RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C HBT1Q07653 1046 aaKnown RBP8.64□□□□□ -1.03
PUP1YOR157C NEW1Q08972 1196 aaKnown RBP8.64□□□□□ -1.03
PUP1YOR157C IZH4Q99393 312 aa8.64□□□□□ -1.03
PUP1YOR157C HOP1P20050 605 aa8.63□□□□□ -1.03
PUP1YOR157C SIN4P32259 974 aa8.63□□□□□ -1.03
PUP1YOR157C TFA2P36145 328 aa8.63□□□□□ -1.03
PUP1YOR157C CTP1P38152 299 aa8.63□□□□□ -1.03
PUP1YOR157C CYC2P38909 366 aa8.63□□□□□ -1.03
PUP1YOR157C LYS1P38998 373 aaRIP-Chip data8.63□□□□□ -1.03not detected
PUP1YOR157C TES1P41903 349 aaKnown RBP8.63□□□□□ -1.03
PUP1YOR157C ROK1P45818 564 aaPredicted RBP8.63□□□□□ -1.03
PUP1YOR157C RIM21P48565 533 aa8.63□□□□□ -1.03
PUP1YOR157C SEY1Q99287 776 aa8.63□□□□□ -1.03
PUP1YOR157C CDC9P04819 755 aa8.62□□□□□ -1.03
PUP1YOR157C ILS1P09436 1072 aaKnown RBP8.62□□□□□ -1.03
PUP1YOR157C DCC1P25559 380 aa8.62□□□□□ -1.03
PUP1YOR157C NTH1P32356 751 aa8.62□□□□□ -1.03
PUP1YOR157C ELM1P32801 640 aa8.62□□□□□ -1.03
PUP1YOR157C PHO11P35842 467 aa8.62□□□□□ -1.03
PUP1YOR157C EMC3P36039 253 aa8.62□□□□□ -1.03
PUP1YOR157C PHO12P38693 467 aa8.62□□□□□ -1.03
PUP1YOR157C ERP2P39704 215 aa8.62□□□□□ -1.03
PUP1YOR157C KHA1P40309 873 aa8.62□□□□□ -1.03
PUP1YOR157C RPL34BP40525 121 aaKnown RBP8.62□□□□□ -1.03
PUP1YOR157C IST3P40565 148 aaPredicted RBP8.62□□□□□ -1.03
PUP1YOR157C MVP1P40959 511 aaKnown RBP8.62□□□□□ -1.03
PUP1YOR157C MMM1P41800 426 aa8.62□□□□□ -1.03
PUP1YOR157C YGR111WP53265 400 aa8.62□□□□□ -1.03
PUP1YOR157C YNL108CP53929 270 aa8.62□□□□□ -1.03
PUP1YOR157C PEX25Q02969 394 aa8.62□□□□□ -1.03
PUP1YOR157C ARX1Q03862 593 aaKnown RBP8.62□□□□□ -1.03
PUP1YOR157C SMF3Q12078 473 aaPredicted RBP8.62□□□□□ -1.03
PUP1YOR157C RRP12Q12754 1228 aaKnown RBP8.62□□□□□ -1.03
PUP1YOR157C PLC1P32383 869 aa8.61□□□□□ -1.03
PUP1YOR157C HOG1P32485 435 aa8.61□□□□□ -1.03
PUP1YOR157C GMH1P36125 273 aa8.61□□□□□ -1.03
PUP1YOR157C RPH1P39956 796 aa8.61□□□□□ -1.03
PUP1YOR157C LRO1P40345 661 aa8.61□□□□□ -1.03
PUP1YOR157C YFR018CP43599 363 aa8.61□□□□□ -1.03
PUP1YOR157C YJR030CP47101 745 aa8.61□□□□□ -1.03
PUP1YOR157C HLJ1P48353 224 aa8.61□□□□□ -1.03
PUP1YOR157C COG1P53079 417 aa8.61□□□□□ -1.03
PUP1YOR157C RTS3P53289 263 aa8.61□□□□□ -1.03
PUP1YOR157C ARE2P53629 642 aaKnown RBP8.61□□□□□ -1.03
PUP1YOR157C YNL092WP53934 400 aa8.61□□□□□ -1.03
PUP1YOR157C ADE12P80210 433 aaKnown RBP8.61□□□□□ -1.03
PUP1YOR157C CIA1Q05583 330 aa8.61□□□□□ -1.03
PUP1YOR157C BMT6Q12291 365 aa8.61□□□□□ -1.03
PUP1YOR157C GSY2P27472 705 aa8.6□□□□□ -1.03
PUP1YOR157C SPS19P32573 292 aaKnown RBP8.6□□□□□ -1.03
PUP1YOR157C SKN1P33336 771 aa8.6□□□□□ -1.03
PUP1YOR157C MTG2P38860 518 aa8.6□□□□□ -1.03
PUP1YOR157C AIM18P38884 321 aa8.6□□□□□ -1.03
PUP1YOR157C STR3P53101 465 aaKnown RBP8.6□□□□□ -1.03
PUP1YOR157C VPS9P54787 451 aa8.6□□□□□ -1.03
PUP1YOR157C ARP4P80428 489 aa8.6□□□□□ -1.03
PUP1YOR157C ENT5Q03769 411 aaKnown RBP8.6□□□□□ -1.03
PUP1YOR157C CDA1Q06702 301 aa8.6□□□□□ -1.03
PUP1YOR157C HSP42Q12329 375 aa8.6□□□□□ -1.03
PUP1YOR157C RPS6AP0CX37 236 aaKnown RBP8.59□□□□□ -1.03
PUP1YOR157C RPS6BP0CX38 236 aaPredicted RBP8.59□□□□□ -1.03
PUP1YOR157C APA1P16550 321 aaKnown RBP8.59□□□□□ -1.03
PUP1YOR157C AEP1P32493 518 aa8.59□□□□□ -1.03
PUP1YOR157C DOM34P33309 386 aa8.59□□□□□ -1.03
PUP1YOR157C PCL5P38794 229 aa8.59□□□□□ -1.03
PUP1YOR157C STN1P38960 494 aa8.59□□□□□ -1.03
PUP1YOR157C PTC2P39966 464 aaKnown RBP8.59□□□□□ -1.03
PUP1YOR157C ELO3P40319 345 aa8.59□□□□□ -1.03
PUP1YOR157C BUD13P46947 266 aaPredicted RBP8.59□□□□□ -1.03
PUP1YOR157C LDB18Q07887 179 aa8.59□□□□□ -1.03
PUP1YOR157C YLR030WQ07967 263 aa8.59□□□□□ -1.03
PUP1YOR157C BCY1P07278 416 aaKnown RBP8.58□□□□□ -1.04
PUP1YOR157C MCM2P29469 868 aa8.58□□□□□ -1.04
PUP1YOR157C SHM1P37292 490 aaPredicted RBP8.58□□□□□ -1.04
PUP1YOR157C NCL1P38205 684 aaKnown RBP8.58□□□□□ -1.04
PUP1YOR157C OTU2P38747 307 aaKnown RBP8.58□□□□□ -1.04
PUP1YOR157C RGD2P43556 714 aa8.58□□□□□ -1.04
PUP1YOR157C HST1P53685 503 aa8.58□□□□□ -1.04
PUP1YOR157C TPO1Q07824 586 aa8.58□□□□□ -1.04
PUP1YOR157C TMA16Q08687 178 aa8.58□□□□□ -1.04
PUP1YOR157C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
PUP1YOR157C YCL042WP25572 119 aa8.57□□□□□ -1.04
PUP1YOR157C VAC17P25591 423 aa8.57□□□□□ -1.04
PUP1YOR157C YCR015CP25616 317 aa8.57□□□□□ -1.04
PUP1YOR157C JNM1P36224 373 aa8.57□□□□□ -1.04
PUP1YOR157C MRPL37P36532 105 aa8.57□□□□□ -1.04
PUP1YOR157C PSY4P38193 441 aa8.57□□□□□ -1.04
PUP1YOR157C YHR210CP38893 341 aa8.57□□□□□ -1.04
PUP1YOR157C BDH2P39713 417 aa8.57□□□□□ -1.04
PUP1YOR157C HXT8P40886 569 aa8.57□□□□□ -1.04
PUP1YOR157C VNX1P42839 908 aa8.57□□□□□ -1.04
PUP1YOR157C SAP4P53036 818 aa8.57□□□□□ -1.04
PUP1YOR157C GND2P53319 492 aa8.57□□□□□ -1.04
PUP1YOR157C YDR132CQ03900 495 aa8.57□□□□□ -1.04
PUP1YOR157C FMP45Q07651 309 aa8.57□□□□□ -1.04
PUP1YOR157C APC11Q12157 165 aa8.57□□□□□ -1.04
PUP1YOR157C AI5_ALPHAQ9ZZX1 630 aa8.57□□□□□ -1.04
PUP1YOR157C CPA1P07258 411 aaKnown RBP8.56□□□□□ -1.04
PUP1YOR157C ACO1P19414 778 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
PUP1YOR157C SFL1P20134 766 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms