RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 EEF2P13639 858 aaKnown RBP16.41■□□□□ 0.22
RPRD1A-206ENST00000588459 RASA1P20936 1047 aa16.41■□□□□ 0.22
RPRD1A-206ENST00000588459 UBXN2AP68543 259 aa16.41■□□□□ 0.22
RPRD1A-206ENST00000588459 CHD1LQ86WJ1 897 aa16.41■□□□□ 0.22
RPRD1A-206ENST00000588459 MKNK2Q9HBH9 465 aa16.41■□□□□ 0.22
RPRD1A-206ENST00000588459 PRDM1O75626 825 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 NUCB1Q02818 461 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 RNF208Q9H0X6 261 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 UNC93B1Q9H1C4 597 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 BTBD7Q9P203 1132 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 GJD2Q9UKL4 321 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 TMX2Q9Y320 296 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 RABGAP1Q9Y3P9 1069 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 RLFQ13129 1914 aa16.4■□□□□ 0.22
RPRD1A-206ENST00000588459 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 RAD21O60216 631 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 MAPK4P31152 587 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 PXYLP1Q8TE99 480 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 SHISA4Q96DD7 197 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 NAPBQ9H115 298 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 A0A0G2JMZ2 1700 aa16.39■□□□□ 0.21
RPRD1A-206ENST00000588459 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 FOXP2O15409 715 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 CYP2B6P20813 491 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 VPS53Q5VIR6 699 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 WDR78Q5VTH9 848 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 GPR142Q7Z601 462 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 FAM227BQ96M60 508 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
RPRD1A-206ENST00000588459 FLOT1O75955 427 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 PPARAQ07869 468 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 TRIM32Q13049 653 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 COG2Q14746 738 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 PLEKHH3Q7Z736 793 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 LPAR1Q92633 364 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 NUDT12Q9BQG2 462 aa16.37■□□□□ 0.21
RPRD1A-206ENST00000588459 WDR46O15213 610 aaKnown RBP16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 HMGCRP04035 888 aa16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 CCNA1P78396 465 aa16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 TRIB2Q92519 343 aa16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 GOPCQ9HD26 462 aa16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
RPRD1A-206ENST00000588459 COL11A1P12107 1806 aaPredicted RBP16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 GJB1P08034 283 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 DSG3P32926 999 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 GJA8P48165 433 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 PDE4BQ07343 736 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 FAM47AQ5JRC9 791 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 MORN1Q5T089 497 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 U2AF1L4Q8WU68 220 aaKnown RBP16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 ZNF287Q9HBT7 754 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 FBXO28Q9NVF7 368 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 HOXC10Q9NYD6 342 aa16.35■□□□□ 0.21
RPRD1A-206ENST00000588459 IGKV6D-41A0A0C4DH26 115 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 RGS2P41220 211 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 PLS1Q14651 629 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 CCL14Q16627 93 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 USP6NLQ92738 828 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 DEFB118Q96PH6 123 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 NUP88Q99567 741 aaPredicted RBP16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 OSBPL3Q9H4L5 887 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 NYAP2Q9P242 653 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 CLIP2Q9UDT6 1046 aa16.34■□□□□ 0.21
RPRD1A-206ENST00000588459 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 ZKSCAN1P17029 563 aaPredicted RBP16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 APBA2Q99767 749 aa16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 MOV10L1Q9BXT6 1211 aaKnown RBP16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 PAK6Q9NQU5 681 aaPredicted RBP16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
RPRD1A-206ENST00000588459 SGPL1O95470 568 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 NDUFB10O96000 172 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 SDSP20132 328 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 PTPREP23469 700 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms