RNA–Protein interactions for RNA: YOR004W

UTP23, Transcript of Component of the small subunit processome, yeast

Gene UTP23, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP23	YOR004W	SDA1	P53313	767 aa	Known RBP	4.14	□□□□□ -1.75
UTP23	YOR004W	ATG4	P53867	494 aa		4.14	□□□□□ -1.75
UTP23	YOR004W	UGO1	Q03327	502 aa		4.14	□□□□□ -1.75
UTP23	YOR004W	USA1	Q03714	838 aa		4.14	□□□□□ -1.75
UTP23	YOR004W	HMO1	Q03973	246 aa	Known RBP	4.14	□□□□□ -1.75
UTP23	YOR004W	HFD1	Q04458	532 aa		4.14	□□□□□ -1.75
UTP23	YOR004W	TMA64	Q04600	565 aa	Known RBP	4.14	□□□□□ -1.75
UTP23	YOR004W	YDR341C	Q05506	607 aa	Known RBP	4.14	□□□□□ -1.75
UTP23	YOR004W	CLF1	Q12309	687 aa	Predicted RBP	4.14	□□□□□ -1.75
UTP23	YOR004W	HIF1	Q12373	385 aa		4.14	□□□□□ -1.75
UTP23	YOR004W	YOR111W	Q99210	232 aa		4.14	□□□□□ -1.75
UTP23	YOR004W	CIT2	P08679	460 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	TUP1	P16649	713 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	PWP1	P21304	576 aa	Known RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	PEX1	P24004	1043 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	SIN4	P32259	974 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	VPH2	P32341	215 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	PEX6	P33760	1030 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	SAS3	P34218	831 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	YKL133C	P36066	463 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	FLO10	P36170	1169 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	UBS1	P38290	277 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	ERG7	P38604	731 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	TOM71	P38825	639 aa	Known RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	CRP1	P38845	465 aa	Known RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	STT3	P39007	718 aa	Known RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	GET2	P40056	285 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	GID8	P40208	455 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	GCN20	P43535	752 aa	Known RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	SET2	P46995	733 aa	Known RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	RET3	P53600	189 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	ASI1	P54074	624 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	SHR3	Q02774	210 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	GIR2	Q03768	265 aa	Predicted RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	YMR018W	Q04364	514 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	MYO5	Q04439	1219 aa	Known RBP	4.13	□□□□□ -1.75
UTP23	YOR004W	GTB1	Q04924	702 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	TAF9	Q05027	157 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	COQ11	Q05892	277 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	MLH3	Q12083	715 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	OCA6	Q12454	224 aa		4.13	□□□□□ -1.75
UTP23	YOR004W	RIM15	P43565	1770 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	RPN13	O13563	156 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	CHO2	P05374	869 aa	Known RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	ERG11	P10614	530 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	TYR1	P20049	452 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	CCR4	P31384	837 aa	Known RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	THI4	P32318	326 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	PLC1	P32383	869 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	SSE1	P32589	693 aa	Known RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	EMP70	P32802	667 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	MRE11	P32829	692 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	YBL055C	P34220	418 aa	Predicted RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	BLI1	P35727	113 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	LHS1	P36016	881 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	JNM1	P36224	373 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	YBR062C	P38239	180 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	MMS21	P38632	267 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	DOT6	P40059	670 aa	Known RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	VID27	P40157	782 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	INA22	P40576	216 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	BRO1	P48582	844 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	UBC9	P50623	157 aa	Predicted RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	CPR6	P53691	371 aa	Known RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	BET4	Q00618	327 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	MDM1	Q01846	1127 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	ARO80	Q04052	950 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	YKU80	Q04437	629 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	RGC1	Q06108	1083 aa	Known RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	ORM2	Q06144	216 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	VIP1	Q06685	1146 aa	Known RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	SIL1	Q08199	421 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	DIA2	Q08496	732 aa	Predicted RBP	4.12	□□□□□ -1.75
UTP23	YOR004W	AIM41	Q12032	185 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	YNL162W-A	Q3E7A8	72 aa		4.12	□□□□□ -1.75
UTP23	YOR004W	RAD18	P10862	487 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	PEP5	P12868	1029 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	SNA3	P14359	133 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	POL3	P15436	1097 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	REC107	P21651	314 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	EUG1	P32474	517 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	CBF2	P32504	956 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	TOA1	P32773	286 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	SER1	P33330	395 aa	Known RBP	4.11	□□□□□ -1.75
UTP23	YOR004W	RRP14	P36080	434 aa	Known RBP	4.11	□□□□□ -1.75
UTP23	YOR004W	HSM3	P38348	480 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	TDA11	P38854	504 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	SPC72	P39723	622 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	YEL020C	P39994	560 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	ALG5	P40350	334 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	SEC27	P41811	889 aa	Known RBP	4.11	□□□□□ -1.75
UTP23	YOR004W	NOP9	P47077	666 aa	Known RBP	4.11	□□□□□ -1.75
UTP23	YOR004W	COS5	P47187	383 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	COX18	P53239	316 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	JJJ1	P53863	590 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	ARP4	P80428	489 aa		4.11	□□□□□ -1.75
UTP23	YOR004W	UTP6	Q02354	440 aa	Known RBP	4.11	□□□□□ -1.75
UTP23	YOR004W	MTG1	Q03151	367 aa	Predicted RBP	4.11	□□□□□ -1.75
UTP23	YOR004W	PRP42	Q03776	544 aa	Known RBP	4.11	□□□□□ -1.75
UTP23	YOR004W	NDL1	Q06568	189 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms