RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Senp6Q6P7W0 1132 aa14.41□□□□□ -0.1
Trim50-202ENSMUST00000111180 Nxf7Q80SZ6 620 aaKnown RBP14.41□□□□□ -0.1
Trim50-202ENSMUST00000111180 GrapQ9CX99 217 aa14.41□□□□□ -0.1
Trim50-202ENSMUST00000111180 Clip2Q9Z0H8 1047 aa14.41□□□□□ -0.1
Trim50-202ENSMUST00000111180 Znf638Q61464 1960 aaKnown RBP14.41□□□□□ -0.1
Trim50-202ENSMUST00000111180 Cacna1fQ9JIS7 1985 aa14.41□□□□□ -0.1
Trim50-202ENSMUST00000111180 XdhQ00519 1335 aa14.41□□□□□ -0.1
Trim50-202ENSMUST00000111180 Zmym2Q9CU65 1376 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Naaladl2A0A0N4SUJ3 795 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Gm36210A0A1B0GS00 229 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Gm20425E9Q035 978 aaKnown RBP14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Rfpl4bJ3QPR6 266 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Ccnd3P30282 292 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 SrprbP47758 269 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Foxp1P58462 705 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Eif5P59325 429 aaKnown RBP14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Ncf1Q09014 390 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 LrmpQ60664 539 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Kif1bpQ6ZPU9 617 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 KhnynQ80U38 671 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Trim59Q922Y2 403 aa14.4□□□□□ -0.1
Trim50-202ENSMUST00000111180 Pus7B7ZNL8 666 aaKnown RBP14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ces1hD3Z298 562 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Gm44503E9PYU5 387 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Scg2Q03517 617 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Sox10Q04888 466 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ces5aQ6AW46 575 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Phf20l1Q8CCJ9 1013 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Mknk2Q8CDB0 459 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Rtn1Q8K0T0 780 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Gtf3c5Q8R2T8 520 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Dnaaf4Q8R368 420 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ubxn11Q9D572 484 aa14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Akap8Q9DBR0 687 aaKnown RBP14.39□□□□□ -0.11
Trim50-202ENSMUST00000111180 Gm15262A0A140LIQ5 728 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Eps15P42567 897 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Zdhhc9P59268 364 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ppm1jQ149T7 507 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Zfp953Q3UPV7 304 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Exoc8Q6PGF7 716 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Me3Q8BMF3 604 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Alg3Q8K2A8 438 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Snapc2Q91XA5 359 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Rgs19Q9CX84 216 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 SmapQ9R0P4 181 aaKnown RBP14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Rgs9O54828 675 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Nmt2O70311 529 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Stx8O88983 236 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Slc9c1Q6UJY2 1175 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Tbc1d5Q80XQ2 815 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 U2af1l4Q8BGJ9 220 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Zfp113Q8C689 439 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Wasf1Q8R5H6 559 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Bloc1s4Q8VED2 215 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Antxr1Q9CZ52 562 aa14.38□□□□□ -0.11
Trim50-202ENSMUST00000111180 Arl14Q3SXC5 192 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Cpa2Q504N0 417 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ppp1r26Q6A025 1163 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 PogkQ80TC5 607 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ift74Q8BKE9 600 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 R3hcc1Q8BSI6 488 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Bag4Q8CI61 457 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Htra3Q9D236 459 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Cd2apQ9JLQ0 637 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Cdc45Q9Z1X9 566 aa14.37□□□□□ -0.11
Trim50-202ENSMUST00000111180 Myl3P09542 204 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Usp53P15975 1069 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 NefhP19246 1090 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Mybl2P48972 704 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Nap1l2P51860 460 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Usp5P56399 858 aaKnown RBP14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Sema3eP70275 775 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 LyarQ08288 388 aaKnown RBP14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Rc3h1Q4VGL6 1130 aaKnown RBP14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Sv2cQ69ZS6 727 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Dpp8Q80YA7 892 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 OplahQ8K010 1288 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Terf2ipQ91VL8 393 aa14.36□□□□□ -0.11
Trim50-202ENSMUST00000111180 Cntnap3E9PY62 1287 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Rasa1E9PYG6 1038 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 PtpraP18052 829 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Gjb1P28230 283 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ptpn12P35831 775 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Leo1Q5XJE5 667 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Garem2Q6PAJ3 880 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Tacc1Q6Y685 774 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Amer2Q8CCJ4 672 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Gimap7Q8R379 293 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Cep89Q9CZX2 791 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Mad2l2Q9D752 211 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Clstn1Q9EPL2 979 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Atp8b3Q6UQ17 1335 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 TicrrQ8BQ33 1889 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Atrnl1Q6A051 1378 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Fndc3c1Q6DFV6 1356 aa14.35□□□□□ -0.11
Trim50-202ENSMUST00000111180 Krt28A6BLY7 462 aa14.34□□□□□ -0.11
Trim50-202ENSMUST00000111180 Zscan20B2KFW1 1030 aa14.34□□□□□ -0.11
Trim50-202ENSMUST00000111180 GnaqP21279 359 aa14.34□□□□□ -0.11
Trim50-202ENSMUST00000111180 Olfm4Q3UZZ4 505 aa14.34□□□□□ -0.11
Trim50-202ENSMUST00000111180 Ano1Q8BHY3 960 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms