Protein–RNA interactions for Protein: A0A087WQA9

Scgb2b21, ABPBG21, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b21A0A087WQA9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Scgb2b21A0A087WQA9 Gm25239-201ENSMUST00000174915 86 ntBASIC34.34■■■■□ 3.09
Scgb2b21A0A087WQA9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.42■■■□□ 2.94
Scgb2b21A0A087WQA9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Scgb2b21A0A087WQA9 Psd-208ENSMUST00000224556 2034 ntBASIC32.66■■■□□ 2.82
Scgb2b21A0A087WQA9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Scgb2b21A0A087WQA9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scgb2b21A0A087WQA9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Scgb2b21A0A087WQA9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Scgb2b21A0A087WQA9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Scgb2b21A0A087WQA9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scgb2b21A0A087WQA9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Scgb2b21A0A087WQA9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Scgb2b21A0A087WQA9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Scgb2b21A0A087WQA9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Scgb2b21A0A087WQA9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Scgb2b21A0A087WQA9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Scgb2b21A0A087WQA9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Scgb2b21A0A087WQA9 Gm15042-201ENSMUST00000120212 883 ntBASIC30.57■■■□□ 2.48
Scgb2b21A0A087WQA9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.47■■■□□ 2.47
Scgb2b21A0A087WQA9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Scgb2b21A0A087WQA9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Scgb2b21A0A087WQA9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Scgb2b21A0A087WQA9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Scgb2b21A0A087WQA9 Gm15045-201ENSMUST00000117359 883 ntBASIC29.97■■■□□ 2.39
Scgb2b21A0A087WQA9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Scgb2b21A0A087WQA9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Scgb2b21A0A087WQA9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.68■■■□□ 2.34
Scgb2b21A0A087WQA9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Scgb2b21A0A087WQA9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Scgb2b21A0A087WQA9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Scgb2b21A0A087WQA9 Gm24109-201ENSMUST00000175489 103 ntBASIC29.5■■■□□ 2.31
Scgb2b21A0A087WQA9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.47■■■□□ 2.31
Scgb2b21A0A087WQA9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Scgb2b21A0A087WQA9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.44■■■□□ 2.3
Scgb2b21A0A087WQA9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Scgb2b21A0A087WQA9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Scgb2b21A0A087WQA9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
Scgb2b21A0A087WQA9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.37■■■□□ 2.29
Scgb2b21A0A087WQA9 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.3■■■□□ 2.28
Scgb2b21A0A087WQA9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Scgb2b21A0A087WQA9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Scgb2b21A0A087WQA9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Scgb2b21A0A087WQA9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Scgb2b21A0A087WQA9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Scgb2b21A0A087WQA9 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.21■■■□□ 2.27
Scgb2b21A0A087WQA9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Scgb2b21A0A087WQA9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Scgb2b21A0A087WQA9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Scgb2b21A0A087WQA9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Scgb2b21A0A087WQA9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Scgb2b21A0A087WQA9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
Scgb2b21A0A087WQA9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Scgb2b21A0A087WQA9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Scgb2b21A0A087WQA9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.8■■■□□ 2.2
Scgb2b21A0A087WQA9 Gm23366-201ENSMUST00000175022 89 ntBASIC28.77■■■□□ 2.2
Scgb2b21A0A087WQA9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Scgb2b21A0A087WQA9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Scgb2b21A0A087WQA9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Scgb2b21A0A087WQA9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
Scgb2b21A0A087WQA9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Scgb2b21A0A087WQA9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Scgb2b21A0A087WQA9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Scgb2b21A0A087WQA9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Scgb2b21A0A087WQA9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Scgb2b21A0A087WQA9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scgb2b21A0A087WQA9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Scgb2b21A0A087WQA9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Scgb2b21A0A087WQA9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.27■■■□□ 2.12
Scgb2b21A0A087WQA9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Scgb2b21A0A087WQA9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Scgb2b21A0A087WQA9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Scgb2b21A0A087WQA9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Scgb2b21A0A087WQA9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Scgb2b21A0A087WQA9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Scgb2b21A0A087WQA9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Scgb2b21A0A087WQA9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Scgb2b21A0A087WQA9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.05■■■□□ 2.08
Scgb2b21A0A087WQA9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Scgb2b21A0A087WQA9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Scgb2b21A0A087WQA9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Scgb2b21A0A087WQA9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Scgb2b21A0A087WQA9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Scgb2b21A0A087WQA9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Scgb2b21A0A087WQA9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Scgb2b21A0A087WQA9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Scgb2b21A0A087WQA9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
Scgb2b21A0A087WQA9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.72■■■□□ 2.03
Scgb2b21A0A087WQA9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Scgb2b21A0A087WQA9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Scgb2b21A0A087WQA9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Scgb2b21A0A087WQA9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Scgb2b21A0A087WQA9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.55■■■□□ 2
Scgb2b21A0A087WQA9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.54■■■□□ 2
Scgb2b21A0A087WQA9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Scgb2b21A0A087WQA9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Scgb2b21A0A087WQA9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Scgb2b21A0A087WQA9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.5■■□□□ 1.99
Scgb2b21A0A087WQA9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Scgb2b21A0A087WQA9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms