RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 FOXP1Q9H334 677 aaPredicted RBP19.67■□□□□ 0.74
TMEM39B-203ENST00000441402 RTEL1Q9NZ71 1219 aa19.67■□□□□ 0.74
TMEM39B-203ENST00000441402 CNTNAP1P78357 1384 aa19.67■□□□□ 0.74
TMEM39B-203ENST00000441402 SNHG28P0DPA3 235 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 PFKFB3Q16875 520 aaPredicted RBP19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 USP28Q96RU2 1077 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 SPZ1Q9BXG8 430 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 TRIM34Q9BYJ4 488 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 FHDC1Q9C0D6 1143 aaPredicted RBP19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 NYAP2Q9P242 653 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 CLRN2A0PK11 232 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 TCP10L2B9ZVM9 353 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 TBC1D12O60347 775 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 PARP1P09874 1014 aaKnown RBP19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 CSRNP1Q96S65 589 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 PHF20Q9BVI0 1012 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 KANSL2Q9H9L4 492 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 SH3GLB2Q9NR46 395 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 POLR3EQ9NVU0 708 aa19.66■□□□□ 0.74
TMEM39B-203ENST00000441402 DICER1Q9UPY3 1922 aaKnown RBP19.65■□□□□ 0.74
TMEM39B-203ENST00000441402 SCG2P13521 617 aa19.65■□□□□ 0.74
TMEM39B-203ENST00000441402 MAP3K10Q02779 954 aa19.65■□□□□ 0.74
TMEM39B-203ENST00000441402 CAVIN1Q6NZI2 390 aaKnown RBP19.65■□□□□ 0.74
TMEM39B-203ENST00000441402 TMEM179Q6ZVK1 233 aa19.65■□□□□ 0.74
TMEM39B-203ENST00000441402 CLIP2Q9UDT6 1046 aa19.65■□□□□ 0.74
TMEM39B-203ENST00000441402 PGAP2Q9UHJ9 254 aa19.65■□□□□ 0.74
TMEM39B-203ENST00000441402 KLRF2D3W0D1 207 aa19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 YEATS4O95619 227 aa19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 PDHBP11177 359 aa19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 LMNB1P20700 586 aa19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 NASPP49321 788 aaPredicted RBP19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 NBPF9Q3BBW0 867 aa19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 ASPRV1Q53RT3 343 aa19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 DIS3L2Q8IYB7 885 aaKnown RBP19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 SYAP1Q96A49 352 aaPredicted RBP19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 ISY1Q9ULR0 285 aaKnown RBP19.64■□□□□ 0.73
TMEM39B-203ENST00000441402 MPHOSPH10O00566 681 aaKnown RBP19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 CYTH3O43739 400 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 TNNI2P48788 182 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 GMPSP49915 693 aaPredicted RBP19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 NOSTRINQ8IVI9 506 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 SHISA4Q96DD7 197 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 SYT17Q9BSW7 474 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 TMEM63CQ9P1W3 806 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 CNOT7Q9UIV1 285 aaKnown RBP19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 SYNPO2Q9UMS6 1093 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 KCNJ14Q9UNX9 436 aa19.63■□□□□ 0.73
TMEM39B-203ENST00000441402 BTBD18B2RXH4 712 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 SLURP2P0DP57 97 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 ZNF445P59923 1031 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 GNL2Q13823 731 aaKnown RBP19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 ABCB5Q2M3G0 1257 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 SLC35G1Q2M3R5 365 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 ARHGAP27Q6ZUM4 889 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 LINC00301Q8NCQ3 95 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 PGBD1Q96JS3 809 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 RIOX1Q9H6W3 641 aa19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.62■□□□□ 0.73
TMEM39B-203ENST00000441402 FAM196BA6NMK8 535 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 TNFAIP1Q13829 316 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 RBM26Q5T8P6 1007 aaKnown RBP19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 USP17L2Q6R6M4 530 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 MICALL2Q8IY33 904 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 VEZTQ9HBM0 779 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 VPS54Q9P1Q0 977 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 hCG_1642624A0A1W2PR95 340 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 SHTN1A0MZ66 631 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 GOLGA6L4A6NEF3 574 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 USP17L5A8MUK1 530 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 NPY5RQ15761 445 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 ZSCAN23Q3MJ62 389 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 GPATCH4Q5T3I0 446 aaKnown RBP19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 ANO1Q5XXA6 986 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 SIAH1Q8IUQ4 282 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 KCNG4Q8TDN1 519 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 CABP5Q9NP86 173 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 GJA3Q9Y6H8 435 aa19.61■□□□□ 0.73
TMEM39B-203ENST00000441402 MYH4Q9Y623 1939 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 SBF1O95248 1867 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 BAZ2BQ9UIF8 2168 aaKnown RBP19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 EEF2P13639 858 aaKnown RBP19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 CALML3P27482 149 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 KRT2P35908 639 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 ZNF543Q08ER8 600 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 RILPL1Q5EBL4 403 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 GALNT17Q6IS24 598 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 GPC2Q8N158 579 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 LRRC47Q8N1G4 583 aaKnown RBP19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 FTOQ9C0B1 505 aaKnown RBP eCLIP19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 BRMS1Q9HCU9 246 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 CLIC4Q9Y696 253 aa19.6■□□□□ 0.73
TMEM39B-203ENST00000441402 ZNF541Q9H0D2 1346 aa19.59■□□□□ 0.73
TMEM39B-203ENST00000441402 FSD2A1L4K1 749 aa19.59■□□□□ 0.73
TMEM39B-203ENST00000441402 GOLGA8HP0CJ92 632 aa19.59■□□□□ 0.73
TMEM39B-203ENST00000441402 CEBPZQ03701 1054 aaKnown RBP19.59■□□□□ 0.73
TMEM39B-203ENST00000441402 SEPT2Q15019 361 aa19.59■□□□□ 0.73
TMEM39B-203ENST00000441402 SLC39A14Q15043 492 aa19.59■□□□□ 0.73
TMEM39B-203ENST00000441402 TMEM39BQ9GZU3 492 aa19.59■□□□□ 0.73
TMEM39B-203ENST00000441402 H7C1D1 291 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms