RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W FTH1P38310 465 aa7.34□□□□□ -1.23
HDA1YNL021W RTS1P38903 757 aa7.34□□□□□ -1.23
HDA1YNL021W EFM4P40516 257 aa7.34□□□□□ -1.23
HDA1YNL021W TEL2P53038 688 aa7.34□□□□□ -1.23
HDA1YNL021W MUS81Q04149 632 aaPredicted RBP7.34□□□□□ -1.23
HDA1YNL021W CEX1Q12453 761 aa7.34□□□□□ -1.23
HDA1YNL021W SPE4Q12455 300 aa7.34□□□□□ -1.23
HDA1YNL021W GPM1P00950 247 aaKnown RBP7.33□□□□□ -1.24
HDA1YNL021W SIF2P38262 535 aa7.33□□□□□ -1.24
HDA1YNL021W VPS41P38959 992 aa7.33□□□□□ -1.24
HDA1YNL021W SAK1P38990 1142 aa7.33□□□□□ -1.24
HDA1YNL021W RGI2P40188 164 aa7.33□□□□□ -1.24
HDA1YNL021W MET28P40573 187 aa7.33□□□□□ -1.24
HDA1YNL021W SEC27P41811 889 aaKnown RBP7.33□□□□□ -1.24
HDA1YNL021W PFA3P42836 336 aa7.33□□□□□ -1.24
HDA1YNL021W TCB2P48231 1178 aa7.33□□□□□ -1.24
HDA1YNL021W MSC2Q03455 724 aa7.33□□□□□ -1.24
HDA1YNL021W GYL1Q04322 720 aa7.33□□□□□ -1.24
HDA1YNL021W GTB1Q04924 702 aa7.33□□□□□ -1.24
HDA1YNL021W NKP2Q06162 153 aa7.33□□□□□ -1.24
HDA1YNL021W RCN2Q12044 265 aa7.33□□□□□ -1.24
HDA1YNL021W YVC1Q12324 675 aa7.33□□□□□ -1.24
HDA1YNL021W NOP58Q12499 511 aaKnown RBP7.33□□□□□ -1.24
HDA1YNL021W CET1O13297 549 aaPredicted RBP7.33□□□□□ -1.24
HDA1YNL021W RNA1P11745 407 aaKnown RBP7.33□□□□□ -1.24
HDA1YNL021W PRP4P20053 465 aaKnown RBP7.33□□□□□ -1.24
HDA1YNL021W MGM1P32266 881 aa7.33□□□□□ -1.24
HDA1YNL021W YHL012WP38709 493 aa7.33□□□□□ -1.24
HDA1YNL021W PCL7P40186 285 aa7.33□□□□□ -1.24
HDA1YNL021W PXA1P41909 870 aa7.33□□□□□ -1.24
HDA1YNL021W FET5P43561 622 aa7.33□□□□□ -1.24
HDA1YNL021W ROK1P45818 564 aaPredicted RBP7.33□□□□□ -1.24
HDA1YNL021W BIT61P47041 543 aa7.33□□□□□ -1.24
HDA1YNL021W MTR3P48240 250 aaPredicted RBP7.33□□□□□ -1.24
HDA1YNL021W ART5P53244 586 aaKnown RBP7.33□□□□□ -1.24
HDA1YNL021W ORC4P54791 529 aa7.33□□□□□ -1.24
HDA1YNL021W UPC2Q12151 913 aa7.33□□□□□ -1.24
HDA1YNL021W LPD1P09624 499 aaKnown RBP7.32□□□□□ -1.24
HDA1YNL021W RFC1P38630 861 aaKnown RBP7.32□□□□□ -1.24
HDA1YNL021W CRG1P38892 291 aaRIP-Chip data7.32□□□□□ -1.24not detected
HDA1YNL021W MPT5P39016 859 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24 RIP-Chip
HDA1YNL021W IST3P40565 148 aaPredicted RBP7.32□□□□□ -1.24
HDA1YNL021W RPN11P43588 306 aaKnown RBP7.32□□□□□ -1.24
HDA1YNL021W VPS4P52917 437 aa7.32□□□□□ -1.24
HDA1YNL021W YGR012WP53206 393 aa7.32□□□□□ -1.24
HDA1YNL021W TOF1P53840 1238 aa7.32□□□□□ -1.24
HDA1YNL021W PRO2P54885 456 aaKnown RBP7.32□□□□□ -1.24
HDA1YNL021W ARG5,6Q01217 863 aa7.32□□□□□ -1.24
HDA1YNL021W ARX1Q03862 593 aaKnown RBP7.32□□□□□ -1.24
HDA1YNL021W YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
HDA1YNL021W NBP2Q12163 236 aa7.32□□□□□ -1.24
HDA1YNL021W RAD50P12753 1312 aa7.32□□□□□ -1.24
HDA1YNL021W STE12P13574 688 aa7.31□□□□□ -1.24
HDA1YNL021W STB5P38699 743 aa7.31□□□□□ -1.24
HDA1YNL021W YHR078WP38799 552 aa7.31□□□□□ -1.24
HDA1YNL021W SDP1P40479 209 aa7.31□□□□□ -1.24
HDA1YNL021W ZIM17P42844 174 aa7.31□□□□□ -1.24
HDA1YNL021W AAD10P47182 288 aa7.31□□□□□ -1.24
HDA1YNL021W OCA1P50946 238 aaPredicted RBP7.31□□□□□ -1.24
HDA1YNL021W SQS1P53866 767 aaKnown RBP7.31□□□□□ -1.24
HDA1YNL021W LAP3Q01532 483 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
HDA1YNL021W RPS7AP26786 190 aaKnown RBP7.31□□□□□ -1.24
HDA1YNL021W PEP3P27801 918 aa7.31□□□□□ -1.24
HDA1YNL021W STP3Q05937 343 aa7.31□□□□□ -1.24
HDA1YNL021W MMR1Q06324 491 aa7.31□□□□□ -1.24
HDA1YNL021W FMP45Q07651 309 aa7.31□□□□□ -1.24
HDA1YNL021W YPL272CQ08984 517 aa7.31□□□□□ -1.24
HDA1YNL021W RPC40P07703 335 aaKnown RBP7.3□□□□□ -1.24
HDA1YNL021W RPN2P32565 945 aaKnown RBP7.3□□□□□ -1.24
HDA1YNL021W PPQ1P32945 549 aa7.3□□□□□ -1.24
HDA1YNL021W ALY1P36117 915 aa7.3□□□□□ -1.24
HDA1YNL021W LYS4P49367 693 aaPredicted RBP7.3□□□□□ -1.24
HDA1YNL021W YNR068CP53754 272 aa7.3□□□□□ -1.24
HDA1YNL021W ATG21Q02887 496 aa7.3□□□□□ -1.24
HDA1YNL021W MUB1Q03162 620 aa7.3□□□□□ -1.24
HDA1YNL021W DPB4Q04603 196 aaKnown RBP7.3□□□□□ -1.24
HDA1YNL021W HEL2Q05580 639 aaKnown RBP7.3□□□□□ -1.24
HDA1YNL021W RIX7Q07844 837 aaKnown RBP7.3□□□□□ -1.24
HDA1YNL021W PSY3Q12318 242 aa7.3□□□□□ -1.24
HDA1YNL021W GPM3Q12326 303 aa7.3□□□□□ -1.24
HDA1YNL021W EHT1P38295 451 aa7.3□□□□□ -1.24
HDA1YNL021W FTR1P40088 404 aa7.3□□□□□ -1.24
HDA1YNL021W GLO1P50107 326 aa7.3□□□□□ -1.24
HDA1YNL021W SCW11P53189 542 aa7.3□□□□□ -1.24
HDA1YNL021W ALF1P53904 254 aa7.3□□□□□ -1.24
HDA1YNL021W WHI4Q07655 649 aaKnown RBP7.3□□□□□ -1.24
HDA1YNL021W TMA16Q08687 178 aa7.3□□□□□ -1.24
HDA1YNL021W PWP1P21304 576 aaKnown RBP7.29□□□□□ -1.24
HDA1YNL021W ERG6P25087 383 aaKnown RBP7.29□□□□□ -1.24
HDA1YNL021W HEL1P36113 551 aa7.29□□□□□ -1.24
HDA1YNL021W YHR112CP38716 378 aa7.29□□□□□ -1.24
HDA1YNL021W JHD1P40034 492 aa7.29□□□□□ -1.24
HDA1YNL021W VFA1P40080 203 aa7.29□□□□□ -1.24
HDA1YNL021W SGN1P40561 250 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
HDA1YNL021W SIZ1Q04195 904 aa7.29□□□□□ -1.24
HDA1YNL021W RPC11Q04307 110 aaPredicted RBP7.29□□□□□ -1.24
HDA1YNL021W SPE3Q12074 293 aaKnown RBP7.29□□□□□ -1.24
HDA1YNL021W NCB2Q92317 146 aa7.29□□□□□ -1.24
HDA1YNL021W SUP35P05453 685 aaKnown RBP7.28□□□□□ -1.24
HDA1YNL021W ERV1P27882 189 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms