RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 ZNF396Q96N95 335 aaPredicted RBP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 MAD2L2Q9UI95 211 aa16.01■□□□□ 0.15
CCDC178-201ENST00000300227 BAZ2BQ9UIF8 2168 aaKnown RBP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 TBC1D10BQ4KMP7 808 aaPredicted RBP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 DIS3L2Q8IYB7 885 aaKnown RBP16.01■□□□□ 0.15
CCDC178-201ENST00000300227 TCHHQ07283 1943 aa16.01■□□□□ 0.15
CCDC178-201ENST00000300227 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
CCDC178-201ENST00000300227 USP17L5A8MUK1 530 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 TTLL1O95922 423 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 DEKP35659 375 aaKnown RBP16■□□□□ 0.15
CCDC178-201ENST00000300227 VAT1LQ9HCJ6 419 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 TMEM63CQ9P1W3 806 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 FRMPD2Q68DX3 1309 aaPredicted RBP16■□□□□ 0.15
CCDC178-201ENST00000300227 KLRF2D3W0D1 207 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 FZD9O00144 591 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 PARP1P09874 1014 aaKnown RBP16■□□□□ 0.15
CCDC178-201ENST00000300227 MYSM1Q5VVJ2 828 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 CCDC17Q96LX7 622 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 SYT17Q9BSW7 474 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 CNOT7Q9UIV1 285 aaKnown RBP16■□□□□ 0.15
CCDC178-201ENST00000300227 ZNF646O15015 1829 aaPredicted RBP16■□□□□ 0.15
CCDC178-201ENST00000300227 MMP1P03956 469 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 XBP1P17861 261 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 NR5A1Q13285 461 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 MIGA2Q7L4E1 593 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 BRAPQ7Z569 592 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 FAM151AQ8WW52 585 aa16■□□□□ 0.15
CCDC178-201ENST00000300227 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
CCDC178-201ENST00000300227 GNAQP50148 359 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 SEPT2Q15019 361 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 OXER1Q8TDS5 423 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 UBA5Q9GZZ9 404 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 BRCA1P38398 1863 aaKnown RBP15.99■□□□□ 0.15
CCDC178-201ENST00000300227 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 IGKV6D-41A0A0C4DH26 115 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 HOMER1Q86YM7 354 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 CLIC4Q9Y696 253 aa15.99■□□□□ 0.15
CCDC178-201ENST00000300227 PALM3A6NDB9 673 aaPredicted RBP15.98■□□□□ 0.15
CCDC178-201ENST00000300227 ABCB5Q2M3G0 1257 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 SLC35G1Q2M3R5 365 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 MTMR14Q8NCE2 650 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
CCDC178-201ENST00000300227 GPCPD1Q9NPB8 672 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 ASTN2O75129 1339 aaPredicted RBP15.98■□□□□ 0.15
CCDC178-201ENST00000300227 CYTH3O43739 400 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 GH2P01242 217 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 SCG2P13521 617 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 ATP2B1P20020 1258 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 RPS12P25398 132 aaKnown RBP15.98■□□□□ 0.15
CCDC178-201ENST00000300227 MAP3K14Q99558 947 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 CNTNAP1P78357 1384 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 ATRNL1Q5VV63 1379 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 PLIN4Q96Q06 1357 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 PDHBP11177 359 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 RRP1BQ14684 758 aaKnown RBP15.98■□□□□ 0.15
CCDC178-201ENST00000300227 ZSCAN23Q3MJ62 389 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 TATDN1Q6P1N9 297 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 BICD2Q8TD16 824 aa15.98■□□□□ 0.15
CCDC178-201ENST00000300227 FOCADQ5VW36 1801 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 EEF2P13639 858 aaKnown RBP15.97■□□□□ 0.15
CCDC178-201ENST00000300227 LMNB1P20700 586 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 ME1P48163 572 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 JAG1P78504 1218 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 STK38Q15208 465 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 SF3A1Q15459 793 aaKnown RBP15.97■□□□□ 0.15
CCDC178-201ENST00000300227 PGBD1Q96JS3 809 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 NOVP48745 357 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 ICA1Q05084 483 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 RASA3Q14644 834 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 CCDC96Q2M329 555 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 NOSTRINQ8IVI9 506 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 ZBED3Q96IU2 234 aaPredicted RBP15.97■□□□□ 0.15
CCDC178-201ENST00000300227 ELP1O95163 1332 aa15.97■□□□□ 0.15
CCDC178-201ENST00000300227 U2AF2P26368 475 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCDC178-201ENST00000300227 NLRP5P59047 1200 aa15.96■□□□□ 0.15
CCDC178-201ENST00000300227 ZNF280AP59817 542 aaPredicted RBP15.96■□□□□ 0.15
CCDC178-201ENST00000300227 PFKFB3Q16875 520 aaPredicted RBP15.96■□□□□ 0.15
CCDC178-201ENST00000300227 HEATR3Q7Z4Q2 680 aa15.96■□□□□ 0.15
CCDC178-201ENST00000300227 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
CCDC178-201ENST00000300227 RCOR1Q9UKL0 485 aa15.96■□□□□ 0.15
CCDC178-201ENST00000300227 CABP5Q9NP86 173 aa15.96■□□□□ 0.15
CCDC178-201ENST00000300227 TMEM179Q6ZVK1 233 aa15.96■□□□□ 0.14
CCDC178-201ENST00000300227 DPF2Q92785 391 aa15.96■□□□□ 0.14
CCDC178-201ENST00000300227 HERC5Q9UII4 1024 aaKnown RBP15.96■□□□□ 0.14
CCDC178-201ENST00000300227 SYCE3A1L190 88 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 LIG1P18858 919 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 KIF4BQ2VIQ3 1234 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 ANO1Q5XXA6 986 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 ATL3Q6DD88 541 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 KCTD1Q719H9 257 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 RTEL1Q9NZ71 1219 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 FKBP1CQ5VVH2 108 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 METTL16Q86W50 562 aaKnown RBP15.95■□□□□ 0.14
CCDC178-201ENST00000300227 PHF20Q9BVI0 1012 aa15.95■□□□□ 0.14
CCDC178-201ENST00000300227 FAM205CA6NFA0 338 aa15.94■□□□□ 0.14
CCDC178-201ENST00000300227 H7C1D1 291 aa15.94■□□□□ 0.14
CCDC178-201ENST00000300227 YBX3P16989 372 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC178-201ENST00000300227 MARCKSP29966 332 aaPredicted RBP15.94■□□□□ 0.14
CCDC178-201ENST00000300227 KRT2P35908 639 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms