RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
LDHB-210ENST00000544151 CCAR1Q8IX12 1150 aaKnown RBP18.72■□□□□ 0.59
LDHB-210ENST00000544151 TANGO6Q9C0B7 1094 aa18.72■□□□□ 0.59
LDHB-210ENST00000544151 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
LDHB-210ENST00000544151 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
LDHB-210ENST00000544151 RBPJLQ9UBG7 517 aa18.72■□□□□ 0.59
LDHB-210ENST00000544151 SPDYE16A6NNV3 312 aaPredicted RBP18.71■□□□□ 0.59
LDHB-210ENST00000544151 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
LDHB-210ENST00000544151 ZMYM1Q5SVZ6 1142 aa18.71■□□□□ 0.59
LDHB-210ENST00000544151 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
LDHB-210ENST00000544151 RNF208Q9H0X6 261 aa18.71■□□□□ 0.59
LDHB-210ENST00000544151 PORCNQ9H237 461 aa18.71■□□□□ 0.59
LDHB-210ENST00000544151 CWC22Q9HCG8 908 aaKnown RBP18.71■□□□□ 0.59
LDHB-210ENST00000544151 STAP2Q9UGK3 403 aa18.71■□□□□ 0.59
LDHB-210ENST00000544151 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
LDHB-210ENST00000544151 CNMDO75829 334 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 MAPK4P31152 587 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 DSG3P32926 999 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 Q3C1V9 767 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 POTEEQ6S8J3 1075 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 SOCS4Q8WXH5 440 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 EVI5LQ96CN4 794 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 SHISA4Q96DD7 197 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 UNC93B1Q9H1C4 597 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 RABGAP1Q9Y3P9 1069 aa18.7■□□□□ 0.58
LDHB-210ENST00000544151 PATL2C9JE40 543 aaKnown RBP18.69■□□□□ 0.58
LDHB-210ENST00000544151 KIAA1755Q5JYT7 1200 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 CCDC129Q6ZRS4 1044 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 GPR142Q7Z601 462 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 IFNL3Q8IZI9 196 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 LPAR1Q92633 364 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 NACAP1Q9BZK3 213 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 NAPBQ9H115 298 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 MKNK2Q9HBH9 465 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 GJD2Q9UKL4 321 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 TMX2Q9Y320 296 aa18.69■□□□□ 0.58
LDHB-210ENST00000544151 ZNF236Q9UL36 1845 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 IGHDP01880 384 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 HMGCRP04035 888 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
LDHB-210ENST00000544151 CYP2B6P20813 491 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 RASA1P20936 1047 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 CCNA1P78396 465 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 WDR78Q5VTH9 848 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 LBX2Q6XYB7 198 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 SIAH1Q8IUQ4 282 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 NUDT12Q9BQG2 462 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 KANSL2Q9H9L4 492 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 BTBD7Q9P203 1132 aa18.68■□□□□ 0.58
LDHB-210ENST00000544151 FRMPD3Q5JV73 1810 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 RAD21O60216 631 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 PRDM1O75626 825 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 FLOT1O75955 427 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 GJB1P08034 283 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 PRPF38BQ5VTL8 546 aaKnown RBP18.67■□□□□ 0.58
LDHB-210ENST00000544151 PLEKHH3Q7Z736 793 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 CHD1LQ86WJ1 897 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 GOPCQ9HD26 462 aa18.67■□□□□ 0.58
LDHB-210ENST00000544151 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
LDHB-210ENST00000544151 WDR46O15213 610 aaKnown RBP18.66■□□□□ 0.58
LDHB-210ENST00000544151 GJA8P48165 433 aa18.66■□□□□ 0.58
LDHB-210ENST00000544151 COG2Q14746 738 aa18.66■□□□□ 0.58
LDHB-210ENST00000544151 U2AF1L4Q8WU68 220 aaKnown RBP18.66■□□□□ 0.58
LDHB-210ENST00000544151 TRIB2Q92519 343 aa18.66■□□□□ 0.58
LDHB-210ENST00000544151 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.66■□□□□ 0.58
LDHB-210ENST00000544151 ZNF287Q9HBT7 754 aa18.66■□□□□ 0.58
LDHB-210ENST00000544151 RGS2P41220 211 aa18.65■□□□□ 0.58
LDHB-210ENST00000544151 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
LDHB-210ENST00000544151 NUCB1Q02818 461 aa18.65■□□□□ 0.58
LDHB-210ENST00000544151 PPARAQ07869 468 aa18.65■□□□□ 0.58
LDHB-210ENST00000544151 ZKSCAN1P17029 563 aaPredicted RBP18.64■□□□□ 0.57
LDHB-210ENST00000544151 TRIM32Q13049 653 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.57
LDHB-210ENST00000544151 RILPL2Q969X0 211 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 ATG4CQ96DT6 458 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 DEFB118Q96PH6 123 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 APBA2Q99767 749 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.64■□□□□ 0.57
LDHB-210ENST00000544151 PAK6Q9NQU5 681 aaPredicted RBP18.64■□□□□ 0.57
LDHB-210ENST00000544151 HOXC10Q9NYD6 342 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 IVNS1ABPQ9Y6Y0 642 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 LAMA4Q16363 1823 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 PLIN4Q96Q06 1357 aa18.64■□□□□ 0.57
LDHB-210ENST00000544151 A0A0D9SFI3 127 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 FOXP2O15409 715 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 SLC3A2P08195 630 aaKnown RBP18.63■□□□□ 0.57
LDHB-210ENST00000544151 PDE4BQ07343 736 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 MORN1Q5T089 497 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 VPS53Q5VIR6 699 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 MB21D1Q8N884 522 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 FAM227BQ96M60 508 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 HELLSQ9NRZ9 838 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
LDHB-210ENST00000544151 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
LDHB-210ENST00000544151 SGPL1O95470 568 aa18.62■□□□□ 0.57
LDHB-210ENST00000544151 XRCC5P13010 732 aaKnown RBP18.62■□□□□ 0.57
LDHB-210ENST00000544151 MAP2K5Q13163 448 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms