RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 CRKP46108 304 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 GNL2Q13823 731 aaKnown RBP13.41□□□□□ -0.26
PCAT1-202ENST00000561978 NTRK3Q16288 839 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
PCAT1-202ENST00000561978 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 RAB11FIP4Q86YS3 637 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 UBAC1Q9BSL1 405 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 SERPINA10Q9UK55 444 aa13.41□□□□□ -0.26
PCAT1-202ENST00000561978 MINDY4BA8MYZ0 360 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 SPTLC2O15270 562 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
PCAT1-202ENST00000561978 TPM3P06753 285 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 ANGEL2Q5VTE6 544 aaKnown RBP13.4□□□□□ -0.26
PCAT1-202ENST00000561978 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 DZIP1Q86YF9 867 aaKnown RBP13.4□□□□□ -0.26
PCAT1-202ENST00000561978 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
PCAT1-202ENST00000561978 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.26
PCAT1-202ENST00000561978 TEKT1Q969V4 418 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 INCENPQ9NQS7 918 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 SUGT1Q9Y2Z0 365 aa13.4□□□□□ -0.26
PCAT1-202ENST00000561978 FMNL1O95466 1100 aaPredicted RBP13.4□□□□□ -0.27
PCAT1-202ENST00000561978 NT5C2P49902 561 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 MECOMQ03112 1051 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 FMR1Q06787 632 aaKnown RBP eCLIP13.4□□□□□ -0.27
PCAT1-202ENST00000561978 SNW1Q13573 536 aaKnown RBP13.4□□□□□ -0.27
PCAT1-202ENST00000561978 RTN1Q16799 776 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 ANO1Q5XXA6 986 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 KRT40Q6A162 431 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 ADGRA1Q86SQ6 560 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 JMYQ8N9B5 988 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 FSIP1Q8NA03 581 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 ENGASEQ8NFI3 743 aa13.4□□□□□ -0.27
PCAT1-202ENST00000561978 NSUN4Q96CB9 384 aaKnown RBP13.4□□□□□ -0.27
PCAT1-202ENST00000561978 FTOQ9C0B1 505 aaKnown RBP eCLIP13.4□□□□□ -0.27
PCAT1-202ENST00000561978 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.27
PCAT1-202ENST00000561978 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
PCAT1-202ENST00000561978 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCAT1-202ENST00000561978 ANO6Q4KMQ2 910 aa13.39□□□□□ -0.27
PCAT1-202ENST00000561978 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
PCAT1-202ENST00000561978 SDR42E1Q8WUS8 393 aa13.39□□□□□ -0.27
PCAT1-202ENST00000561978 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
PCAT1-202ENST00000561978 ZFP91Q96JP5 570 aaPredicted RBP13.39□□□□□ -0.27
PCAT1-202ENST00000561978 GLIS2Q9BZE0 524 aaPredicted RBP13.39□□□□□ -0.27
PCAT1-202ENST00000561978 CRNKL1Q9BZJ0 848 aaKnown RBP13.39□□□□□ -0.27
PCAT1-202ENST00000561978 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
PCAT1-202ENST00000561978 GOLGA6L6A8MZA4 724 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 TRAF5O00463 557 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
PCAT1-202ENST00000561978 FGRP09769 529 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 RXRAP19793 462 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCAT1-202ENST00000561978 ZC3H15Q8WU90 426 aaKnown RBP13.38□□□□□ -0.27
PCAT1-202ENST00000561978 PHKBQ93100 1093 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 SLC26A6Q9BXS9 759 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
PCAT1-202ENST00000561978 ATP8A2Q9NTI2 1148 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 CLIC4Q9Y696 253 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 TACC3Q9Y6A5 838 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 ZNF165P49910 485 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 MMP14P50281 582 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 CACNB3P54284 484 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 SLC39A14Q15043 492 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 STX1AQ16623 288 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 APOBEC3HQ6NTF7 200 aaKnown RBP13.38□□□□□ -0.27
PCAT1-202ENST00000561978 KRT26Q7Z3Y9 468 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 IQCA1Q86XH1 822 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 MTMR14Q8NCE2 650 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 DCPSQ96C86 337 aaKnown RBP13.38□□□□□ -0.27
PCAT1-202ENST00000561978 GOLPH3LQ9H4A5 285 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 CBX8Q9HC52 389 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
PCAT1-202ENST00000561978 ADM5C9JUS6 153 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 PPP6R2O75170 966 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 DEXIO95424 95 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 ITGBL1O95965 494 aaPredicted RBP13.37□□□□□ -0.27
PCAT1-202ENST00000561978 CALM1P0DP23 149 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 CALM2P0DP24 149 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 CALM3P0DP25 149 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 HDLBPQ00341 1268 aaKnown RBP13.37□□□□□ -0.27
PCAT1-202ENST00000561978 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 ZNF654Q8IZM8 581 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 FMR1NBQ8N0W7 255 aaPredicted RBP13.37□□□□□ -0.27
PCAT1-202ENST00000561978 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 ZDHHC15Q96MV8 337 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 ECM29Q5VYK3 1845 aa13.37□□□□□ -0.27
PCAT1-202ENST00000561978 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
PCAT1-202ENST00000561978 MYO1BO43795 1136 aa13.36□□□□□ -0.27
PCAT1-202ENST00000561978 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
PCAT1-202ENST00000561978 CMA1P23946 247 aa13.36□□□□□ -0.27
PCAT1-202ENST00000561978 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms