RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Coq6Q8R1S0 476 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Stag3O70576 1240 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Lrrn4P59383 733 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 EspnlQ3UYR4 1005 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Fam210aQ8BGY7 273 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ttc12Q8BW49 704 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 PygbQ8CI94 843 aaKnown RBP10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Mmgt1Q8K273 131 aaKnown RBP10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Arfgap2Q99K28 520 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tceal9Q9DD24 104 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Gm28360A0A087WR25 190 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Scgb2b19J3QM75 112 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Dctn1O08788 1281 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Enc1O35709 589 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pbx1P41778 430 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Kif5bQ61768 963 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Prpf38bQ80SY5 542 aaKnown RBP10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Necab1Q8BG18 352 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Enox1Q8BHR2 643 aaKnown RBP10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Aldh1b1Q9CZS1 519 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Egfl6Q9JJZ5 550 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cxcr2P35343 359 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Asap3Q5U464 904 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pabpc4Q6PHQ9 660 aaKnown RBP10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rec8Q8C5S7 591 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rrp15Q9CYX7 281 aaKnown RBP10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cbx6Q9DBY5 414 aa10.84□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ythdc2B2RR83 1445 aaKnown RBP10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Scgb2b21A0A087WQA9 112 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Slfn9B1ARD6 910 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pde4bB1AWC9 736 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pla2g4bP0C871 782 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rab21P35282 222 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ptprn2P80560 1001 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccdc157Q5SPX1 718 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ctdp1Q7TSG2 960 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Sptlc3Q8BG54 563 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ankk1Q8BZ25 745 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rapgef3Q8VCC8 918 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Smc6Q924W5 1097 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Clic4Q9QYB1 253 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Speer2E9Q9U2 264 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ppp1r15aP17564 657 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Psmc4P54775 418 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Smcr8Q3UMB5 935 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccdc160Q3UYG1 323 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rbm26Q6NZN0 1012 aaKnown RBP10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 R3hdm2Q80TM6 1044 aaKnown RBP10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 ClasrpQ8CFC7 668 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tktl2Q9D4D4 627 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Sgf29Q9DA08 293 aaKnown RBP10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Vnn1Q9Z0K8 512 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Serpinb6cW4VSP4 379 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Bcl9Q9D219 1425 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Shank2Q80Z38 1476 aa10.83□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cdc27A2A6Q5 825 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rgs9O54828 675 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Nr1i2O54915 431 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Abi2P62484 446 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 FerP70451 823 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Slc7a1Q09143 622 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rhpn1Q61085 643 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Git1Q68FF6 770 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Sv2bQ8BG39 683 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pkn3Q8K045 878 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tcp11l2Q8K1H7 517 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fam173bQ9D1Z3 247 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 UvssaQ9D479 717 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccdc182Q9D9C6 152 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Msh5Q9QUM7 833 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tecpr2Q3UH45 1423 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fam81bA0A140LI28 432 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Odf2A3KGV1 830 aaKnown RBP10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Zc3h7bF8VPP8 982 aaKnown RBP10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ugt1a6bK9J7B2 531 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Clcn6O35454 870 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 FosbP13346 338 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Adssl1P28650 457 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Sox5P35710 763 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Alox12eP55249 662 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fhdc1Q3ULZ2 1149 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ankrd40Q5SUE8 363 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ugt1a6Q64435 531 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ugt1a7cQ6ZQM8 531 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tmem94Q7TSH8 1360 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Srgap2Q91Z67 1071 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Slc12a6Q924N4 1150 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Srfbp1Q9CZ91 441 aaKnown RBP10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Slc40a1Q9JHI9 570 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cabp2Q9JLK4 216 aa10.82□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gm1141B9EJU1 475 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 IkbkbO88351 757 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ets2P15037 468 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Serpina1bP22599 413 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Phactr1Q2M3X8 580 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pla2g4eQ50L42 875 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ankzf1Q80UU1 748 aaKnown RBP10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rassf9Q8K342 435 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rpa1Q8VEE4 623 aaKnown RBP10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ctnnbl1Q9CWL8 563 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms