RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 PICK1Q9NRD5 415 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 ZBTB21Q9ULJ3 1066 aa10.52□□□□□ -0.73
ITGB1-217ENST00000494395 A0A0D9SFI3 127 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 USP17L5A8MUK1 530 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 OATP04181 439 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 ASNSP08243 561 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 GNAT2P19087 354 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 GUCY1A2P33402 732 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 CLCN1P35523 988 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 PRSS12P56730 875 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 CRHR2Q13324 411 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 SH3D19Q5HYK7 790 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 GPAT2Q6NUI2 795 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 CCDC129Q6ZRS4 1044 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 C16orf86Q6ZW13 317 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 ANKRD23Q86SG2 305 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
ITGB1-217ENST00000494395 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 SLC44A5Q8NCS7 719 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 DYNLL2Q96FJ2 89 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 FAM227BQ96M60 508 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 WDR18Q9BV38 432 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 ARPP21Q9UBL0 812 aaPredicted RBP10.51□□□□□ -0.73
ITGB1-217ENST00000494395 ADGRG1Q9Y653 693 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 ADGRA2Q96PE1 1338 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 ZSWIM8A7E2V4 1837 aa10.51□□□□□ -0.73
ITGB1-217ENST00000494395 PATL2C9JE40 543 aaKnown RBP10.5□□□□□ -0.73
ITGB1-217ENST00000494395 GPR25O00155 361 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 GH2P01242 217 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 CERKLQ49MI3 558 aaPredicted RBP10.5□□□□□ -0.73
ITGB1-217ENST00000494395 TTC22Q5TAA0 569 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 OTUD7BQ6GQQ9 843 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 GPCPD1Q9NPB8 672 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 HELLSQ9NRZ9 838 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 SWAP70Q9UH65 585 aa10.5□□□□□ -0.73
ITGB1-217ENST00000494395 LAMA4Q16363 1823 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 TRIM75PA6NK02 468 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 TRIM6-TRIM34B2RNG4 842 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 SDSP20132 328 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 COL9A1P20849 921 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 CDK8P49336 464 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 SPP2Q13103 211 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 NMIQ13287 307 aaPredicted RBP10.49□□□□□ -0.73
ITGB1-217ENST00000494395 TAF1CQ15572 869 aaPredicted RBP10.49□□□□□ -0.73
ITGB1-217ENST00000494395 CENPQQ7L2Z9 268 aaPredicted RBP10.49□□□□□ -0.73
ITGB1-217ENST00000494395 ZNF589Q86UQ0 364 aaPredicted RBP10.49□□□□□ -0.73
ITGB1-217ENST00000494395 IFNL3Q8IZI9 196 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 ZNF296Q8WUU4 475 aaPredicted RBP10.49□□□□□ -0.73
ITGB1-217ENST00000494395 RILPL2Q969X0 211 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 SLC45A1Q9Y2W3 748 aa10.49□□□□□ -0.73
ITGB1-217ENST00000494395 PDHXO00330 501 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 TLR2O60603 784 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 CAP1Q01518 475 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 DGKZQ13574 1117 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 ALX1Q15699 326 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 ABCB5Q2M3G0 1257 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 MCMDC2Q4G0Z9 681 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 VPS53Q5VIR6 699 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 FASTKD5Q7L8L6 764 aaKnown RBP10.48□□□□□ -0.73
ITGB1-217ENST00000494395 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
ITGB1-217ENST00000494395 NLRP7Q8WX94 980 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 AS3MTQ9HBK9 375 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 AGTPBP1Q9UPW5 1226 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 PARP14Q460N5 1801 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 MGAMO43451 1857 aa10.48□□□□□ -0.73
ITGB1-217ENST00000494395 RLFQ13129 1914 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 FKTNO75072 461 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 AKR1B1P15121 316 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 RASA1P20936 1047 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 TDO2P48775 406 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 HMGCS2P54868 508 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 BACE1P56817 501 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 MTMR2Q13614 643 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 SEPT2Q15019 361 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 TREML2Q5T2D2 321 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 C17orf99Q6UX52 265 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 GADL1Q6ZQY3 521 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 SIAH1Q8IUQ4 282 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 C12orf42Q96LP6 360 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 CCDC17Q96LX7 622 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 IL25Q9H293 177 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 ZFYVE28Q9HCC9 887 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 ZMYM6O95789 1325 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 CCDC171Q6TFL3 1326 aa10.47□□□□□ -0.73
ITGB1-217ENST00000494395 MYH4Q9Y623 1939 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 A0A1W2PRG0 241 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 C19orf81C9J6K1 198 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 USP17L10C9JJH3 530 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 HSPD1P10809 573 aaKnown RBP10.46□□□□□ -0.73
ITGB1-217ENST00000494395 PTPREP23469 700 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 TMEM179Q6ZVK1 233 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 SKAP1Q86WV1 359 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 AMOTL1Q8IY63 956 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 ACER1Q8TDN7 264 aa10.46□□□□□ -0.73
ITGB1-217ENST00000494395 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms