RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 CNMDO75829 334 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 RASA1P20936 1047 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 NUCB1Q02818 461 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 CCDC129Q6ZRS4 1044 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 SH2D4AQ9H788 454 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 TMX2Q9Y320 296 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 RABGAP1Q9Y3P9 1069 aa19.24■□□□□ 0.67
CTSB-213ENST00000527215 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
CTSB-213ENST00000527215 CCL5P13501 91 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 EEF2P13639 858 aaKnown RBP19.23■□□□□ 0.67
CTSB-213ENST00000527215 ATP2B2Q01814 1243 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 NKX2-3Q8TAU0 364 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 NACAP1Q9BZK3 213 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 TANGO6Q9C0B7 1094 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 PORCNQ9H237 461 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 KANSL2Q9H9L4 492 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 MKNK2Q9HBH9 465 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 GJD2Q9UKL4 321 aa19.23■□□□□ 0.67
CTSB-213ENST00000527215 ZNFX1Q9P2E3 1918 aaKnown RBP19.23■□□□□ 0.67
CTSB-213ENST00000527215 INHAP05111 366 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 MAPK4P31152 587 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
CTSB-213ENST00000527215 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 CCAR1Q8IX12 1150 aaKnown RBP19.22■□□□□ 0.67
CTSB-213ENST00000527215 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 LPAR1Q92633 364 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTSB-213ENST00000527215 RNF208Q9H0X6 261 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 NAPBQ9H115 298 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 UNC93B1Q9H1C4 597 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 VCPKMTQ9H867 229 aa19.22■□□□□ 0.67
CTSB-213ENST00000527215 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
CTSB-213ENST00000527215 BTBD7Q9P203 1132 aa19.21■□□□□ 0.67
CTSB-213ENST00000527215 FOXP2O15409 715 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 PRDM1O75626 825 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 CCNA1P78396 465 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 COG2Q14746 738 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 GPR142Q7Z601 462 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 PLEKHM2Q8IWE5 1019 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 SHISA4Q96DD7 197 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 NUDT12Q9BQG2 462 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 HELLSQ9NRZ9 838 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 ZNF236Q9UL36 1845 aa19.2■□□□□ 0.66
CTSB-213ENST00000527215 FRMPD3Q5JV73 1810 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 A0A0D9SFI3 127 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 WDR46O15213 610 aaKnown RBP19.19■□□□□ 0.66
CTSB-213ENST00000527215 GJB1P08034 283 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 CYP2B6P20813 491 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 PPARAQ07869 468 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 VPS53Q5VIR6 699 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 PLEKHH3Q7Z736 793 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 ZNF444Q8N0Y2 327 aaPredicted RBP19.19■□□□□ 0.66
CTSB-213ENST00000527215 SOCS4Q8WXH5 440 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 FAM227BQ96M60 508 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 ZNF287Q9HBT7 754 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
CTSB-213ENST00000527215 GOPCQ9HD26 462 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 HOXC10Q9NYD6 342 aa19.19■□□□□ 0.66
CTSB-213ENST00000527215 LAMA4Q16363 1823 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 RAD21O60216 631 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 FLOT1O75955 427 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 HMGCRP04035 888 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 GJA8P48165 433 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 HABP4Q5JVS0 413 aaKnown RBP19.18■□□□□ 0.66
CTSB-213ENST00000527215 WDR78Q5VTH9 848 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 TRIB2Q92519 343 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 OSBPL3Q9H4L5 887 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 PLXNA1Q9UIW2 1896 aa19.18■□□□□ 0.66
CTSB-213ENST00000527215 SLC3A2P08195 630 aaKnown RBP19.17■□□□□ 0.66
CTSB-213ENST00000527215 DSG3P32926 999 aa19.17■□□□□ 0.66
CTSB-213ENST00000527215 PDE4BQ07343 736 aa19.17■□□□□ 0.66
CTSB-213ENST00000527215 NMIQ13287 307 aaPredicted RBP19.17■□□□□ 0.66
CTSB-213ENST00000527215 MORN1Q5T089 497 aa19.17■□□□□ 0.66
CTSB-213ENST00000527215 SAMD1Q6SPF0 538 aaPredicted RBP19.17■□□□□ 0.66
CTSB-213ENST00000527215 TICAM2Q86XR7 235 aa19.17■□□□□ 0.66
CTSB-213ENST00000527215 USP6NLQ92738 828 aa19.17■□□□□ 0.66
CTSB-213ENST00000527215 NYAP2Q9P242 653 aa19.17■□□□□ 0.66
CTSB-213ENST00000527215 IGKV6D-41A0A0C4DH26 115 aa19.16■□□□□ 0.66
CTSB-213ENST00000527215 XRCC5P13010 732 aaKnown RBP19.16■□□□□ 0.66
CTSB-213ENST00000527215 TRIM32Q13049 653 aa19.16■□□□□ 0.66
CTSB-213ENST00000527215 MCMDC2Q4G0Z9 681 aa19.16■□□□□ 0.66
CTSB-213ENST00000527215 U2AF1L4Q8WU68 220 aaKnown RBP19.16■□□□□ 0.66
CTSB-213ENST00000527215 ATG4CQ96DT6 458 aa19.16■□□□□ 0.66
CTSB-213ENST00000527215 PLIN4Q96Q06 1357 aa19.16■□□□□ 0.66
CTSB-213ENST00000527215 RGS2P41220 211 aa19.15■□□□□ 0.66
CTSB-213ENST00000527215 CTDSPL2Q05D32 466 aa19.15■□□□□ 0.66
CTSB-213ENST00000527215 FAM83BQ5T0W9 1011 aa19.15■□□□□ 0.66
CTSB-213ENST00000527215 CEP95Q96GE4 821 aa19.15■□□□□ 0.66
CTSB-213ENST00000527215 MOV10L1Q9BXT6 1211 aaKnown RBP19.15■□□□□ 0.66
CTSB-213ENST00000527215 PAK6Q9NQU5 681 aaPredicted RBP19.15■□□□□ 0.66
CTSB-213ENST00000527215 CLIP2Q9UDT6 1046 aa19.15■□□□□ 0.66
CTSB-213ENST00000527215 SGPL1O95470 568 aa19.14■□□□□ 0.65
CTSB-213ENST00000527215 TSPY3P0CV98 308 aa19.14■□□□□ 0.65
CTSB-213ENST00000527215 TSPY8P0CW00 308 aa19.14■□□□□ 0.65
CTSB-213ENST00000527215 CAPN2P17655 700 aa19.14■□□□□ 0.65
CTSB-213ENST00000527215 PTPREP23469 700 aa19.14■□□□□ 0.65
CTSB-213ENST00000527215 MAP2K5Q13163 448 aa19.14■□□□□ 0.65
CTSB-213ENST00000527215 FAM47AQ5JRC9 791 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms