RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 EVI5LQ96CN4 794 aa13.36□□□□□ -0.27
TRAPPC4-204ENST00000524797 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
TRAPPC4-204ENST00000524797 TMX2Q9Y320 296 aa13.36□□□□□ -0.27
TRAPPC4-204ENST00000524797 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 APPP05067 770 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 RASA1P20936 1047 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 MAPK4P31152 587 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 IFNL3Q8IZI9 196 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 SHISA4Q96DD7 197 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 PORCNQ9H237 461 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 VCPKMTQ9H867 229 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 KANSL2Q9H9L4 492 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 BTBD7Q9P203 1132 aa13.35□□□□□ -0.27
TRAPPC4-204ENST00000524797 ZNF236Q9UL36 1845 aa13.34□□□□□ -0.27
TRAPPC4-204ENST00000524797 GJB1P08034 283 aa13.34□□□□□ -0.27
TRAPPC4-204ENST00000524797 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
TRAPPC4-204ENST00000524797 LPAR1Q92633 364 aa13.34□□□□□ -0.27
TRAPPC4-204ENST00000524797 NACAP1Q9BZK3 213 aa13.34□□□□□ -0.27
TRAPPC4-204ENST00000524797 TANGO6Q9C0B7 1094 aa13.34□□□□□ -0.27
TRAPPC4-204ENST00000524797 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
TRAPPC4-204ENST00000524797 GJA8P48165 433 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 CCNA1P78396 465 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 ATP2B2Q01814 1243 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 NUCB1Q02818 461 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 COG2Q14746 738 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 CHD1LQ86WJ1 897 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 SOCS4Q8WXH5 440 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 USP6NLQ92738 828 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 HMGCRP04035 888 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 CYP2B6P20813 491 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 MORN1Q5T089 497 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 SPICE1Q8N0Z3 855 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 NAPBQ9H115 298 aa13.33□□□□□ -0.28
TRAPPC4-204ENST00000524797 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 FOXP2O15409 715 aa13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 DSG3P32926 999 aa13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 PRPF38BQ5VTL8 546 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 TRIB2Q92519 343 aa13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
TRAPPC4-204ENST00000524797 PRDM1O75626 825 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 XRCC5P13010 732 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 PPARAQ07869 468 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 TRIM32Q13049 653 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 PLEKHM2Q8IWE5 1019 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 ZNF287Q9HBT7 754 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 GOPCQ9HD26 462 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 SGPL1O95470 568 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 PTPREP23469 700 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 RGS2P41220 211 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 U2AF1L4Q8WU68 220 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 ATG4CQ96DT6 458 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 PAK6Q9NQU5 681 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-204ENST00000524797 PLIN4Q96Q06 1357 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 A0A0D9SFI3 127 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 SLC15A5A6NIM6 579 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 FLOT1O75955 427 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 VPS53Q5VIR6 699 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 TRMT44Q8IYL2 757 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 MB21D1Q8N884 522 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 APBA2Q99767 749 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 MOV10L1Q9BXT6 1211 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 LAMA4Q16363 1823 aa13.3□□□□□ -0.28
TRAPPC4-204ENST00000524797 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 PDE4BQ07343 736 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 ALX1Q15699 326 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 MCMDC2Q4G0Z9 681 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 UBE2Q1Q7Z7E8 422 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 DEFB118Q96PH6 123 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 SPATC1LQ9H0A9 340 aa13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAPPC4-204ENST00000524797 ALPK3Q96L96 1907 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms