RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC2	YNL272C	YNL018C	P53976	612 aa		4.21	□□□□□ -1.74
SEC2	YNL272C	ELP3	Q02908	557 aa	Known RBP	4.21	□□□□□ -1.74
SEC2	YNL272C	TAF9	Q05027	157 aa		4.21	□□□□□ -1.74
SEC2	YNL272C	NBP2	Q12163	236 aa		4.21	□□□□□ -1.74
SEC2	YNL272C	SPE1	P08432	466 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	POL3	P15436	1097 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	AEP2	P22136	580 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	TRX1	P22217	103 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	SRB2	P34162	210 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	TSA1	P34760	196 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	YKR078W	P36158	585 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	STB5	P38699	743 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	SMF1	P38925	575 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	SPC72	P39723	622 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	YER189W	P40104	122 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	NOG2	P53742	486 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	AIM39	Q08223	395 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	YLR462W	O13556	202 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	KIN2	P13186	1147 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	PAP1	P29468	568 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	SEC1	P30619	724 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	REC104	P33323	182 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	YBR053C	P38235	358 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	HSL7	P38274	827 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	YBR238C	P38330	731 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	YHL049C	P38722	271 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	LCP5	P40079	357 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	YFL064C	P43540	174 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	GUF1	P46943	645 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	VPS25	P47142	202 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	MRPL22	P53881	309 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	MTD1	Q02046	320 aa	Known RBP	4.2	□□□□□ -1.74
SEC2	YNL272C	GCN5	Q03330	439 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	HER2	Q03557	464 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	ATG16	Q03818	150 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	THI20	Q08224	551 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	YBL111C	Q3E7Y5	667 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	YDR034W-B	Q6Q5X2	51 aa		4.2	□□□□□ -1.74
SEC2	YNL272C	ADE3	P07245	946 aa	Known RBP	4.19	□□□□□ -1.74
SEC2	YNL272C	PUT4	P15380	627 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	EST1	P17214	699 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC2	YNL272C	PPG1	P32838	368 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	SRP101	P32916	621 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	KHA1	P40309	873 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	SAP185	P40856	1058 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	GYP8	P43570	497 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	CWC22	P53333	577 aa	Known RBP	4.19	□□□□□ -1.74
SEC2	YNL272C	INA17	Q02888	182 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	ROT1	Q03691	256 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	SXM1	Q04175	944 aa	Known RBP	4.19	□□□□□ -1.74
SEC2	YNL272C	IVY1	Q04934	453 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	HRD3	Q05787	833 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	CDA1	Q06702	301 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	YLR125W	Q12138	136 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	ZRT2	Q12436	422 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	VPS5	Q92331	675 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	SYN8	P31377	255 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	DOM34	P33309	386 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	YBL055C	P34220	418 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC2	YNL272C	RCK2	P38623	610 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	RIM4	P38741	713 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	GDH3	P39708	457 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	YIL054W	P40524	105 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	CEG1	Q01159	459 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC2	YNL272C	SPG3	Q04398	127 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC2	YNL272C	UFO1	Q04511	668 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	PIG1	Q06216	648 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	YPR196W	Q06595	470 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	ENV7	Q12003	364 aa		4.19	□□□□□ -1.74
SEC2	YNL272C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SEC2	YNL272C	YBR225W	P38321	900 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	SWC5	P38326	303 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	FHL1	P39521	936 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	HSV2	P50079	448 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC2	YNL272C	YGR283C	P53336	341 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC2	YNL272C	BET4	Q00618	327 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	VPS60	Q03390	229 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	ERV41	Q04651	352 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	ECM22	Q05958	814 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC2	YNL272C	ARP7	Q12406	477 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	YKR051W	P36142	418 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	LYS9	P38999	446 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	MKT1	P40850	830 aa	Known RBP	4.18	□□□□□ -1.74
SEC2	YNL272C	RPC17	P47076	161 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	ECL1	P48235	211 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	SNO2	P53823	222 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	YNL144C	P53907	740 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	YNL040W	P53960	456 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC2	YNL272C	URH1	Q04179	340 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	POB3	Q04636	552 aa	Known RBP	4.18	□□□□□ -1.74
SEC2	YNL272C	CDA2	Q06703	312 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	APC5	Q08683	685 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	THI21	Q08975	551 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	AIM41	Q12032	185 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	NDJ1	Q12366	352 aa		4.18	□□□□□ -1.74
SEC2	YNL272C	PMS1	P14242	873 aa		4.17	□□□□□ -1.74
SEC2	YNL272C	PEX34	P25584	144 aa		4.17	□□□□□ -1.74
SEC2	YNL272C	CAP1	P28495	268 aa	Known RBP	4.17	□□□□□ -1.74
SEC2	YNL272C	MEI4	P29467	408 aa		4.17	□□□□□ -1.74
SEC2	YNL272C	RAD16	P31244	790 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms