RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	PDH1	Q12428	516 aa	Known RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	YML003W	P0CF16	290 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	PDE1	P22434	369 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	BRF1	P29056	596 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	YBR053C	P38235	358 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	VID24	P38263	362 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	GDI1	P39958	451 aa	Known RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	SEC28	P40509	296 aa	Known RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	IMO32	P53219	342 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	ART5	P53244	586 aa	Known RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	MRPL22	P53881	309 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	DLT1	Q04216	342 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	YPL191C	Q08930	360 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	SMF3	Q12078	473 aa	Predicted RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	PRS5	Q12265	496 aa	Known RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	YPT6	Q99260	215 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	CDC15	P27636	974 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	APE3	P37302	537 aa	Known RBP	4.9	□□□□□ -1.63
BDP1	YNL039W	CTP1	P38152	299 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
BDP1	YNL039W	LYS4	P49367	693 aa	Predicted RBP	4.9	□□□□□ -1.63
BDP1	YNL039W	UBC11	P52492	156 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	LCL3	P53153	274 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	PEX25	Q02969	394 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	YML037C	Q03703	340 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	ESC8	Q08119	714 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	MED7	Q08278	222 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	YRF1-4	O13559	1382 aa		4.9	□□□□□ -1.63
BDP1	YNL039W	YBR085C-A	O43137	85 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	TRP4	P07285	380 aa	Predicted RBP	4.89	□□□□□ -1.63
BDP1	YNL039W	MET3	P08536	511 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	CAF20	P12962	161 aa	Known RBP	4.89	□□□□□ -1.63
BDP1	YNL039W	STE12	P13574	688 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	APE1	P14904	514 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	CLB1	P24868	471 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	CST26	P38226	397 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	REV7	P38927	245 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	DOT5	P40553	215 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	LCB2	P40970	561 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	PAN2	P53010	1115 aa	Predicted RBP	4.89	□□□□□ -1.63
BDP1	YNL039W	YGL036W	P53185	909 aa	Predicted RBP	4.89	□□□□□ -1.63
BDP1	YNL039W	USA1	Q03714	838 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	BUD7	Q08754	746 aa		4.89	□□□□□ -1.63
BDP1	YNL039W	PUP2	P32379	260 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	YKR073C	P36153	106 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	POP2	P39008	433 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	CCT6	P39079	546 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	ELO3	P40319	345 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	SEC24	P40482	926 aa	Known RBP	4.88	□□□□□ -1.63
BDP1	YNL039W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
BDP1	YNL039W	YJL055W	P47044	245 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	GPI8	P49018	411 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	BNI5	P53890	448 aa	Known RBP	4.88	□□□□□ -1.63
BDP1	YNL039W	OAZ1	Q02803	292 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	INA17	Q02888	182 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	YPL272C	Q08984	517 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	LAS17	Q12446	633 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	YKL033W-A	Q86ZR7	236 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	YER175W-A	Q8TGU4	54 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	REC107	P21651	314 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	RPN2	P32565	945 aa	Known RBP	4.88	□□□□□ -1.63
BDP1	YNL039W	ELF1	P36053	145 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	AGP2	P38090	596 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	ARO9	P38840	513 aa	Predicted RBP	4.88	□□□□□ -1.63
BDP1	YNL039W	LNP1	P38878	278 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	SPT20	P50875	604 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	FHN1	P53279	174 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	SPC98	P53540	846 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	DAK1	P54838	584 aa	Known RBP	4.88	□□□□□ -1.63
BDP1	YNL039W	GYL1	Q04322	720 aa		4.88	□□□□□ -1.63
BDP1	YNL039W	SIR3	P06701	978 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	YCR051W	P25631	222 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	FUB1	P25659	250 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	PHO11	P35842	467 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	PHO12	P38693	467 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	OTU2	P38747	307 aa	Known RBP	4.87	□□□□□ -1.63
BDP1	YNL039W	THI6	P41835	540 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	ZIM17	P42844	174 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	YGR079W	P53249	370 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	VPS38	Q05919	439 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	CUE5	Q08412	411 aa	Known RBP	4.87	□□□□□ -1.63
BDP1	YNL039W	GPN2	Q08726	347 aa	Predicted RBP	4.87	□□□□□ -1.63
BDP1	YNL039W	ATG29	Q12092	213 aa		4.87	□□□□□ -1.63
BDP1	YNL039W	VMA2	P16140	517 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
BDP1	YNL039W	RRP7	P25368	297 aa	Predicted RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	YIH1	P25637	258 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	RFA2	P26754	273 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	URA7	P28274	579 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	PDB1	P32473	366 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	CDC5	P32562	705 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	POL12	P38121	705 aa	Predicted RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	YNG2	P38806	282 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
BDP1	YNL039W	STR3	P53101	465 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	MRD1	Q06106	887 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	YSH1	Q06224	779 aa	Predicted RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	IRC13	Q08630	104 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	ABF1	P14164	731 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	KGD2	P19262	463 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms