RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 SNHG28P0DPA3 235 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 LMNB1P20700 586 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 PFKFB3Q16875 520 aaPredicted RBP16.73■□□□□ 0.27
ZEB1-218ENST00000560196 MYSM1Q5VVJ2 828 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 CCDC82Q8N4S0 544 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 MKL1Q969V6 931 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 CSRNP1Q96S65 589 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 FOXP1Q9H334 677 aaPredicted RBP16.73■□□□□ 0.27
ZEB1-218ENST00000560196 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 GJB4Q9NTQ9 266 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
ZEB1-218ENST00000560196 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 UBE2Q2LH0YL09 131 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
ZEB1-218ENST00000560196 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
ZEB1-218ENST00000560196 MAP3K10Q02779 954 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 STAG2Q8N3U4 1231 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 SH3GLB2Q9NR46 395 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 PGAP2Q9UHJ9 254 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 SYNPO2Q9UMS6 1093 aa16.72■□□□□ 0.27
ZEB1-218ENST00000560196 YEATS4O95619 227 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 SCG2P13521 617 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 TNNI2P48788 182 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 NASPP49321 788 aaPredicted RBP16.71■□□□□ 0.27
ZEB1-218ENST00000560196 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.27
ZEB1-218ENST00000560196 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 PHF20Q9BVI0 1012 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 POLR3EQ9NVU0 708 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 CLIP2Q9UDT6 1046 aa16.71■□□□□ 0.27
ZEB1-218ENST00000560196 MYH6P13533 1939 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 DICER1Q9UPY3 1922 aaKnown RBP16.7■□□□□ 0.26
ZEB1-218ENST00000560196 KLRF2D3W0D1 207 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
ZEB1-218ENST00000560196 PDHBP11177 359 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 ARHGAP27Q6ZUM4 889 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 MICALL2Q8IY33 904 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 DIS3L2Q8IYB7 885 aaKnown RBP16.7■□□□□ 0.26
ZEB1-218ENST00000560196 SYT17Q9BSW7 474 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
ZEB1-218ENST00000560196 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 CNOT7Q9UIV1 285 aaKnown RBP16.7■□□□□ 0.26
ZEB1-218ENST00000560196 ISY1Q9ULR0 285 aaKnown RBP16.7■□□□□ 0.26
ZEB1-218ENST00000560196 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
ZEB1-218ENST00000560196 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
ZEB1-218ENST00000560196 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 NBPF9Q3BBW0 867 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
ZEB1-218ENST00000560196 CAVIN1Q6NZI2 390 aaKnown RBP16.69■□□□□ 0.26
ZEB1-218ENST00000560196 NOSTRINQ8IVI9 506 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 SHISA4Q96DD7 197 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
ZEB1-218ENST00000560196 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 CYTH3O43739 400 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 CALML3P27482 149 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 GPATCH4Q5T3I0 446 aaKnown RBP16.68■□□□□ 0.26
ZEB1-218ENST00000560196 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 GPC2Q8N158 579 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 LINC00301Q8NCQ3 95 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
ZEB1-218ENST00000560196 RIOX1Q9H6W3 641 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 VPS54Q9P1Q0 977 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
ZEB1-218ENST00000560196 BTBD18B2RXH4 712 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 H7C1D1 291 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 hCG_1984214I3L0E3 225 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 SLURP2P0DP57 97 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 EEF2P13639 858 aaKnown RBP16.67■□□□□ 0.26
ZEB1-218ENST00000560196 KRT2P35908 639 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 ZNF445P59923 1031 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 ICA1Q05084 483 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 ZNF543Q08ER8 600 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 SEPT2Q15019 361 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 NPY5RQ15761 445 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 GALNT17Q6IS24 598 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 LRRC47Q8N1G4 583 aaKnown RBP16.67■□□□□ 0.26
ZEB1-218ENST00000560196 ZNF713Q8N859 430 aaPredicted RBP16.67■□□□□ 0.26
ZEB1-218ENST00000560196 DCAF4Q8WV16 495 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
ZEB1-218ENST00000560196 MORC2Q9Y6X9 1032 aaPredicted RBP16.67■□□□□ 0.26
ZEB1-218ENST00000560196 hCG_1642624A0A1W2PR95 340 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 GOLGA6L4A6NEF3 574 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 RILPL1Q5EBL4 403 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 CLEC10AQ8IUN9 316 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 DAGLBQ8NCG7 672 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 CCDC148Q8NFR7 591 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms