RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
PDPN-202ENST00000376057 DTNBO60941 627 aa12.85□□□□□ -0.35
PDPN-202ENST00000376057 SCG2P13521 617 aa12.85□□□□□ -0.35
PDPN-202ENST00000376057 PRELPP51888 382 aa12.85□□□□□ -0.35
PDPN-202ENST00000376057 CERKLQ49MI3 558 aaPredicted RBP12.85□□□□□ -0.35
PDPN-202ENST00000376057 V9GY48 417 aaPredicted RBP12.85□□□□□ -0.35
PDPN-202ENST00000376057 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 PARP1P09874 1014 aaKnown RBP12.84□□□□□ -0.35
PDPN-202ENST00000376057 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 NOSTRINQ8IVI9 506 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 DAGLBQ8NCG7 672 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 AIFM3Q96NN9 605 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 RIOX1Q9H6W3 641 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
PDPN-202ENST00000376057 KIF28PB7ZC32 967 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 FIBPO43427 364 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 GADD45BO75293 160 aaPredicted RBP12.84□□□□□ -0.35
PDPN-202ENST00000376057 TNNI2P48788 182 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 GMCL1P1Q8NEA9 526 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 KCNG4Q8TDN1 519 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.84□□□□□ -0.35
PDPN-202ENST00000376057 WNT10BO00744 389 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 PDHBP11177 359 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 LMNB1P20700 586 aa12.84□□□□□ -0.35
PDPN-202ENST00000376057 GPATCH4Q5T3I0 446 aaKnown RBP12.84□□□□□ -0.35
PDPN-202ENST00000376057 A0A1W2PQ27 194 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 A0A1W2PQ64 194 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 A0A1W2PQD8 194 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 PPP6R2O75170 966 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 CALML3P27482 149 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 TNFAIP1Q13829 316 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 RILPL1Q5EBL4 403 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 LINC00301Q8NCQ3 95 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 DCAF4Q8WV16 495 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 TNFRSF25Q93038 417 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 USP28Q96RU2 1077 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 PPP1R1BQ9UD71 204 aaPredicted RBP12.83□□□□□ -0.36
PDPN-202ENST00000376057 CACNB3P54284 484 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 TCP10Q12799 353 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 CSRNP1Q96S65 589 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.36
PDPN-202ENST00000376057 KLRF2D3W0D1 207 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 SLC39A14Q15043 492 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 NPY5RQ15761 445 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 FAM173BQ6P4H8 233 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 DIS3L2Q8IYB7 885 aaKnown RBP12.82□□□□□ -0.36
PDPN-202ENST00000376057 GPC2Q8N158 579 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 KRT2P35908 639 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 TRAPPC10P48553 1259 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 RASSF7Q02833 373 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 ABCB5Q2M3G0 1257 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 ZSCAN23Q3MJ62 389 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 CCDC148Q8NFR7 591 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 MTMR8Q96EF0 704 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 GMCL1Q96IK5 515 aa12.82□□□□□ -0.36
PDPN-202ENST00000376057 TFIP11Q9UBB9 837 aaKnown RBP12.82□□□□□ -0.36
PDPN-202ENST00000376057 ESYT2A0FGR8 921 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 CYTH3O43739 400 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
PDPN-202ENST00000376057 ZSCAN29Q8IWY8 852 aaPredicted RBP12.81□□□□□ -0.36
PDPN-202ENST00000376057 CCDC12Q8WUD4 166 aaPredicted RBP12.81□□□□□ -0.36
PDPN-202ENST00000376057 PGBD1Q96JS3 809 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 TMEM63CQ9P1W3 806 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 FAM237AA0A1B0GTK4 181 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 GMPSP49915 693 aaPredicted RBP12.81□□□□□ -0.36
PDPN-202ENST00000376057 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
PDPN-202ENST00000376057 SIAH1Q8IUQ4 282 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
PDPN-202ENST00000376057 FHDC1Q9C0D6 1143 aaPredicted RBP12.81□□□□□ -0.36
PDPN-202ENST00000376057 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 CLIP2Q9UDT6 1046 aa12.81□□□□□ -0.36
PDPN-202ENST00000376057 UBE2Q2LH0YL09 131 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 M0R2N6 131 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 BMP15O95972 392 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 PTPAQ15257 358 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 FOXD4L6Q3SYB3 417 aaPredicted RBP12.8□□□□□ -0.36
PDPN-202ENST00000376057 FOXD4L3Q6VB84 417 aaPredicted RBP12.8□□□□□ -0.36
PDPN-202ENST00000376057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDPN-202ENST00000376057 PPP2R3BQ9Y5P8 575 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 HOOK2Q96ED9 719 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
PDPN-202ENST00000376057 CABP5Q9NP86 173 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 DDX19AQ9NUU7 478 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms