RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W MRP21P38175 177 aa5.9□□□□□ -1.46
RPN7YPR108W UBX7P38349 436 aa5.9□□□□□ -1.46
RPN7YPR108W YAT2P40017 923 aa5.9□□□□□ -1.46
RPN7YPR108W RGI2P40188 164 aa5.9□□□□□ -1.46
RPN7YPR108W MEP1P40260 492 aa5.9□□□□□ -1.46
RPN7YPR108W CDC1P40986 491 aa5.9□□□□□ -1.46
RPN7YPR108W MDJ2P42834 146 aa5.9□□□□□ -1.46
RPN7YPR108W CNN1P43618 361 aa5.9□□□□□ -1.46
RPN7YPR108W RPS10BP46784 105 aaKnown RBP5.9□□□□□ -1.46
RPN7YPR108W NUP84P52891 726 aa5.9□□□□□ -1.46
RPN7YPR108W ERP6P53198 216 aa5.9□□□□□ -1.46
RPN7YPR108W NOP19P53317 196 aaPredicted RBP5.9□□□□□ -1.46
RPN7YPR108W COS6P53344 381 aa5.9□□□□□ -1.46
RPN7YPR108W BIO4P53630 237 aa5.9□□□□□ -1.46
RPN7YPR108W HST3P53687 447 aa5.9□□□□□ -1.46
RPN7YPR108W RPL34AP87262 121 aaPredicted RBP5.9□□□□□ -1.46
RPN7YPR108W PET117Q02771 107 aa5.9□□□□□ -1.46
RPN7YPR108W ELP3Q02908 557 aaKnown RBP5.9□□□□□ -1.46
RPN7YPR108W TFB2Q02939 513 aa5.9□□□□□ -1.46
RPN7YPR108W FMN1Q03778 218 aa5.9□□□□□ -1.46
RPN7YPR108W INP2Q03824 705 aa5.9□□□□□ -1.46
RPN7YPR108W TVP15Q03860 143 aa5.9□□□□□ -1.46
RPN7YPR108W RPN9Q04062 393 aaKnown RBP5.9□□□□□ -1.46
RPN7YPR108W SPG3Q04398 127 aaPredicted RBP5.9□□□□□ -1.46
RPN7YPR108W ATG38Q05789 226 aaKnown RBP5.9□□□□□ -1.46
RPN7YPR108W YLR012CQ07927 99 aa5.9□□□□□ -1.46
RPN7YPR108W RPS10AQ08745 105 aaPredicted RBP5.9□□□□□ -1.46
RPN7YPR108W LEA1Q08963 238 aaPredicted RBP5.9□□□□□ -1.46
RPN7YPR108W ADF1Q2V2Q1 113 aa5.9□□□□□ -1.46
RPN7YPR108W TPK1P06244 397 aa5.89□□□□□ -1.47
RPN7YPR108W RAD10P06838 210 aa5.89□□□□□ -1.47
RPN7YPR108W ABF1P14164 731 aa5.89□□□□□ -1.47
RPN7YPR108W REC107P21651 314 aa5.89□□□□□ -1.47
RPN7YPR108W BAS1P22035 811 aa5.89□□□□□ -1.47
RPN7YPR108W MIH1P23748 554 aa5.89□□□□□ -1.47
RPN7YPR108W NPP1P25353 742 aa5.89□□□□□ -1.47
RPN7YPR108W VAC17P25591 423 aa5.89□□□□□ -1.47
RPN7YPR108W DAL1P32375 460 aa5.89□□□□□ -1.47
RPN7YPR108W CDC3P32457 520 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W UIP5P36137 443 aa5.89□□□□□ -1.47
RPN7YPR108W TFA2P36145 328 aa5.89□□□□□ -1.47
RPN7YPR108W TGL4P36165 910 aa5.89□□□□□ -1.47
RPN7YPR108W AGP2P38090 596 aa5.89□□□□□ -1.47
RPN7YPR108W KTR4P38131 464 aa5.89□□□□□ -1.47
RPN7YPR108W KAP104P38217 918 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W POA1P38218 177 aa5.89□□□□□ -1.47
RPN7YPR108W MED8P38304 223 aa5.89□□□□□ -1.47
RPN7YPR108W RFC3P38629 340 aa5.89□□□□□ -1.47
RPN7YPR108W MSC7P38694 644 aa5.89□□□□□ -1.47
RPN7YPR108W ERP5P38819 212 aa5.89□□□□□ -1.47
RPN7YPR108W NMD3P38861 518 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W SHU2P38957 223 aa5.89□□□□□ -1.47
RPN7YPR108W HAT2P39984 401 aa5.89□□□□□ -1.47
RPN7YPR108W YER034WP40022 185 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W IST3P40565 148 aaPredicted RBP5.89□□□□□ -1.47
RPN7YPR108W UBP6P43593 499 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W DLD2P46681 530 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W SIP4P46954 829 aa5.89□□□□□ -1.47
RPN7YPR108W GCD14P46959 383 aaPredicted RBP5.89□□□□□ -1.47
RPN7YPR108W SET2P46995 733 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W TAH11P47112 604 aa5.89□□□□□ -1.47
RPN7YPR108W STB4P50104 949 aa5.89□□□□□ -1.47
RPN7YPR108W MCM6P53091 1017 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W NUT1P53114 1132 aa5.89□□□□□ -1.47
RPN7YPR108W CUS2P53830 285 aaPredicted RBP5.89□□□□□ -1.47
RPN7YPR108W CAF120P53836 1060 aa5.89□□□□□ -1.47
RPN7YPR108W SLM2P53955 656 aa5.89□□□□□ -1.47
RPN7YPR108W BET4Q00618 327 aa5.89□□□□□ -1.47
RPN7YPR108W MMT1Q03218 510 aa5.89□□□□□ -1.47
RPN7YPR108W CCE1Q03702 353 aa5.89□□□□□ -1.47
RPN7YPR108W SNU56Q03782 492 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W ATG17Q06410 417 aa5.89□□□□□ -1.47
RPN7YPR108W MRI1Q06489 411 aaKnown RBP5.89□□□□□ -1.47
RPN7YPR108W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
RPN7YPR108W SEC39Q12745 709 aa5.89□□□□□ -1.47
RPN7YPR108W RPS9AO13516 197 aaKnown RBP5.88□□□□□ -1.47
RPN7YPR108W CAR1P00812 333 aaKnown RBP5.88□□□□□ -1.47
RPN7YPR108W SBP1P10080 294 aaKnown RBP5.88□□□□□ -1.47
RPN7YPR108W MAS1P10507 462 aa5.88□□□□□ -1.47
RPN7YPR108W STE6P12866 1290 aa5.88□□□□□ -1.47
RPN7YPR108W APE1P14904 514 aa5.88□□□□□ -1.47
RPN7YPR108W PDC5P16467 563 aaKnown RBP5.88□□□□□ -1.47
RPN7YPR108W MET16P18408 261 aaPredicted RBP5.88□□□□□ -1.47
RPN7YPR108W VAN1P23642 535 aa5.88□□□□□ -1.47
RPN7YPR108W EMC1P25574 760 aa5.88□□□□□ -1.47
RPN7YPR108W YCR015CP25616 317 aa5.88□□□□□ -1.47
RPN7YPR108W GPI10P30777 616 aa5.88□□□□□ -1.47
RPN7YPR108W ZIP1P31111 875 aa5.88□□□□□ -1.47
RPN7YPR108W MF(ALPHA)2P32435 120 aa5.88□□□□□ -1.47
RPN7YPR108W SPR1P32603 445 aa5.88□□□□□ -1.47
RPN7YPR108W CYM1P32898 989 aa5.88□□□□□ -1.47
RPN7YPR108W PTH2P34222 208 aa5.88□□□□□ -1.47
RPN7YPR108W WHI3P34761 661 aaKnown RBP5.88□□□□□ -1.47
RPN7YPR108W RIM2P38127 377 aa5.88□□□□□ -1.47
RPN7YPR108W YBR032WP38223 100 aa5.88□□□□□ -1.47
RPN7YPR108W ATG12P38316 186 aa5.88□□□□□ -1.47
RPN7YPR108W ETP1P38748 585 aaKnown RBP5.88□□□□□ -1.47
RPN7YPR108W OAF1P39720 1047 aaPredicted RBP5.88□□□□□ -1.47
RPN7YPR108W EDC3P39998 551 aaKnown RBP5.88□□□□□ -1.47
RPN7YPR108W SCS2P40075 244 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 173.3 ms