RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	HCS1	P34243	683 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	EAF5	P39995	279 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YEN1	P40028	759 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YJL068C	P40363	299 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YJL213W	P40896	331 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	GZF3	P42944	551 aa	Known RBP	0.6	□□□□□ -2.31
RCO1	YMR075W	IDS2	P46958	469 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	MNN11	P46985	422 aa	Known RBP	0.6	□□□□□ -2.31
RCO1	YMR075W	YJR142W	P47173	342 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YDL183C	P48569	320 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YGL036W	P53185	909 aa	Predicted RBP	0.6	□□□□□ -2.31
RCO1	YMR075W	FPR4	Q06205	392 aa	Predicted RBP	0.6	□□□□□ -2.31
RCO1	YMR075W	CWC2	Q12046	339 aa	Predicted RBP	0.6	□□□□□ -2.31
RCO1	YMR075W	HFI1	Q12060	488 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	BSC1	Q12140	328 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YGR161W-C	Q3E744	92 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	ATP12	P22135	325 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	ARG1	P22768	420 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	SIP1	P32578	815 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YKL097C	P34245	136 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	RRP14	P36080	434 aa	Known RBP	0.6	□□□□□ -2.31
RCO1	YMR075W	PMT3	P47190	753 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	YDL186W	P48568	277 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	HOS1	Q12214	470 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	RMP1	Q12530	201 aa		0.6	□□□□□ -2.31
RCO1	YMR075W	URA3	P03962	267 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	CTT1	P06115	562 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	AMD2	P22580	549 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	RPS7A	P26786	190 aa	Known RBP	0.59	□□□□□ -2.32
RCO1	YMR075W	MF(ALPHA)2	P32435	120 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	DID4	P36108	232 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	VBA2	P38358	474 aa	Known RBP	0.59	□□□□□ -2.32
RCO1	YMR075W	GPP1	P41277	250 aa	Known RBP	0.59	□□□□□ -2.32
RCO1	YMR075W	SPC105	P53148	917 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	YNL034W	P53963	612 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	CRF1	Q04930	467 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	ECM38	Q05902	660 aa	Predicted RBP	0.59	□□□□□ -2.32
RCO1	YMR075W	MHR1	Q06630	226 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	YOR378W	Q08902	515 aa		0.59	□□□□□ -2.32
RCO1	YMR075W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.32	not detected
RCO1	YMR075W	YBR056W-A	I2HB52	66 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	PTC6	P25646	442 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	PRE2	P30656	287 aa	Known RBP	0.58	□□□□□ -2.32
RCO1	YMR075W	MID2	P36027	376 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	ARO9	P38840	513 aa	Predicted RBP	0.58	□□□□□ -2.32
RCO1	YMR075W	MNT2	P53059	558 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	GPG1	P53130	126 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	YNR029C	P53729	429 aa	Known RBP	0.58	□□□□□ -2.32
RCO1	YMR075W	PIG1	Q06216	648 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	MCP2	Q06567	569 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	TMC1	Q08422	150 aa	Predicted RBP	0.58	□□□□□ -2.32
RCO1	YMR075W	VPS5	Q92331	675 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	KAR1	P11927	433 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	CWH43	P25618	953 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	VPS41	P38959	992 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	VFA1	P40080	203 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	PEF1	P53238	335 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	HOL1	P53389	586 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	SMA1	Q02651	245 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	SKY1	Q03656	742 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	UTP14	Q04500	899 aa	Known RBP	0.58	□□□□□ -2.32
RCO1	YMR075W	TRE2	Q08693	809 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	LEA1	Q08963	238 aa	Predicted RBP	0.58	□□□□□ -2.32
RCO1	YMR075W	NUR1	Q12066	484 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	APM4	Q99186	491 aa		0.58	□□□□□ -2.32
RCO1	YMR075W	SES1	P07284	462 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	SUI3	P09064	285 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	KGD2	P19262	463 aa	Predicted RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	COX11	P19516	300 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	PET309	P32522	965 aa	Predicted RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	SPR1	P32603	445 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	MIC60	P36112	540 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	RPF2	P36160	344 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	SRP68	P38687	599 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	FUN12	P39730	1002 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	TIF4631	P39935	952 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	IRC5	P43610	853 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	UBX6	P47049	396 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	COS12	P53053	380 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	SLD3	P53135	668 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	YNR071C	P53757	342 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	YDL242W	Q07746	117 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	RTK1	Q12100	620 aa	Predicted RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	DBP10	Q12389	995 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	SUP35	P05453	685 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	GLN3	P18494	730 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	TFC4	P33339	1025 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	STL1	P39932	569 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	ARB1	P40024	610 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	SCS2	P40075	244 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	GPP2	P40106	250 aa	Known RBP	0.57	□□□□□ -2.32
RCO1	YMR075W	YJR120W	P47157	116 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	YGR079W	P53249	370 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	YLR152C	P54072	576 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	YDR109C	Q04585	715 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	STP3	Q05937	343 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	PSF3	Q12146	194 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	Q0010	Q9ZZX9	128 aa		0.57	□□□□□ -2.32
RCO1	YMR075W	FAB1	P34756	2278 aa		0.56	□□□□□ -2.32
RCO1	YMR075W	COX1	P00401	534 aa		0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms