RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SOCS4Q8WXH5 440 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 NACAP1Q9BZK3 213 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 VCPKMTQ9H867 229 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
ERCC3-209ENST00000494464 SPDYE16A6NNV3 312 aaPredicted RBP15.74■□□□□ 0.11
ERCC3-209ENST00000494464 MINDY4BA8MYZ0 360 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 APPP05067 770 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 RASA1P20936 1047 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 MTFR1Q15390 333 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 PAGR1Q9BTK6 254 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 OSBPL3Q9H4L5 887 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 ZNF287Q9HBT7 754 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 GJD2Q9UKL4 321 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
ERCC3-209ENST00000494464 ZNF236Q9UL36 1845 aa15.74■□□□□ 0.11
ERCC3-209ENST00000494464 MYH4Q9Y623 1939 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 WDR46O15213 610 aaKnown RBP15.73■□□□□ 0.11
ERCC3-209ENST00000494464 CNMDO75829 334 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 ELNP15502 786 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 EN2P19622 333 aaPredicted RBP15.73■□□□□ 0.11
ERCC3-209ENST00000494464 CCNA1P78396 465 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.73■□□□□ 0.11
ERCC3-209ENST00000494464 NAPBQ9H115 298 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 PORCNQ9H237 461 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 PLIN4Q96Q06 1357 aa15.73■□□□□ 0.11
ERCC3-209ENST00000494464 FOXP2O15409 715 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 PEX10O60683 326 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 MYCP01106 439 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-209ENST00000494464 INHAP05111 366 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 CCL5P13501 91 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 EEF2P13639 858 aaKnown RBP15.72■□□□□ 0.11
ERCC3-209ENST00000494464 Q3C1V9 767 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 KIAA1755Q5JYT7 1200 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 TANGO6Q9C0B7 1094 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 MKNK2Q9HBH9 465 aa15.72■□□□□ 0.11
ERCC3-209ENST00000494464 BIN2Q9UBW5 565 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-209ENST00000494464 PDE4DIPQ5VU43 2346 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 HMGCRP04035 888 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 GJB1P08034 283 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 COG2Q14746 738 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 GPR142Q7Z601 462 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 PLEKHM2Q8IWE5 1019 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 NKX2-3Q8TAU0 364 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 SHISA4Q96DD7 197 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 NUDT12Q9BQG2 462 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 GOPCQ9HD26 462 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 BTBD7Q9P203 1132 aa15.71■□□□□ 0.11
ERCC3-209ENST00000494464 IGKV6D-41A0A0C4DH26 115 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 SLC3A2P08195 630 aaKnown RBP15.7■□□□□ 0.1
ERCC3-209ENST00000494464 XRCC5P13010 732 aaKnown RBP15.7■□□□□ 0.1
ERCC3-209ENST00000494464 GJA8P48165 433 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 PDE4BQ07343 736 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 PPARAQ07869 468 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 PLEKHH3Q7Z736 793 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 CCAR1Q8IX12 1150 aaKnown RBP15.7■□□□□ 0.1
ERCC3-209ENST00000494464 MB21D1Q8N884 522 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 USP6NLQ92738 828 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 RNF208Q9H0X6 261 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 NYAP2Q9P242 653 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 COL11A1P12107 1806 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-209ENST00000494464 ZMYM6O95789 1325 aa15.7■□□□□ 0.1
ERCC3-209ENST00000494464 A0A0D9SFI3 127 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 TRIM6-TRIM34B2RNG4 842 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 CAPN2P17655 700 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 ATP2B2Q01814 1243 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 MORN1Q5T089 497 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 ZNF444Q8N0Y2 327 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-209ENST00000494464 SPICE1Q8N0Z3 855 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 STK11IPQ8N1F8 1099 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 UNC93B1Q9H1C4 597 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 PAK6Q9NQU5 681 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-209ENST00000494464 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
ERCC3-209ENST00000494464 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 FLOT1O75955 427 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 DSG3P32926 999 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 RGS2P41220 211 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 ALX1Q15699 326 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 MCMDC2Q4G0Z9 681 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 TRMT44Q8IYL2 757 aaKnown RBP15.68■□□□□ 0.1
ERCC3-209ENST00000494464 TRIB2Q92519 343 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 FAM227BQ96M60 508 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 APBA2Q99767 749 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 ANAPC4Q9UJX5 808 aa15.68■□□□□ 0.1
ERCC3-209ENST00000494464 PRDM1O75626 825 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 CYP2B6P20813 491 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 NMIQ13287 307 aaPredicted RBP15.67■□□□□ 0.1
ERCC3-209ENST00000494464 VPS53Q5VIR6 699 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 PRPF38BQ5VTL8 546 aaKnown RBP15.67■□□□□ 0.1
ERCC3-209ENST00000494464 SHCBP1Q8NEM2 672 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 NEDD1Q8NHV4 660 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 U2AF1L4Q8WU68 220 aaKnown RBP15.67■□□□□ 0.1
ERCC3-209ENST00000494464 RILPL2Q969X0 211 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 CEP95Q96GE4 821 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 SPATC1LQ9H0A9 340 aa15.67■□□□□ 0.1
ERCC3-209ENST00000494464 CWC22Q9HCG8 908 aaKnown RBP15.67■□□□□ 0.1
ERCC3-209ENST00000494464 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
ERCC3-209ENST00000494464 CCDC171Q6TFL3 1326 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms