RNA–Protein interactions for RNA: YNL078W

NIS1, Transcript of Protein localized in the bud neck at G2/M phase, yeast

Gene NIS1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIS1	YNL078W	SEC9	P40357	651 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	TFG2	P41896	400 aa	Predicted RBP	4.18	□□□□□ -1.74
NIS1	YNL078W	MIC19	P43594	170 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	YJR079W	P47126	109 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	MRK1	P50873	501 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	CPR8	P53728	308 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	VPS75	P53853	264 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	BOP3	P53958	396 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	USA1	Q03714	838 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	STE23	Q06010	1027 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	ATG23	Q06671	453 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	TMA16	Q08687	178 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	MPD2	Q99316	277 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	APC1	P53886	1748 aa		4.18	□□□□□ -1.74
NIS1	YNL078W	ADE6	P38972	1358 aa	Known RBP	4.17	□□□□□ -1.74
NIS1	YNL078W	RPA135	P22138	1203 aa	Known RBP	4.17	□□□□□ -1.74
NIS1	YNL078W	ILV6	P25605	309 aa	Known RBP	4.17	□□□□□ -1.74
NIS1	YNL078W	RAD16	P31244	790 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	SWC3	P31376	625 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	UGP1	P32861	499 aa	Known RBP	4.17	□□□□□ -1.74
NIS1	YNL078W	CUE2	P36075	443 aa	Known RBP	4.17	□□□□□ -1.74
NIS1	YNL078W	YSW1	P38280	609 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	VPS8	P39702	1274 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	ATF1	P40353	525 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	IAH1	P41734	238 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	MDR1	P53258	950 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	VTC3	Q02725	835 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	ARO80	Q04052	950 aa		4.17	□□□□□ -1.74
NIS1	YNL078W	RUD3	Q12234	484 aa	Known RBP	4.17	□□□□□ -1.74
NIS1	YNL078W	TMA7	Q3E764	64 aa	Known RBP	4.17	□□□□□ -1.74
NIS1	YNL078W	KAR3	P17119	729 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	PHO13	P19881	312 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	MCM4	P30665	933 aa	Known RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	PET309	P32522	965 aa	Predicted RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	DSS4	P32601	143 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
NIS1	YNL078W	PIH1	P38768	344 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	CAJ1	P39101	391 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	SCS2	P40075	244 aa	Known RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	PUS4	P48567	403 aa	Known RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	CNM67	P53865	581 aa	Known RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	ALF1	P53904	254 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	NCS2	P53923	493 aa	Predicted RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	SEC5	P89102	971 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	CEG1	Q01159	459 aa	Predicted RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	LGE1	Q02796	332 aa	Known RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	NDL1	Q06568	189 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	YPL216W	Q08964	1102 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	NDJ1	Q12366	352 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	DBP10	Q12389	995 aa	Known RBP	4.16	□□□□□ -1.74
NIS1	YNL078W	ZPS1	Q12512	249 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	SMC6	Q12749	1114 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	YRF1-2	P40105	1681 aa		4.16	□□□□□ -1.74
NIS1	YNL078W	SUP35	P05453	685 aa	Known RBP	4.15	□□□□□ -1.75
NIS1	YNL078W	RAD1	P06777	1100 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	ADE5,7	P07244	802 aa	Known RBP	4.15	□□□□□ -1.75
NIS1	YNL078W	AAD3	P25612	363 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	PSO2	P30620	661 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	YEL043W	P32618	956 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	TGL1	P34163	548 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	YPT53	P36019	220 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	CCL1	P37366	393 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	GRX7	P38068	203 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	RFT1	P38206	574 aa	Predicted RBP	4.15	□□□□□ -1.75
NIS1	YNL078W	SSP120	P39931	234 aa	Known RBP	4.15	□□□□□ -1.75
NIS1	YNL078W	MRX1	P40050	688 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	SPO22	P40511	975 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	SAP4	P53036	818 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	COS12	P53053	380 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	COQ6	P53318	479 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	VPS38	Q05919	439 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	YLR177W	Q06251	628 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	CIR2	Q08822	631 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
NIS1	YNL078W	ULA1	Q12059	462 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	NUR1	Q12066	484 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	HOS1	Q12214	470 aa		4.15	□□□□□ -1.75
NIS1	YNL078W	PGA3	Q12746	312 aa	Known RBP	4.15	□□□□□ -1.75
NIS1	YNL078W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.15	□□□□□ -1.75
NIS1	YNL078W	ADH4	P10127	382 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	TPM1	P17536	199 aa	Known RBP	4.14	□□□□□ -1.75
NIS1	YNL078W	PMA2	P19657	947 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	PHO3	P24031	467 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	NUF2	P33895	451 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	YKT6	P36015	200 aa	Known RBP	4.14	□□□□□ -1.75
NIS1	YNL078W	KTR3	P38130	404 aa	Predicted RBP	4.14	□□□□□ -1.75
NIS1	YNL078W	STB5	P38699	743 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	SMF1	P38925	575 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	BUD16	P39988	312 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	TRS85	P46944	698 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	IMO32	P53219	342 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	ACS1	Q01574	713 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	HOF1	Q05080	669 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	YDL073W	Q07454	984 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	NOP6	Q07623	225 aa	Known RBP	4.14	□□□□□ -1.75
NIS1	YNL078W	RLP24	Q07915	199 aa	Known RBP	4.14	□□□□□ -1.75
NIS1	YNL078W	PSK2	Q08217	1101 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	ABP140	Q08641	628 aa	Known RBP	4.14	□□□□□ -1.75
NIS1	YNL078W	PSF3	Q12146	194 aa		4.14	□□□□□ -1.75
NIS1	YNL078W	RRP5	Q05022	1729 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms