC1-213ENST00000592023 PLEKHH3Q7Z736 793 aa18.1■□□□□ 0.49
ERCC1-213ENST00000592023 ZNF444Q8N0Y2 327 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-213ENST00000592023 GOPCQ9HD26 462 aa18.1■□□□□ 0.49
ERCC1-213ENST00000592023 HMGCRP04035 888 aa18.09■□□□□ 0.49
ERCC1-213ENST00000592023 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
ERCC1-213ENST00000592023 PDE4BQ07343 736 aa18.09■□□□□ 0.49
ERCC1-213ENST00000592023 TRIB2Q92519 343 aa18.09■□□□□ 0.49
ERCC1-213ENST00000592023 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
ERCC1-213ENST00000592023 OSBPL3Q9H4L5 887 aa18.09■□□□□ 0.49
ERCC1-213ENST00000592023 PLIN4Q96Q06 1357 aa18.08■□□□□ 0.49
ERCC1-213ENST00000592023 BRCA2P51587 3418 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 GJB1P08034 283 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 DSG3P32926 999 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 TRIM32Q13049 653 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 FAM83BQ5T0W9 1011 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 ZNF589Q86UQ0 364 aaPredicted RBP18.08■□□□□ 0.48
ERCC1-213ENST00000592023 NKX2-3Q8TAU0 364 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 CEP95Q96GE4 821 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
ERCC1-213ENST00000592023 COL11A1P12107 1806 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-213ENST00000592023 TNRC18O15417 2968 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-213ENST00000592023 CCDC171Q6TFL3 1326 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 IGKV6D-41A0A0C4DH26 115 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 RGS2P41220 211 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 GJA8P48165 433 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 PLS1Q14651 629 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 FAM47AQ5JRC9 791 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 MORN1Q5T089 497 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 LRRC47Q8N1G4 583 aaKnown RBP18.07■□□□□ 0.48
ERCC1-213ENST00000592023 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
ERCC1-213ENST00000592023 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-213ENST00000592023 APBA2Q99767 749 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 FBXO28Q9NVF7 368 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 NYAP2Q9P242 653 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
ERCC1-213ENST00000592023 ZKSCAN1P17029 563 aaPredicted RBP18.06■□□□□ 0.48
ERCC1-213ENST00000592023 SDSP20132 328 aa18.06■□□□□ 0.48
ERCC1-213ENST00000592023 MB21D1Q8N884 522 aa18.06■□□□□ 0.48
ERCC1-213ENST00000592023 USP6NLQ92738 828 aa18.06■□□□□ 0.48
ERCC1-213ENST00000592023 DEFB118Q96PH6 123 aa18.06■□□□□ 0.48
ERCC1-213ENST00000592023 MOV10L1Q9BXT6 1211 aaKnown RBP18.06■□□□□ 0.48
ERCC1-213ENST00000592023 SPATC1LQ9H0A9 340 aa18.06■□□□□ 0.48
ERCC1-213ENST00000592023 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.06■□□□□ 0.48
ERCC1-213ENST00000592023 CLIP2Q9UDT6 1046 aa18.06■□□□□ 0.48
ERCC1-213ENST00000592023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.06■□□□□ 0.48
ERCC1-213ENST00000592023 IVNS1ABPQ9Y6Y0 642 aa18.06■□□□□ 0.48
ERCC1-213ENST00000592023 NDUFB10O96000 172 aa18.05■□□□□ 0.48
ERCC1-213ENST00000592023 PTPREP23469 700 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms