Protein–RNA interactions for Protein: A0A087WQA9

Scgb2b21, ABPBG21, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b21A0A087WQA9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,71■■■■□ 3,15
Scgb2b21A0A087WQA9 Gm25239-201ENSMUST00000174915 86 ntBASIC34,34■■■■□ 3,09
Scgb2b21A0A087WQA9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,42■■■□□ 2,94
Scgb2b21A0A087WQA9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33,32■■■□□ 2,92
Scgb2b21A0A087WQA9 Psd-208ENSMUST00000224556 2034 ntBASIC32,66■■■□□ 2,82
Scgb2b21A0A087WQA9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32,6■■■□□ 2,81
Scgb2b21A0A087WQA9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32,16■■■□□ 2,74
Scgb2b21A0A087WQA9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,6■■■□□ 2,65
Scgb2b21A0A087WQA9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31,48■■■□□ 2,63
Scgb2b21A0A087WQA9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31,46■■■□□ 2,63
Scgb2b21A0A087WQA9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,17■■■□□ 2,58
Scgb2b21A0A087WQA9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Scgb2b21A0A087WQA9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Scgb2b21A0A087WQA9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,97■■■□□ 2,55
Scgb2b21A0A087WQA9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Scgb2b21A0A087WQA9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,75■■■□□ 2,51
Scgb2b21A0A087WQA9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Scgb2b21A0A087WQA9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Scgb2b21A0A087WQA9 Gm15042-201ENSMUST00000120212 883 ntBASIC30,57■■■□□ 2,48
Scgb2b21A0A087WQA9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,47■■■□□ 2,47
Scgb2b21A0A087WQA9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30,41■■■□□ 2,46
Scgb2b21A0A087WQA9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,18■■■□□ 2,42
Scgb2b21A0A087WQA9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30,12■■■□□ 2,41
Scgb2b21A0A087WQA9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30,08■■■□□ 2,41
Scgb2b21A0A087WQA9 Gm15045-201ENSMUST00000117359 883 ntBASIC29,97■■■□□ 2,39
Scgb2b21A0A087WQA9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Scgb2b21A0A087WQA9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Scgb2b21A0A087WQA9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,68■■■□□ 2,34
Scgb2b21A0A087WQA9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,34
Scgb2b21A0A087WQA9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,33
Scgb2b21A0A087WQA9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,62■■■□□ 2,33
Scgb2b21A0A087WQA9 Gm24109-201ENSMUST00000175489 103 ntBASIC29,5■■■□□ 2,31
Scgb2b21A0A087WQA9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29,47■■■□□ 2,31
Scgb2b21A0A087WQA9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,46■■■□□ 2,31
Scgb2b21A0A087WQA9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,44■■■□□ 2,3
Scgb2b21A0A087WQA9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
Scgb2b21A0A087WQA9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,38■■■□□ 2,29
Scgb2b21A0A087WQA9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,37■■■□□ 2,29
Scgb2b21A0A087WQA9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,37■■■□□ 2,29
Scgb2b21A0A087WQA9 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,3■■■□□ 2,28
Scgb2b21A0A087WQA9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29,29■■■□□ 2,28
Scgb2b21A0A087WQA9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,27■■■□□ 2,28
Scgb2b21A0A087WQA9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,24■■■□□ 2,27
Scgb2b21A0A087WQA9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Scgb2b21A0A087WQA9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29,21■■■□□ 2,27
Scgb2b21A0A087WQA9 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,21■■■□□ 2,27
Scgb2b21A0A087WQA9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
Scgb2b21A0A087WQA9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29,01■■■□□ 2,23
Scgb2b21A0A087WQA9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28,94■■■□□ 2,22
Scgb2b21A0A087WQA9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Scgb2b21A0A087WQA9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Scgb2b21A0A087WQA9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28,86■■■□□ 2,21
Scgb2b21A0A087WQA9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,85■■■□□ 2,21
Scgb2b21A0A087WQA9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28,84■■■□□ 2,21
Scgb2b21A0A087WQA9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,8■■■□□ 2,2
Scgb2b21A0A087WQA9 Gm23366-201ENSMUST00000175022 89 ntBASIC28,77■■■□□ 2,2
Scgb2b21A0A087WQA9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,69■■■□□ 2,18
Scgb2b21A0A087WQA9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28,64■■■□□ 2,18
Scgb2b21A0A087WQA9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Scgb2b21A0A087WQA9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28,57■■■□□ 2,16
Scgb2b21A0A087WQA9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,52■■■□□ 2,16
Scgb2b21A0A087WQA9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Scgb2b21A0A087WQA9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Scgb2b21A0A087WQA9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,14
Scgb2b21A0A087WQA9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28,44■■■□□ 2,14
Scgb2b21A0A087WQA9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Scgb2b21A0A087WQA9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Scgb2b21A0A087WQA9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Scgb2b21A0A087WQA9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28,27■■■□□ 2,12
Scgb2b21A0A087WQA9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Scgb2b21A0A087WQA9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28,18■■■□□ 2,1
Scgb2b21A0A087WQA9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,1
Scgb2b21A0A087WQA9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,13■■■□□ 2,09
Scgb2b21A0A087WQA9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28,12■■■□□ 2,09
Scgb2b21A0A087WQA9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,1■■■□□ 2,09
Scgb2b21A0A087WQA9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28,09■■■□□ 2,09
Scgb2b21A0A087WQA9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Scgb2b21A0A087WQA9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,05■■■□□ 2,08
Scgb2b21A0A087WQA9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28,01■■■□□ 2,07
Scgb2b21A0A087WQA9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27,94■■■□□ 2,06
Scgb2b21A0A087WQA9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27,91■■■□□ 2,06
Scgb2b21A0A087WQA9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,89■■■□□ 2,05
Scgb2b21A0A087WQA9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
Scgb2b21A0A087WQA9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,8■■■□□ 2,04
Scgb2b21A0A087WQA9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Scgb2b21A0A087WQA9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27,77■■■□□ 2,04
Scgb2b21A0A087WQA9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27,76■■■□□ 2,03
Scgb2b21A0A087WQA9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27,72■■■□□ 2,03
Scgb2b21A0A087WQA9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27,7■■■□□ 2,03
Scgb2b21A0A087WQA9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,63■■■□□ 2,01
Scgb2b21A0A087WQA9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27,58■■■□□ 2,01
Scgb2b21A0A087WQA9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27,58■■■□□ 2,01
Scgb2b21A0A087WQA9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27,55■■■□□ 2
Scgb2b21A0A087WQA9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27,54■■■□□ 2
Scgb2b21A0A087WQA9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27,54■■■□□ 2
Scgb2b21A0A087WQA9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
Scgb2b21A0A087WQA9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27,52■■■□□ 2
Scgb2b21A0A087WQA9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,5■■□□□ 1,99
Scgb2b21A0A087WQA9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27,48■■□□□ 1,99
Scgb2b21A0A087WQA9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Retrieved 100 of 76,532 protein–RNA pairs in 19,2 ms