RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 COL4A1P02462 1669 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 UBR2Q8IWV8 1755 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.527e-8■■□□□ 11.7
SMPD4-201ENST00000351288 PDE4CQ08493 712 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 INF2Q27J81 1249 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 CD209Q9NNX6 404 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 NFE2L3Q9Y4A8 694 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-201ENST00000351288 SLC16A2P36021 539 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 ERCC6LQ2NKX8 1250 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 CERKQ8TCT0 537 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 ZNF384Q8TF68 577 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 PPP1R13BQ96KQ4 1090 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 ZSWIM4Q9H7M6 989 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 NUP98P52948 1817 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 A0A087X0B3 334 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 KRT18P05783 430 aaKnown RBP11.81□□□□□ -0.52
SMPD4-201ENST00000351288 TOP1P11387 765 aaKnown RBP11.81□□□□□ -0.52
SMPD4-201ENST00000351288 CHRNA5P30532 468 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 MYL5Q02045 173 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
SMPD4-201ENST00000351288 RILPL1Q5EBL4 403 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 RESP18Q5W5W9 173 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 SHANK3Q9BYB0 1731 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 FAM170AA1A519 330 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 IFNAR1P17181 557 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 TTC38Q5R3I4 469 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 SGMS1Q86VZ5 419 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 BIN2Q9UBW5 565 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-201ENST00000351288 MYH2Q9UKX2 1941 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 ITGB4P16144 1822 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 KLRF2D3W0D1 207 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 HLA-DOAP06340 250 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 CDC25BP30305 580 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 PLCD1P51178 756 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 RAD51AP2Q09MP3 1159 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 PTGDRQ13258 359 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 POSTNQ15063 836 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 RRAGBQ5VZM2 374 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 FBXL16Q8N461 479 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 MAN1B1Q9UKM7 699 aa11.81□□□□□ -0.52
SMPD4-201ENST00000351288 MYH7P12883 1935 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 MYH15Q9Y2K3 1946 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 A0A0U1RQJ8 604 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 CLRN2A0PK11 232 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 PPEF1O14829 653 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 PARP1P09874 1014 aaKnown RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 KARSQ15046 597 aaKnown RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 CCDC178Q5BJE1 867 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 ANKRD20A12PQ8NF67 263 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 KIF18AQ8NI77 898 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 ATRIPQ8WXE1 791 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 HPSEQ9Y251 543 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 BAZ2AQ9UIF9 1905 aaKnown RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 CCT6AP40227 531 aaKnown RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 STAT6P42226 847 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 LIFRP42702 1097 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 SNAP25P60880 206 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 MTF1Q14872 753 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 H0YIN7 160 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 URI1O94763 535 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 TXKP42681 527 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
SMPD4-201ENST00000351288 ARPP21Q9UBL0 812 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-201ENST00000351288 CUTAO60888 179 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 TPM1P09493 284 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 USH1GQ495M9 461 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 TEX33O43247 280 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 CTIFO43310 598 aaKnown RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 CALM1P0DP23 149 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 CALM2P0DP24 149 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 CALM3P0DP25 149 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 ZNF76P36508 570 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 TANGO6Q9C0B7 1094 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 CCNT1O60563 726 aaKnown RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 PPP6R2O75170 966 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 RAD17O75943 681 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
SMPD4-201ENST00000351288 COA7Q96BR5 231 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 MED15Q96RN5 788 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 ATP8A2Q9NTI2 1148 aa11.79□□□□□ -0.52
SMPD4-201ENST00000351288 MYH14Q7Z406 1995 aaKnown RBP11.78□□□□□ -0.52
SMPD4-201ENST00000351288 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
SMPD4-201ENST00000351288 GDF11O95390 407 aa11.78□□□□□ -0.52
SMPD4-201ENST00000351288 SCG2P13521 617 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms