RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TNNI2P48788 182 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 FAM173BQ6P4H8 233 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 CSRNP1Q96S65 589 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
SDF2-201ENST00000247020 SH3GLB2Q9NR46 395 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 POLR3EQ9NVU0 708 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 NYAP2Q9P242 653 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 RCOR1Q9UKL0 485 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 SYNPO2Q9UMS6 1093 aa16.41■□□□□ 0.22
SDF2-201ENST00000247020 PRELPP51888 382 aa16.4■□□□□ 0.22
SDF2-201ENST00000247020 GNL2Q13823 731 aaKnown RBP16.4■□□□□ 0.22
SDF2-201ENST00000247020 PFKFB3Q16875 520 aaPredicted RBP16.4■□□□□ 0.22
SDF2-201ENST00000247020 TMEM179Q6ZVK1 233 aa16.4■□□□□ 0.22
SDF2-201ENST00000247020 CMTR1Q8N1G2 835 aaKnown RBP16.4■□□□□ 0.22
SDF2-201ENST00000247020 CCDC82Q8N4S0 544 aa16.4■□□□□ 0.22
SDF2-201ENST00000247020 MKL1Q969V6 931 aa16.4■□□□□ 0.22
SDF2-201ENST00000247020 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
SDF2-201ENST00000247020 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
SDF2-201ENST00000247020 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
SDF2-201ENST00000247020 TCP10L2B9ZVM9 353 aa16.39■□□□□ 0.21
SDF2-201ENST00000247020 YEATS4O95619 227 aa16.39■□□□□ 0.21
SDF2-201ENST00000247020 SCG2P13521 617 aa16.39■□□□□ 0.21
SDF2-201ENST00000247020 PHF20Q9BVI0 1012 aa16.39■□□□□ 0.21
SDF2-201ENST00000247020 BRMS1Q9HCU9 246 aa16.39■□□□□ 0.21
SDF2-201ENST00000247020 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 KIF28PB7ZC32 967 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 USP28Q96RU2 1077 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 TFIP11Q9UBB9 837 aaKnown RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 KLRF2D3W0D1 207 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 PDHBP11177 359 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 GMPSP49915 693 aaPredicted RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 MAP3K10Q02779 954 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 ABCB5Q2M3G0 1257 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 GPATCH4Q5T3I0 446 aaKnown RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 CAVIN1Q6NZI2 390 aaKnown RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 NOSTRINQ8IVI9 506 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 DIS3L2Q8IYB7 885 aaKnown RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 STAG2Q8N3U4 1231 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
SDF2-201ENST00000247020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDF2-201ENST00000247020 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 CABP5Q9NP86 173 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 CLIP2Q9UDT6 1046 aa16.38■□□□□ 0.21
SDF2-201ENST00000247020 ATAD5Q96QE3 1844 aa16.37■□□□□ 0.21
SDF2-201ENST00000247020 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
SDF2-201ENST00000247020 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
SDF2-201ENST00000247020 CALML3P27482 149 aa16.37■□□□□ 0.21
SDF2-201ENST00000247020 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
SDF2-201ENST00000247020 GALNT17Q6IS24 598 aa16.37■□□□□ 0.21
SDF2-201ENST00000247020 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
SDF2-201ENST00000247020 KCNG4Q8TDN1 519 aa16.37■□□□□ 0.21
SDF2-201ENST00000247020 KRT2P35908 639 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 NBPF9Q3BBW0 867 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 RILPL1Q5EBL4 403 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 MICALL2Q8IY33 904 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 GPC2Q8N158 579 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 SYT17Q9BSW7 474 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 RIOX1Q9H6W3 641 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
SDF2-201ENST00000247020 CNOT7Q9UIV1 285 aaKnown RBP16.36■□□□□ 0.21
SDF2-201ENST00000247020 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
SDF2-201ENST00000247020 ZNF445P59923 1031 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 ICA1Q05084 483 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 CCDC12Q8WUD4 166 aaPredicted RBP16.35■□□□□ 0.21
SDF2-201ENST00000247020 DCAF4Q8WV16 495 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 GZF1Q9H116 711 aaPredicted RBP16.35■□□□□ 0.21
SDF2-201ENST00000247020 VPS54Q9P1Q0 977 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 KCNJ14Q9UNX9 436 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 ZNF541Q9H0D2 1346 aa16.35■□□□□ 0.21
SDF2-201ENST00000247020 BAZ2BQ9UIF8 2168 aaKnown RBP16.35■□□□□ 0.21
SDF2-201ENST00000247020 BTBD18B2RXH4 712 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 H7C1D1 291 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 CYTH3O43739 400 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 LETM1O95202 739 aaPredicted RBP16.34■□□□□ 0.21
SDF2-201ENST00000247020 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 USP17L2Q6R6M4 530 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 GMCL1P1Q8NEA9 526 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 RRP36Q96EU6 259 aaKnown RBP16.34■□□□□ 0.21
SDF2-201ENST00000247020 GINM1Q9NU53 330 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 TMEM63CQ9P1W3 806 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 USP17L5A8MUK1 530 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 EEF2P13639 858 aaKnown RBP16.34■□□□□ 0.21
SDF2-201ENST00000247020 STK38Q15208 465 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 ZSCAN23Q3MJ62 389 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 CCDC183Q5T5S1 534 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms