RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 LBX2Q6XYB7 198 aa20.59■□□□□ 0.89
UBE2D3-213ENST00000502690 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
UBE2D3-213ENST00000502690 STAP2Q9UGK3 403 aa20.59■□□□□ 0.89
UBE2D3-213ENST00000502690 ZMYND8Q9ULU4 1186 aaPredicted RBP20.59■□□□□ 0.89
UBE2D3-213ENST00000502690 SOX1O00570 391 aaPredicted RBP20.58■□□□□ 0.89
UBE2D3-213ENST00000502690 WDR78Q5VTH9 848 aa20.58■□□□□ 0.89
UBE2D3-213ENST00000502690 NPLOC4Q8TAT6 608 aa20.58■□□□□ 0.89
UBE2D3-213ENST00000502690 NBPF3Q9H094 633 aa20.58■□□□□ 0.89
UBE2D3-213ENST00000502690 C11orf49Q9H6J7 331 aa20.58■□□□□ 0.89
UBE2D3-213ENST00000502690 CAPN2P17655 700 aa20.57■□□□□ 0.88
UBE2D3-213ENST00000502690 PTPREP23469 700 aa20.57■□□□□ 0.88
UBE2D3-213ENST00000502690 SYN1P17600 705 aa20.56■□□□□ 0.88
UBE2D3-213ENST00000502690 GRB14Q14449 540 aa20.56■□□□□ 0.88
UBE2D3-213ENST00000502690 PUS7LQ9H0K6 701 aaKnown RBP20.56■□□□□ 0.88
UBE2D3-213ENST00000502690 PLXNA1Q9UIW2 1896 aa20.56■□□□□ 0.88
UBE2D3-213ENST00000502690 DNAH12Q6ZR08 3092 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 SLC15A5A6NIM6 579 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 COL6A1P12109 1028 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 CCNA1P78396 465 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 C12orf60Q5U649 245 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 TSHZ3Q63HK5 1081 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 TMEM179Q6ZVK1 233 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 TRMT44Q8IYL2 757 aaKnown RBP20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 SPICE1Q8N0Z3 855 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 MOV10L1Q9BXT6 1211 aaKnown RBP20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 LRRCC1Q9C099 1032 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 CWC22Q9HCG8 908 aaKnown RBP20.55■□□□□ 0.88
UBE2D3-213ENST00000502690 USP17L12C9JPN9 530 aa20.54■□□□□ 0.88
UBE2D3-213ENST00000502690 USP17L21D6R901 530 aa20.54■□□□□ 0.88
UBE2D3-213ENST00000502690 IGHA2P01877 340 aa20.54■□□□□ 0.88
UBE2D3-213ENST00000502690 CDK8P49336 464 aa20.54■□□□□ 0.88
UBE2D3-213ENST00000502690 TRPV1Q8NER1 839 aa20.54■□□□□ 0.88
UBE2D3-213ENST00000502690 SWAP70Q9UH65 585 aa20.54■□□□□ 0.88
UBE2D3-213ENST00000502690 MYH4Q9Y623 1939 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 HOXC6P09630 235 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 CYP2C19P33261 490 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 ICA1Q05084 483 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 COG2Q14746 738 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 UBE3CQ15386 1083 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 LRCH3Q96II8 777 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 GDF15Q99988 308 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.53■□□□□ 0.889e-7■■□□□ 13.5
UBE2D3-213ENST00000502690 ATP8A2Q9NTI2 1148 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 SLC4A4Q9Y6R1 1079 aa20.53■□□□□ 0.88
UBE2D3-213ENST00000502690 LRRC26Q2I0M4 334 aa20.52■□□□□ 0.88
UBE2D3-213ENST00000502690 CTR9Q6PD62 1173 aa20.52■□□□□ 0.88
UBE2D3-213ENST00000502690 C16orf86Q6ZW13 317 aa20.52■□□□□ 0.88
UBE2D3-213ENST00000502690 ATG4CQ96DT6 458 aa20.52■□□□□ 0.88
UBE2D3-213ENST00000502690 SPATC1LQ9H0A9 340 aa20.52■□□□□ 0.88
UBE2D3-213ENST00000502690 TMX2Q9Y320 296 aa20.52■□□□□ 0.88
UBE2D3-213ENST00000502690 SMCHD1A6NHR9 2005 aa20.51■□□□□ 0.87
UBE2D3-213ENST00000502690 ERCC3P19447 782 aa20.51■□□□□ 0.87
UBE2D3-213ENST00000502690 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.51■□□□□ 0.87
UBE2D3-213ENST00000502690 VCPKMTQ9H867 229 aa20.51■□□□□ 0.87
UBE2D3-213ENST00000502690 IVNS1ABPQ9Y6Y0 642 aa20.51■□□□□ 0.87
UBE2D3-213ENST00000502690 LTBP2Q14767 1821 aa20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 COBLO75128 1261 aa20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 GLRX3O76003 335 aaKnown RBP20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 ADORA2AP29274 412 aa20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 DSG3P32926 999 aa20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 MAGEA10P43363 369 aaPredicted RBP20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 SAMD1Q6SPF0 538 aaPredicted RBP20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 FBXO28Q9NVF7 368 aa20.5■□□□□ 0.87
UBE2D3-213ENST00000502690 FLOT1O75955 427 aa20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 CYBAP13498 195 aa20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 EEF2P13639 858 aaKnown RBP20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 ATP2B2Q01814 1243 aa20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 MFSD14CQ5VZR4 134 aa20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 LPAR1Q92633 364 aa20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 CHMP4BQ9H444 224 aaKnown RBP20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 ARHGEF10LQ9HCE6 1279 aa20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 ECHDC1Q9NTX5 307 aa20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 DDX20Q9UHI6 824 aaKnown RBP20.49■□□□□ 0.87
UBE2D3-213ENST00000502690 A0A1W2PPC1 479 aa20.48■□□□□ 0.87
UBE2D3-213ENST00000502690 STK11IPQ8N1F8 1099 aa20.48■□□□□ 0.87
UBE2D3-213ENST00000502690 OSBP2Q969R2 916 aa20.48■□□□□ 0.87
UBE2D3-213ENST00000502690 STRBPQ96SI9 672 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-213ENST00000502690 HOXC10Q9NYD6 342 aa20.48■□□□□ 0.87
UBE2D3-213ENST00000502690 GSG1L2A8MUP6 293 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 CNGA1P29973 690 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 BMP8BP34820 402 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 PLS1Q14651 629 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 TMEM132BQ14DG7 1078 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 SHCBP1Q8NEM2 672 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 CCDC17Q96LX7 622 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 DCTPP1Q9H773 170 aa20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 EPB41L4AQ9HCS5 686 aaPredicted RBP20.47■□□□□ 0.87
UBE2D3-213ENST00000502690 WDR46O15213 610 aaKnown RBP20.46■□□□□ 0.87
UBE2D3-213ENST00000502690 DPP9Q86TI2 863 aa20.46■□□□□ 0.87
UBE2D3-213ENST00000502690 KBTBD3Q8NAB2 608 aa20.46■□□□□ 0.87
UBE2D3-213ENST00000502690 COL6A3P12111 3177 aa20.45■□□□□ 0.86
UBE2D3-213ENST00000502690 M0R2C6 588 aa20.45■□□□□ 0.86
UBE2D3-213ENST00000502690 RASA1P20936 1047 aa20.45■□□□□ 0.86
UBE2D3-213ENST00000502690 PRAMEF19Q5SWL8 479 aa20.45■□□□□ 0.86
UBE2D3-213ENST00000502690 NCAPG2Q86XI2 1143 aa20.45■□□□□ 0.86
UBE2D3-213ENST00000502690 MB21D1Q8N884 522 aa20.45■□□□□ 0.86
UBE2D3-213ENST00000502690 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
UBE2D3-213ENST00000502690 NUP88Q99567 741 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms