RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 MKNK2Q9HBH9 465 aa16.28■□□□□ 0.2
SPCS1-204ENST00000474945 RBPJLQ9UBG7 517 aa16.28■□□□□ 0.2
SPCS1-204ENST00000474945 SPDYE16A6NNV3 312 aaPredicted RBP16.27■□□□□ 0.2
SPCS1-204ENST00000474945 RAD21O60216 631 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 MAPK4P31152 587 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 IRX6P78412 446 aaPredicted RBP16.27■□□□□ 0.2
SPCS1-204ENST00000474945 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 CCDC129Q6ZRS4 1044 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 CHD1LQ86WJ1 897 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 PXYLP1Q8TE99 480 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 SOCS4Q8WXH5 440 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 LPAR1Q92633 364 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 RNF208Q9H0X6 261 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 NAPBQ9H115 298 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 PORCNQ9H237 461 aa16.27■□□□□ 0.2
SPCS1-204ENST00000474945 TRIM6-TRIM34B2RNG4 842 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 IGHDP01880 384 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 EEF2P13639 858 aaKnown RBP16.26■□□□□ 0.19
SPCS1-204ENST00000474945 CCNA1P78396 465 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 UNC93B1Q9H1C4 597 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 VCPKMTQ9H867 229 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 TMX2Q9Y320 296 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 RABGAP1Q9Y3P9 1069 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 PDE4DIPQ5VU43 2346 aa16.26■□□□□ 0.19
SPCS1-204ENST00000474945 MKI67P46013 3256 aaKnown RBP16.25■□□□□ 0.19
SPCS1-204ENST00000474945 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
SPCS1-204ENST00000474945 PRDM1O75626 825 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 CNMDO75829 334 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 FLOT1O75955 427 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 HMGCRP04035 888 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 RASA1P20936 1047 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 DSG3P32926 999 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 NUCB1Q02818 461 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 KIAA1755Q5JYT7 1200 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 GPR142Q7Z601 462 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
SPCS1-204ENST00000474945 GREB1LQ9C091 1923 aaPredicted RBP16.24■□□□□ 0.19
SPCS1-204ENST00000474945 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
SPCS1-204ENST00000474945 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
SPCS1-204ENST00000474945 CYP2B6P20813 491 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 Q3C1V9 767 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 POTEEQ6S8J3 1075 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 LBX2Q6XYB7 198 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 PLEKHH3Q7Z736 793 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 SIAH1Q8IUQ4 282 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 NKX2-3Q8TAU0 364 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 SHISA4Q96DD7 197 aa16.24■□□□□ 0.19
SPCS1-204ENST00000474945 A0A0D9SFI3 127 aa16.23■□□□□ 0.19
SPCS1-204ENST00000474945 GJB1P08034 283 aa16.23■□□□□ 0.19
SPCS1-204ENST00000474945 PDE4BQ07343 736 aa16.23■□□□□ 0.19
SPCS1-204ENST00000474945 PPARAQ07869 468 aa16.23■□□□□ 0.19
SPCS1-204ENST00000474945 RILPL2Q969X0 211 aa16.23■□□□□ 0.19
SPCS1-204ENST00000474945 BTBD7Q9P203 1132 aa16.23■□□□□ 0.19
SPCS1-204ENST00000474945 GJD2Q9UKL4 321 aa16.23■□□□□ 0.19
SPCS1-204ENST00000474945 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 ZKSCAN1P17029 563 aaPredicted RBP16.22■□□□□ 0.19
SPCS1-204ENST00000474945 RGS2P41220 211 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 COG2Q14746 738 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 PRPF38BQ5VTL8 546 aaKnown RBP16.22■□□□□ 0.19
SPCS1-204ENST00000474945 ZNF444Q8N0Y2 327 aaPredicted RBP16.22■□□□□ 0.19
SPCS1-204ENST00000474945 U2AF1L4Q8WU68 220 aaKnown RBP16.22■□□□□ 0.19
SPCS1-204ENST00000474945 TRIB2Q92519 343 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 FAM227BQ96M60 508 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 APBA2Q99767 749 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.22■□□□□ 0.19
SPCS1-204ENST00000474945 HELLSQ9NRZ9 838 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 IVNS1ABPQ9Y6Y0 642 aa16.22■□□□□ 0.19
SPCS1-204ENST00000474945 DOCK3Q8IZD9 2030 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 FOXP2O15409 715 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 TSPY3P0CV98 308 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 TSPY8P0CW00 308 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 GJA8P48165 433 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 NMIQ13287 307 aaPredicted RBP16.21■□□□□ 0.19
SPCS1-204ENST00000474945 PLS1Q14651 629 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 FAM83BQ5T0W9 1011 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 MB21D1Q8N884 522 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 DEFB118Q96PH6 123 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.21■□□□□ 0.19
SPCS1-204ENST00000474945 HOXC10Q9NYD6 342 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 PLIN4Q96Q06 1357 aa16.21■□□□□ 0.19
SPCS1-204ENST00000474945 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
SPCS1-204ENST00000474945 TRIM32Q13049 653 aa16.2■□□□□ 0.18
SPCS1-204ENST00000474945 MCMDC2Q4G0Z9 681 aa16.2■□□□□ 0.18
SPCS1-204ENST00000474945 MORN1Q5T089 497 aa16.2■□□□□ 0.18
SPCS1-204ENST00000474945 LRRC47Q8N1G4 583 aaKnown RBP16.2■□□□□ 0.18
SPCS1-204ENST00000474945 CEP95Q96GE4 821 aa16.2■□□□□ 0.18
SPCS1-204ENST00000474945 SPATC1LQ9H0A9 340 aa16.2■□□□□ 0.18
SPCS1-204ENST00000474945 CCDC171Q6TFL3 1326 aa16.19■□□□□ 0.18
SPCS1-204ENST00000474945 IGKV6D-41A0A0C4DH26 115 aa16.19■□□□□ 0.18
SPCS1-204ENST00000474945 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
SPCS1-204ENST00000474945 PRKAR2AP13861 404 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms