RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C UBP12P39538 1254 aa0.69□□□□□ -2.3
NIP1YMR309C CAB2P40506 365 aa0.69□□□□□ -2.3
NIP1YMR309C QRI7P43122 407 aa0.69□□□□□ -2.3
NIP1YMR309C NPA3P47122 385 aa0.69□□□□□ -2.3
NIP1YMR309C ASK10P48361 1146 aa0.69□□□□□ -2.3
NIP1YMR309C PSP1P50896 841 aaKnown RBP0.69□□□□□ -2.3
NIP1YMR309C SHE10P53075 577 aa0.69□□□□□ -2.3
NIP1YMR309C YGR079WP53249 370 aa0.69□□□□□ -2.3
NIP1YMR309C CRZ1P53968 678 aa0.69□□□□□ -2.3
NIP1YMR309C ATG21Q02887 496 aa0.69□□□□□ -2.3
NIP1YMR309C SND1Q04007 877 aa0.69□□□□□ -2.3
NIP1YMR309C CRD1Q07560 283 aa0.69□□□□□ -2.3
NIP1YMR309C AAD4Q07747 329 aa0.69□□□□□ -2.3
NIP1YMR309C BSC6Q08280 497 aa0.69□□□□□ -2.3
NIP1YMR309C Q0010Q9ZZX9 128 aa0.69□□□□□ -2.3
NIP1YMR309C REV1P12689 985 aa0.68□□□□□ -2.3
NIP1YMR309C GUK1P15454 187 aaKnown RBP0.68□□□□□ -2.3
NIP1YMR309C PRP45P28004 379 aaPredicted RBP0.68□□□□□ -2.3
NIP1YMR309C PRO3P32263 286 aaKnown RBP0.68□□□□□ -2.3
NIP1YMR309C STV1P37296 890 aa0.68□□□□□ -2.3
NIP1YMR309C MNN2P38069 597 aa0.68□□□□□ -2.3
NIP1YMR309C YLF2P38746 405 aa0.68□□□□□ -2.3
NIP1YMR309C ASG1P40467 964 aa0.68□□□□□ -2.3
NIP1YMR309C FAF1P40546 346 aaPredicted RBP0.68□□□□□ -2.3
NIP1YMR309C POL31P46957 487 aa0.68□□□□□ -2.3
NIP1YMR309C YJR120WP47157 116 aa0.68□□□□□ -2.3
NIP1YMR309C TAN1P53072 289 aaPredicted RBP0.68□□□□□ -2.3
NIP1YMR309C YRB30P53107 440 aaPredicted RBP0.68□□□□□ -2.3
NIP1YMR309C YPR003CP53394 754 aa0.68□□□□□ -2.3
NIP1YMR309C PFA5Q03289 374 aa0.68□□□□□ -2.3
NIP1YMR309C SWF1Q04629 336 aa0.68□□□□□ -2.3
NIP1YMR309C UTP21Q06078 939 aaPredicted RBP0.68□□□□□ -2.3
NIP1YMR309C YLR352WQ06479 807 aa0.68□□□□□ -2.3
NIP1YMR309C MCP2Q06567 569 aa0.68□□□□□ -2.3
NIP1YMR309C TLG2Q08144 397 aa0.68□□□□□ -2.3
NIP1YMR309C SLX4Q12098 748 aa0.68□□□□□ -2.3
NIP1YMR309C YBR255C-AQ3E776 120 aa0.68□□□□□ -2.3
NIP1YMR309C CBP1P07252 654 aa0.68□□□□□ -2.3
NIP1YMR309C ADH4P10127 382 aa0.68□□□□□ -2.3
NIP1YMR309C SEC1P30619 724 aaKnown RBP0.68□□□□□ -2.3
NIP1YMR309C SWD1P39706 426 aa0.68□□□□□ -2.3
NIP1YMR309C IMA5P40884 581 aa0.68□□□□□ -2.3
NIP1YMR309C CUL3P53202 744 aa0.68□□□□□ -2.3
NIP1YMR309C COG6P53959 839 aa0.68□□□□□ -2.3
NIP1YMR309C FRE3Q08905 711 aa0.68□□□□□ -2.3
NIP1YMR309C ICL2Q12031 575 aa0.68□□□□□ -2.3
NIP1YMR309C PDA1P16387 420 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C RPB8P20436 146 aa0.67□□□□□ -2.3
NIP1YMR309C CPR3P25719 182 aa0.67□□□□□ -2.3
NIP1YMR309C LHS1P36016 881 aa0.67□□□□□ -2.3
NIP1YMR309C PCA1P38360 1216 aa0.67□□□□□ -2.3
NIP1YMR309C TPA1P40032 644 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C YJL070CP40361 888 aa0.67□□□□□ -2.3
NIP1YMR309C UBP7P40453 1071 aa0.67□□□□□ -2.3
NIP1YMR309C YNL181WP53878 407 aa0.67□□□□□ -2.3
NIP1YMR309C ADE16P54113 591 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C MTG1Q03151 367 aaPredicted RBP0.67□□□□□ -2.3
NIP1YMR309C ADD37Q03233 198 aa0.67□□□□□ -2.3
NIP1YMR309C AIM6Q07716 390 aa0.67□□□□□ -2.3
NIP1YMR309C ARP7Q12406 477 aa0.67□□□□□ -2.3
NIP1YMR309C YBR298C-AQ8TGK4 73 aa0.67□□□□□ -2.3
NIP1YMR309C YER145C-AA0A023PYF4 145 aa0.67□□□□□ -2.3
NIP1YMR309C YML002WP0CF17 737 aa0.67□□□□□ -2.3
NIP1YMR309C PET122P10355 254 aa0.67□□□□□ -2.3
NIP1YMR309C POL3P15436 1097 aa0.67□□□□□ -2.3
NIP1YMR309C SAN1P22470 610 aa0.67□□□□□ -2.3
NIP1YMR309C RIT1P23796 513 aa0.67□□□□□ -2.3
NIP1YMR309C MGR1P25573 417 aa0.67□□□□□ -2.3
NIP1YMR309C RAD24P32641 659 aa0.67□□□□□ -2.3
NIP1YMR309C PDR3P33200 976 aa0.67□□□□□ -2.3
NIP1YMR309C NUP120P35729 1037 aa0.67□□□□□ -2.3
NIP1YMR309C HES1P35843 434 aa0.67□□□□□ -2.3
NIP1YMR309C EFM2P38347 419 aa0.67□□□□□ -2.3
NIP1YMR309C RRP3P38712 501 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C VPS27P40343 622 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C YIL161WP40449 235 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C DJP1P40564 432 aa0.67□□□□□ -2.3
NIP1YMR309C MKT1P40850 830 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C IML2P47031 731 aa0.67□□□□□ -2.3
NIP1YMR309C MAD3P47074 515 aa0.67□□□□□ -2.3
NIP1YMR309C CNM67P53865 581 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C EAF7P53911 425 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C ESBP6P53918 673 aa0.67□□□□□ -2.3
NIP1YMR309C CAC2Q04199 468 aa0.67□□□□□ -2.3
NIP1YMR309C PIG1Q06216 648 aa0.67□□□□□ -2.3
NIP1YMR309C APL5Q08951 932 aaKnown RBP0.67□□□□□ -2.3
NIP1YMR309C GPA1P08539 472 aa0.66□□□□□ -2.3
NIP1YMR309C MIS1P09440 975 aaKnown RBP0.66□□□□□ -2.3
NIP1YMR309C PMS1P14242 873 aa0.66□□□□□ -2.3
NIP1YMR309C HNM1P19807 563 aa0.66□□□□□ -2.3
NIP1YMR309C LSB5P25369 354 aa0.66□□□□□ -2.3
NIP1YMR309C RFA2P26754 273 aaKnown RBP0.66□□□□□ -2.3
NIP1YMR309C URK1P27515 501 aa0.66□□□□□ -2.3
NIP1YMR309C GRX4P32642 244 aa0.66□□□□□ -2.3
NIP1YMR309C MRPL4P36517 319 aa0.66□□□□□ -2.3
NIP1YMR309C ADE17P38009 592 aaKnown RBP0.66□□□□□ -2.3
NIP1YMR309C RRT2P38332 387 aa0.66□□□□□ -2.3
NIP1YMR309C VPS41P38959 992 aa0.66□□□□□ -2.3
NIP1YMR309C MRX1P40050 688 aa0.66□□□□□ -2.3
NIP1YMR309C ATG27P46989 271 aa0.66□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms