RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W AVL9Q12500 764 aa3.71□□□□□ -1.82
MSD1YPL104W HTS1P07263 546 aaKnown RBP3.7□□□□□ -1.82
MSD1YPL104W IMA3P0CW40 589 aa3.7□□□□□ -1.82
MSD1YPL104W IMA4P0CW41 589 aa3.7□□□□□ -1.82
MSD1YPL104W SRV2P17555 526 aaKnown RBP3.7□□□□□ -1.82
MSD1YPL104W YCR015CP25616 317 aa3.7□□□□□ -1.82
MSD1YPL104W RAD5P32849 1169 aaPredicted RBP3.7□□□□□ -1.82
MSD1YPL104W TKL2P33315 681 aa3.7□□□□□ -1.82
MSD1YPL104W SLA2P33338 968 aa3.7□□□□□ -1.82
MSD1YPL104W LOS1P33418 1100 aaPredicted RBP3.7□□□□□ -1.82
MSD1YPL104W TFA2P36145 328 aa3.7□□□□□ -1.82
MSD1YPL104W DIA4P38705 446 aaPredicted RBP3.7□□□□□ -1.82
MSD1YPL104W RAD26P40352 1085 aa3.7□□□□□ -1.82
MSD1YPL104W MND2P40577 368 aa3.7□□□□□ -1.82
MSD1YPL104W LSB6P42951 607 aa3.7□□□□□ -1.82
MSD1YPL104W SPO74P45819 413 aa3.7□□□□□ -1.82
MSD1YPL104W YNL034WP53963 612 aa3.7□□□□□ -1.82
MSD1YPL104W YNL018CP53976 612 aa3.7□□□□□ -1.82
MSD1YPL104W HFD1Q04458 532 aa3.7□□□□□ -1.82
MSD1YPL104W FAR8Q05040 523 aa3.7□□□□□ -1.82
MSD1YPL104W YDL073WQ07454 984 aa3.7□□□□□ -1.82
MSD1YPL104W RCL1Q08096 367 aaPredicted RBP3.7□□□□□ -1.82
MSD1YPL104W IMA2Q08295 589 aa3.7□□□□□ -1.82
MSD1YPL104W TRE2Q08693 809 aa3.7□□□□□ -1.82
MSD1YPL104W DDC1Q08949 612 aa3.7□□□□□ -1.82
MSD1YPL104W GPM2Q12008 311 aa3.7□□□□□ -1.82
MSD1YPL104W PKH2Q12236 1081 aaKnown RBP3.7□□□□□ -1.82
MSD1YPL104W SST2P11972 698 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W CDC10P25342 322 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W URA7P28274 579 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W MLS1P30952 554 aa3.69□□□□□ -1.82
MSD1YPL104W HXT3P32466 567 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W SPC97P38863 823 aa3.69□□□□□ -1.82
MSD1YPL104W YHR202WP38887 602 aa3.69□□□□□ -1.82
MSD1YPL104W REV7P38927 245 aa3.69□□□□□ -1.82
MSD1YPL104W MGS1P40151 587 aa3.69□□□□□ -1.82
MSD1YPL104W MPH1P40562 993 aa3.69□□□□□ -1.82
MSD1YPL104W GUF1P46943 645 aa3.69□□□□□ -1.82
MSD1YPL104W SAE2P46946 345 aa3.69□□□□□ -1.82
MSD1YPL104W VTC4P47075 721 aa3.69□□□□□ -1.82
MSD1YPL104W PCL10P53124 433 aa3.69□□□□□ -1.82
MSD1YPL104W BIO5P53744 561 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W YNR065CP53751 1116 aa3.69□□□□□ -1.82
MSD1YPL104W VPS9P54787 451 aa3.69□□□□□ -1.82
MSD1YPL104W SVL3Q03088 825 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W YMR102CQ03177 834 aa3.69□□□□□ -1.82
MSD1YPL104W MTQ2Q03920 221 aaPredicted RBP3.69□□□□□ -1.82
MSD1YPL104W AAD4Q07747 329 aa3.69□□□□□ -1.82
MSD1YPL104W UBR2Q07963 1872 aa3.69□□□□□ -1.82
MSD1YPL104W YLR422WQ06409 1932 aa3.69□□□□□ -1.82
MSD1YPL104W CDC9P04819 755 aa3.69□□□□□ -1.82
MSD1YPL104W ILS1P09436 1072 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W MRPL7P36519 292 aa3.69□□□□□ -1.82
MSD1YPL104W HMT1P38074 348 aa3.69□□□□□ -1.82
MSD1YPL104W POA1P38218 177 aa3.69□□□□□ -1.82
MSD1YPL104W ATG14P38270 344 aa3.69□□□□□ -1.82
MSD1YPL104W SLX1P38324 304 aa3.69□□□□□ -1.82
MSD1YPL104W SMF2P38778 549 aa3.69□□□□□ -1.82
MSD1YPL104W NMD3P38861 518 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W AIM18P38884 321 aa3.69□□□□□ -1.82
MSD1YPL104W PRK1P40494 810 aa3.69□□□□□ -1.82
MSD1YPL104W RRT5P43607 289 aa3.69□□□□□ -1.82
MSD1YPL104W MNN11P46985 422 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W YJR098CP47139 656 aa3.69□□□□□ -1.82
MSD1YPL104W RFX1P48743 811 aa3.69□□□□□ -1.82
MSD1YPL104W HNT2P49775 206 aa3.69□□□□□ -1.82
MSD1YPL104W FOL2P51601 243 aaKnown RBP3.69□□□□□ -1.82
MSD1YPL104W MET13P53128 600 aa3.69□□□□□ -1.82
MSD1YPL104W FMP30Q02883 468 aa3.69□□□□□ -1.82
MSD1YPL104W YML119WQ03208 357 aa3.69□□□□□ -1.82
MSD1YPL104W HRD3Q05787 833 aa3.69□□□□□ -1.82
MSD1YPL104W ECM30Q06673 1274 aa3.69□□□□□ -1.82
MSD1YPL104W VHS3Q08438 674 aa3.69□□□□□ -1.82
MSD1YPL104W APM4Q99186 491 aa3.69□□□□□ -1.82
MSD1YPL104W TEF1P02994 458 aaKnown RBP3.68□□□□□ -1.82
MSD1YPL104W PAB1P04147 577 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
MSD1YPL104W KGD2P19262 463 aaPredicted RBP3.68□□□□□ -1.82
MSD1YPL104W ADK2P26364 225 aa3.68□□□□□ -1.82
MSD1YPL104W VPH1P32563 840 aaKnown RBP3.68□□□□□ -1.82
MSD1YPL104W MTC2P34246 357 aa3.68□□□□□ -1.82
MSD1YPL104W SET3P36124 751 aa3.68□□□□□ -1.82
MSD1YPL104W ALG3P38179 458 aa3.68□□□□□ -1.82
MSD1YPL104W YBR053CP38235 358 aa3.68□□□□□ -1.82
MSD1YPL104W PRM9P39551 298 aa3.68□□□□□ -1.82
MSD1YPL104W MRX1P40050 688 aa3.68□□□□□ -1.82
MSD1YPL104W AIR1P40507 360 aaKnown RBP3.68□□□□□ -1.82
MSD1YPL104W CDC1P40986 491 aa3.68□□□□□ -1.82
MSD1YPL104W TAF1P46677 1066 aa3.68□□□□□ -1.82
MSD1YPL104W IML2P47031 731 aa3.68□□□□□ -1.82
MSD1YPL104W TAH11P47112 604 aa3.68□□□□□ -1.82
MSD1YPL104W YPR003CP53394 754 aa3.68□□□□□ -1.82
MSD1YPL104W KTR6P54070 446 aa3.68□□□□□ -1.82
MSD1YPL104W ADA2Q02336 434 aa3.68□□□□□ -1.82
MSD1YPL104W INA17Q02888 182 aa3.68□□□□□ -1.82
MSD1YPL104W YMR160WQ03823 816 aa3.68□□□□□ -1.82
MSD1YPL104W AIM32Q04689 311 aa3.68□□□□□ -1.82
MSD1YPL104W GPM3Q12326 303 aa3.68□□□□□ -1.82
MSD1YPL104W HRT3Q12347 344 aa3.68□□□□□ -1.82
MSD1YPL104W EFG1Q3E705 233 aaKnown RBP3.68□□□□□ -1.82
MSD1YPL104W YOL087CQ99247 1116 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms