RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C PGC1Q08959 321 aa7.33□□□□□ -1.24
UME1YPL139C FAP7Q12055 197 aaPredicted RBP7.33□□□□□ -1.24
UME1YPL139C YLL056CQ12177 298 aa7.33□□□□□ -1.24
UME1YPL139C SEY1Q99287 776 aa7.33□□□□□ -1.24
UME1YPL139C TRM1P15565 570 aaKnown RBP7.32□□□□□ -1.24
UME1YPL139C PMI40P29952 429 aaKnown RBP7.32□□□□□ -1.24
UME1YPL139C GCD6P32501 712 aaKnown RBP7.32□□□□□ -1.24
UME1YPL139C TYE7P33122 291 aaPredicted RBP7.32□□□□□ -1.24
UME1YPL139C DIA4P38705 446 aaPredicted RBP7.32□□□□□ -1.24
UME1YPL139C RPS0BP46654 252 aaKnown RBP7.32□□□□□ -1.24
UME1YPL139C YJR124CP47159 448 aa7.32□□□□□ -1.24
UME1YPL139C COG1P53079 417 aa7.32□□□□□ -1.24
UME1YPL139C YTP1P53584 459 aa7.32□□□□□ -1.24
UME1YPL139C CLU1Q03690 1277 aaKnown RBP7.32□□□□□ -1.24
UME1YPL139C YPR114WQ06107 315 aa7.32□□□□□ -1.24
UME1YPL139C ATG10Q07879 167 aa7.32□□□□□ -1.24
UME1YPL139C NRT1Q08485 598 aa7.32□□□□□ -1.24
UME1YPL139C PMA2P19657 947 aa7.31□□□□□ -1.24
UME1YPL139C GAL11P19659 1081 aa7.31□□□□□ -1.24
UME1YPL139C BRF1P29056 596 aa7.31□□□□□ -1.24
UME1YPL139C RAD5P32849 1169 aaPredicted RBP7.31□□□□□ -1.24
UME1YPL139C LIP5P32875 414 aa7.31□□□□□ -1.24
UME1YPL139C PBP2P38151 413 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
UME1YPL139C MSG5P38590 489 aa7.31□□□□□ -1.24
UME1YPL139C SMF1P38925 575 aa7.31□□□□□ -1.24
UME1YPL139C IST3P40565 148 aaPredicted RBP7.31□□□□□ -1.24
UME1YPL139C MND2P40577 368 aa7.31□□□□□ -1.24
UME1YPL139C APT1P49435 187 aaKnown RBP7.31□□□□□ -1.24
UME1YPL139C YDR132CQ03900 495 aa7.31□□□□□ -1.24
UME1YPL139C SLD7Q08457 257 aa7.31□□□□□ -1.24
UME1YPL139C TRE2Q08693 809 aa7.31□□□□□ -1.24
UME1YPL139C MCM16Q12262 181 aa7.31□□□□□ -1.24
UME1YPL139C AVL9Q12500 764 aa7.31□□□□□ -1.24
UME1YPL139C PET123P17558 318 aa7.3□□□□□ -1.24
UME1YPL139C MNE1P24720 663 aa7.3□□□□□ -1.24
UME1YPL139C PAT1P25644 796 aaKnown RBP7.3□□□□□ -1.24
UME1YPL139C AEP1P32493 518 aa7.3□□□□□ -1.24
UME1YPL139C MMS21P38632 267 aa7.3□□□□□ -1.24
UME1YPL139C YMR134WP40207 237 aa7.3□□□□□ -1.24
UME1YPL139C BUD13P46947 266 aaPredicted RBP7.3□□□□□ -1.24
UME1YPL139C FRE4P53746 719 aa7.3□□□□□ -1.24
UME1YPL139C YPL113CQ02961 396 aa7.3□□□□□ -1.24
UME1YPL139C YDR131CQ03899 556 aa7.3□□□□□ -1.24
UME1YPL139C POB3Q04636 552 aaKnown RBP7.3□□□□□ -1.24
UME1YPL139C AAD15Q08361 143 aa7.3□□□□□ -1.24
UME1YPL139C CUP1-1P0CX80 61 aa7.29□□□□□ -1.24
UME1YPL139C CUP1-2P0CX81 61 aa7.29□□□□□ -1.24
UME1YPL139C TSR4P25040 408 aa7.29□□□□□ -1.24
UME1YPL139C DCC1P25559 380 aa7.29□□□□□ -1.24
UME1YPL139C SRB4P32569 687 aa7.29□□□□□ -1.24
UME1YPL139C SRP101P32916 621 aa7.29□□□□□ -1.24
UME1YPL139C GND1P38720 489 aaKnown RBP7.29□□□□□ -1.24
UME1YPL139C CKB2P38930 258 aa7.29□□□□□ -1.24
UME1YPL139C SUM1P46676 1062 aa7.29□□□□□ -1.24
UME1YPL139C NMD5P46970 1048 aa7.29□□□□□ -1.24
UME1YPL139C CIS3P47001 227 aa7.29□□□□□ -1.24
UME1YPL139C SAP4P53036 818 aa7.29□□□□□ -1.24
UME1YPL139C SUN4P53616 420 aa7.29□□□□□ -1.24
UME1YPL139C SIW14P53965 281 aa7.29□□□□□ -1.24
UME1YPL139C NUP100Q02629 959 aa7.29□□□□□ -1.24
UME1YPL139C URH1Q04179 340 aa7.29□□□□□ -1.24
UME1YPL139C SML1Q04964 104 aa7.29□□□□□ -1.24
UME1YPL139C AIM41Q12032 185 aa7.29□□□□□ -1.24
UME1YPL139C SFI1Q12369 946 aa7.29□□□□□ -1.24
UME1YPL139C CDC24P11433 854 aaPredicted RBP7.28□□□□□ -1.24
UME1YPL139C GLN4P13188 809 aaKnown RBP7.28□□□□□ -1.24
UME1YPL139C SNF5P18480 905 aa7.28□□□□□ -1.24
UME1YPL139C MRPL9P31334 269 aa7.28□□□□□ -1.24
UME1YPL139C OCA5P38738 679 aa7.28□□□□□ -1.24
UME1YPL139C ACO2P39533 789 aa7.28□□□□□ -1.24
UME1YPL139C MEF2P39677 819 aa7.28□□□□□ -1.24
UME1YPL139C YFL012WP43580 148 aa7.28□□□□□ -1.24
UME1YPL139C TAH11P47112 604 aa7.28□□□□□ -1.24
UME1YPL139C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
UME1YPL139C SPC105P53148 917 aa7.28□□□□□ -1.24
UME1YPL139C CWC22P53333 577 aaKnown RBP7.28□□□□□ -1.24
UME1YPL139C YPR003CP53394 754 aa7.28□□□□□ -1.24
UME1YPL139C SWS2P53937 143 aa7.28□□□□□ -1.24
UME1YPL139C MTG1Q03151 367 aaPredicted RBP7.28□□□□□ -1.24
UME1YPL139C YMR178WQ03219 274 aaKnown RBP7.28□□□□□ -1.24
UME1YPL139C ACM1Q08981 209 aa7.28□□□□□ -1.24
UME1YPL139C RMD5Q12508 421 aa7.28□□□□□ -1.24
UME1YPL139C POL2P21951 2222 aaKnown RBP7.27□□□□□ -1.24
UME1YPL139C ERR1P0CX10 437 aa7.27□□□□□ -1.25
UME1YPL139C ERR2P0CX11 437 aa7.27□□□□□ -1.25
UME1YPL139C GID7P25569 745 aa7.27□□□□□ -1.25
UME1YPL139C ECM2P38241 364 aaKnown RBP7.27□□□□□ -1.25
UME1YPL139C LTP1P40347 161 aa7.27□□□□□ -1.25
UME1YPL139C YJL070CP40361 888 aa7.27□□□□□ -1.25
UME1YPL139C YIL108WP40483 696 aaKnown RBP7.27□□□□□ -1.25
UME1YPL139C ERR3P42222 437 aa7.27□□□□□ -1.25
UME1YPL139C RGD2P43556 714 aa7.27□□□□□ -1.25
UME1YPL139C SLU7Q02775 382 aaKnown RBP7.27□□□□□ -1.25
UME1YPL139C ECI1Q05871 280 aa7.27□□□□□ -1.25
UME1YPL139C OPT2Q06593 877 aa7.27□□□□□ -1.25
UME1YPL139C YFT2Q06676 274 aa7.27□□□□□ -1.25
UME1YPL139C APL5Q08951 932 aaKnown RBP7.27□□□□□ -1.25
UME1YPL139C YOR338WQ99326 363 aa7.27□□□□□ -1.25
UME1YPL139C SUC2P00724 532 aa7.26□□□□□ -1.25
UME1YPL139C CDC20P26309 610 aa7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms