RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C TFC4P33339 1025 aa3.43□□□□□ -1.86
ATG3YNR007C PXL1P36166 706 aa3.43□□□□□ -1.86
ATG3YNR007C FAT1P38225 669 aa3.43□□□□□ -1.86
ATG3YNR007C SRP68P38687 599 aaKnown RBP3.43□□□□□ -1.86
ATG3YNR007C YJL193WP39542 402 aa3.43□□□□□ -1.86
ATG3YNR007C YIL089WP40500 205 aa3.43□□□□□ -1.86
ATG3YNR007C SAE2P46946 345 aa3.43□□□□□ -1.86
ATG3YNR007C PRP42Q03776 544 aaKnown RBP3.43□□□□□ -1.86
ATG3YNR007C PHM6Q05637 104 aa3.43□□□□□ -1.86
ATG3YNR007C YPR089WO13585 888 aa3.42□□□□□ -1.86
ATG3YNR007C PIF1P07271 859 aa3.42□□□□□ -1.86
ATG3YNR007C MRP7P12687 371 aa3.42□□□□□ -1.86
ATG3YNR007C YAP1P19880 650 aaKnown RBP3.42□□□□□ -1.86
ATG3YNR007C NUP133P36161 1157 aa3.42□□□□□ -1.86
ATG3YNR007C YIL092WP40497 633 aa3.42□□□□□ -1.86
ATG3YNR007C HOL1P53389 586 aa3.42□□□□□ -1.86
ATG3YNR007C TRM44Q02648 567 aaKnown RBP3.42□□□□□ -1.86
ATG3YNR007C ENT2Q05785 613 aa3.42□□□□□ -1.86
ATG3YNR007C PCL8Q08966 492 aa3.42□□□□□ -1.86
ATG3YNR007C SLX4Q12098 748 aa3.42□□□□□ -1.86
ATG3YNR007C HPR1P17629 752 aaKnown RBP3.41□□□□□ -1.86
ATG3YNR007C YJU2P28320 278 aaPredicted RBP3.41□□□□□ -1.86
ATG3YNR007C DGR2P32330 852 aa3.41□□□□□ -1.86
ATG3YNR007C DAL3P32459 195 aa3.41□□□□□ -1.86
ATG3YNR007C VPS27P40343 622 aaKnown RBP3.41□□□□□ -1.86
ATG3YNR007C RRP46P53256 223 aaPredicted RBP3.41□□□□□ -1.86
ATG3YNR007C SND1Q04007 877 aa3.41□□□□□ -1.86
ATG3YNR007C RBA50Q04418 439 aa3.41□□□□□ -1.86
ATG3YNR007C HRD3Q05787 833 aa3.41□□□□□ -1.86
ATG3YNR007C TPO3Q06451 622 aa3.41□□□□□ -1.86
ATG3YNR007C YDL144CQ07589 356 aa3.41□□□□□ -1.86
ATG3YNR007C AHA1Q12449 350 aaKnown RBP3.41□□□□□ -1.86
ATG3YNR007C PRP8P33334 2413 aaKnown RBP3.41□□□□□ -1.86
ATG3YNR007C BI2P03873 423 aa3.4□□□□□ -1.87
ATG3YNR007C YMR085WP0CF18 432 aa3.4□□□□□ -1.87
ATG3YNR007C RMA1P36001 430 aaKnown RBP3.4□□□□□ -1.87
ATG3YNR007C APE3P37302 537 aaKnown RBP3.4□□□□□ -1.87
ATG3YNR007C SSP120P39931 234 aaKnown RBP3.4□□□□□ -1.87
ATG3YNR007C TPM2P40414 161 aa3.4□□□□□ -1.87
ATG3YNR007C MPP10P47083 593 aaKnown RBP3.4□□□□□ -1.87
ATG3YNR007C LSC1P53598 329 aaKnown RBP3.4□□□□□ -1.87
ATG3YNR007C YNL034WP53963 612 aa3.4□□□□□ -1.87
ATG3YNR007C TGL2P54857 326 aa3.4□□□□□ -1.87
ATG3YNR007C YPL071CQ02864 156 aa3.4□□□□□ -1.87
ATG3YNR007C MRPL1Q04599 285 aa3.4□□□□□ -1.87
ATG3YNR007C CDC45Q08032 650 aa3.4□□□□□ -1.87
ATG3YNR007C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
ATG3YNR007C SWI1P09547 1314 aa3.4□□□□□ -1.87
ATG3YNR007C SST2P11972 698 aaKnown RBP3.39□□□□□ -1.87
ATG3YNR007C YPK1P12688 680 aaKnown RBP3.39□□□□□ -1.87
ATG3YNR007C MGM1P32266 881 aa3.39□□□□□ -1.87
ATG3YNR007C NIC96P34077 839 aa3.39□□□□□ -1.87
ATG3YNR007C VAB2P40003 282 aa3.39□□□□□ -1.87
ATG3YNR007C YIL024CP40543 189 aa3.39□□□□□ -1.87
ATG3YNR007C CFD1P40558 293 aa3.39□□□□□ -1.87
ATG3YNR007C IRC5P43610 853 aa3.39□□□□□ -1.87
ATG3YNR007C IRC7P43623 340 aa3.39□□□□□ -1.87
ATG3YNR007C RTS3P53289 263 aa3.39□□□□□ -1.87
ATG3YNR007C CNM67P53865 581 aaKnown RBP3.39□□□□□ -1.87
ATG3YNR007C RTT109Q07794 436 aa3.39□□□□□ -1.87
ATG3YNR007C NGL1Q08213 363 aaKnown RBP3.39□□□□□ -1.87
ATG3YNR007C NEW1Q08972 1196 aaKnown RBP3.39□□□□□ -1.87
ATG3YNR007C CSR2Q12734 1121 aa3.39□□□□□ -1.87
ATG3YNR007C NCB2Q92317 146 aa3.39□□□□□ -1.87
ATG3YNR007C VPS5Q92331 675 aa3.39□□□□□ -1.87
ATG3YNR007C CBP1P07252 654 aa3.38□□□□□ -1.87
ATG3YNR007C RPS19AP07280 144 aaKnown RBP3.38□□□□□ -1.87
ATG3YNR007C RPS19BP07281 144 aaPredicted RBP3.38□□□□□ -1.87
ATG3YNR007C SEC12P11655 471 aa3.38□□□□□ -1.87
ATG3YNR007C BET2P20133 325 aa3.38□□□□□ -1.87
ATG3YNR007C ATP12P22135 325 aa3.38□□□□□ -1.87
ATG3YNR007C HXT4P32467 576 aa3.38□□□□□ -1.87
ATG3YNR007C DSS4P32601 143 aa3.38□□□□□ -1.87
ATG3YNR007C YMR124WP39523 943 aaKnown RBP3.38□□□□□ -1.87
ATG3YNR007C PES4P39684 611 aa3.38□□□□□ -1.87
ATG3YNR007C STL1P39932 569 aa3.38□□□□□ -1.87
ATG3YNR007C TAN1P53072 289 aaPredicted RBP3.38□□□□□ -1.87
ATG3YNR007C PEF1P53238 335 aa3.38□□□□□ -1.87
ATG3YNR007C YNL058CP53947 316 aa3.38□□□□□ -1.87
ATG3YNR007C ZDS2P54786 942 aa3.38□□□□□ -1.87
ATG3YNR007C MTD1Q02046 320 aaKnown RBP3.38□□□□□ -1.87
ATG3YNR007C NUP53Q03790 475 aa3.38□□□□□ -1.87
ATG3YNR007C THI3Q07471 609 aa3.38□□□□□ -1.87
ATG3YNR007C CRT10Q08226 957 aa3.38□□□□□ -1.87
ATG3YNR007C YOR378WQ08902 515 aa3.38□□□□□ -1.87
ATG3YNR007C TY3A-GQ12173 290 aa3.38□□□□□ -1.87
ATG3YNR007C HER1Q12276 1246 aa3.38□□□□□ -1.87
ATG3YNR007C TY3A-IQ99219 290 aa3.38□□□□□ -1.87
ATG3YNR007C HKR1P41809 1802 aa3.37□□□□□ -1.87
ATG3YNR007C CYB2P00175 591 aa3.37□□□□□ -1.87
ATG3YNR007C YER190C-BP0CX94 160 aa3.37□□□□□ -1.87
ATG3YNR007C YEL077W-AP0CX95 160 aa3.37□□□□□ -1.87
ATG3YNR007C YGR296C-BP0CX96 160 aa3.37□□□□□ -1.87
ATG3YNR007C YPL283W-BP0CX97 160 aa3.37□□□□□ -1.87
ATG3YNR007C YPR204C-AP0CX98 160 aa3.37□□□□□ -1.87
ATG3YNR007C PCK1P10963 549 aa3.37□□□□□ -1.87
ATG3YNR007C PTP2P29461 750 aa3.37□□□□□ -1.87
ATG3YNR007C SDS22P36047 338 aa3.37□□□□□ -1.87
ATG3YNR007C FUN12P39730 1002 aaKnown RBP3.37□□□□□ -1.87
ATG3YNR007C LYS14P40971 790 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms