RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C RIT1P23796 513 aa3.33□□□□□ -1.88
UBX4YMR067C URK1P27515 501 aa3.33□□□□□ -1.88
UBX4YMR067C RTT107P38850 1070 aa3.33□□□□□ -1.88
UBX4YMR067C MET30P39014 640 aa3.33□□□□□ -1.88
UBX4YMR067C BUD16P39988 312 aa3.33□□□□□ -1.88
UBX4YMR067C YIL169CP40442 995 aa3.33□□□□□ -1.88
UBX4YMR067C SKP2P42843 763 aa3.33□□□□□ -1.88
UBX4YMR067C MSY1P48527 492 aa3.33□□□□□ -1.88
UBX4YMR067C TAN1P53072 289 aaPredicted RBP3.33□□□□□ -1.88
UBX4YMR067C TEP1P53916 434 aa3.33□□□□□ -1.88
UBX4YMR067C MTG1Q03151 367 aaPredicted RBP3.33□□□□□ -1.88
UBX4YMR067C YDR109CQ04585 715 aa3.33□□□□□ -1.88
UBX4YMR067C ECI1Q05871 280 aa3.33□□□□□ -1.88
UBX4YMR067C YKL133CP36066 463 aa3.32□□□□□ -1.88
UBX4YMR067C ASG1P40467 964 aa3.32□□□□□ -1.88
UBX4YMR067C CPR6P53691 371 aaKnown RBP3.32□□□□□ -1.88
UBX4YMR067C BET4Q00618 327 aa3.32□□□□□ -1.88
UBX4YMR067C PIF1P07271 859 aa3.31□□□□□ -1.88
UBX4YMR067C MIS1P09440 975 aaKnown RBP3.31□□□□□ -1.88
UBX4YMR067C POL3P15436 1097 aa3.31□□□□□ -1.88
UBX4YMR067C LRE1P25579 583 aaKnown RBP3.31□□□□□ -1.88
UBX4YMR067C MNN2P38069 597 aa3.31□□□□□ -1.88
UBX4YMR067C APM3P38153 483 aa3.31□□□□□ -1.88
UBX4YMR067C FSH1P38777 243 aaKnown RBP3.31□□□□□ -1.88
UBX4YMR067C TAM41P53230 385 aa3.31□□□□□ -1.88
UBX4YMR067C SND1Q04007 877 aa3.31□□□□□ -1.88
UBX4YMR067C MLC2Q06580 163 aa3.31□□□□□ -1.88
UBX4YMR067C BRE1Q07457 700 aaKnown RBP3.31□□□□□ -1.88
UBX4YMR067C GPN2Q08726 347 aaPredicted RBP3.31□□□□□ -1.88
UBX4YMR067C GPA1P08539 472 aa3.3□□□□□ -1.88
UBX4YMR067C SUI3P09064 285 aaKnown RBP3.3□□□□□ -1.88
UBX4YMR067C PCT1P13259 424 aa3.3□□□□□ -1.88
UBX4YMR067C GCD7P32502 381 aaPredicted RBP3.3□□□□□ -1.88
UBX4YMR067C QRI7P43122 407 aa3.3□□□□□ -1.88
UBX4YMR067C PEX8P53248 589 aa3.3□□□□□ -1.88
UBX4YMR067C ARP9Q05123 467 aa3.3□□□□□ -1.88
UBX4YMR067C POS5Q06892 414 aa3.3□□□□□ -1.88
UBX4YMR067C SUL2Q12325 893 aa3.3□□□□□ -1.88
UBX4YMR067C ADE3P07245 946 aaKnown RBP3.29□□□□□ -1.88
UBX4YMR067C RPL42AP0CX27 106 aaKnown RBP3.29□□□□□ -1.88
UBX4YMR067C RPL42BP0CX28 106 aaKnown RBP3.29□□□□□ -1.88
UBX4YMR067C ARP2P32381 391 aaKnown RBP3.29□□□□□ -1.88
UBX4YMR067C SAD1P43589 448 aa3.29□□□□□ -1.88
UBX4YMR067C YGL036WP53185 909 aaPredicted RBP3.29□□□□□ -1.88
UBX4YMR067C DCP2P53550 970 aaKnown RBP3.29□□□□□ -1.88
UBX4YMR067C YLR455WQ06188 304 aa3.29□□□□□ -1.88
UBX4YMR067C MPD2Q99316 277 aa3.29□□□□□ -1.88
UBX4YMR067C YCR006CP25350 157 aa3.28□□□□□ -1.88
UBX4YMR067C VRG4P40107 337 aa3.28□□□□□ -1.88
UBX4YMR067C YNL181WP53878 407 aa3.28□□□□□ -1.88
UBX4YMR067C ADE16P54113 591 aaKnown RBP3.28□□□□□ -1.88
UBX4YMR067C MET14Q02196 202 aa3.28□□□□□ -1.88
UBX4YMR067C IZH1Q03419 316 aa3.28□□□□□ -1.88
UBX4YMR067C FMP42Q04991 504 aa3.28□□□□□ -1.88
UBX4YMR067C NRT1Q08485 598 aa3.28□□□□□ -1.88
UBX4YMR067C YLR049CQ12110 428 aa3.28□□□□□ -1.88
UBX4YMR067C PHO2P07269 559 aa3.27□□□□□ -1.89
UBX4YMR067C SPO16P17122 198 aa3.27□□□□□ -1.89
UBX4YMR067C SWI4P25302 1093 aaKnown RBP3.27□□□□□ -1.89
UBX4YMR067C PPZ1P26570 692 aa3.27□□□□□ -1.89
UBX4YMR067C EFM2P38347 419 aa3.27□□□□□ -1.89
UBX4YMR067C BZZ1P38822 633 aa3.27□□□□□ -1.89
UBX4YMR067C VPS27P40343 622 aaKnown RBP3.27□□□□□ -1.89
UBX4YMR067C ZAP1P47043 880 aa3.27□□□□□ -1.89
UBX4YMR067C ECM16Q04217 1267 aaKnown RBP3.27□□□□□ -1.89
UBX4YMR067C FRE3Q08905 711 aa3.27□□□□□ -1.89
UBX4YMR067C YLR112WQ12130 139 aa3.27□□□□□ -1.89
UBX4YMR067C YML003WP0CF16 290 aa3.26□□□□□ -1.89
UBX4YMR067C YSP3P25036 478 aa3.26□□□□□ -1.89
UBX4YMR067C RFA2P26754 273 aaKnown RBP3.26□□□□□ -1.89
UBX4YMR067C YND1P40009 630 aa3.26□□□□□ -1.89
UBX4YMR067C YIL161WP40449 235 aaKnown RBP3.26□□□□□ -1.89
UBX4YMR067C FAF1P40546 346 aaPredicted RBP3.26□□□□□ -1.89
UBX4YMR067C IML2P47031 731 aa3.26□□□□□ -1.89
UBX4YMR067C MOT3P54785 490 aaKnown RBP3.26□□□□□ -1.89
UBX4YMR067C DIG1Q03063 452 aaKnown RBP3.26□□□□□ -1.89
UBX4YMR067C TRS130Q03660 1102 aa3.26□□□□□ -1.89
UBX4YMR067C YMR254CQ04838 102 aa3.26□□□□□ -1.89
UBX4YMR067C YMR317WQ04893 1140 aa3.26□□□□□ -1.89
UBX4YMR067C YTH1Q06102 208 aaPredicted RBP3.26□□□□□ -1.89
UBX4YMR067C VAM6Q07468 1049 aa3.26□□□□□ -1.89
UBX4YMR067C SWT1Q12104 458 aa3.26□□□□□ -1.89
UBX4YMR067C TAH18Q12181 623 aa3.26□□□□□ -1.89
UBX4YMR067C MSS18P08593 268 aa3.25□□□□□ -1.89
UBX4YMR067C STE50P25344 346 aa3.25□□□□□ -1.89
UBX4YMR067C MSH1P25846 959 aa3.25□□□□□ -1.89
UBX4YMR067C PTP2P29461 750 aa3.25□□□□□ -1.89
UBX4YMR067C NUP120P35729 1037 aa3.25□□□□□ -1.89
UBX4YMR067C SPC72P39723 622 aa3.25□□□□□ -1.89
UBX4YMR067C ERR3P42222 437 aa3.25□□□□□ -1.89
UBX4YMR067C RPN11P43588 306 aaKnown RBP3.25□□□□□ -1.89
UBX4YMR067C PSP1P50896 841 aaKnown RBP3.25□□□□□ -1.89
UBX4YMR067C YGL260WP53056 76 aa3.25□□□□□ -1.89
UBX4YMR067C PAP2P53632 584 aaKnown RBP3.25□□□□□ -1.89
UBX4YMR067C UTP21Q06078 939 aaPredicted RBP3.25□□□□□ -1.89
UBX4YMR067C MCP2Q06567 569 aa3.25□□□□□ -1.89
UBX4YMR067C SWA2Q06677 668 aa3.25□□□□□ -1.89
UBX4YMR067C APL5Q08951 932 aaKnown RBP3.25□□□□□ -1.89
UBX4YMR067C ATP4P05626 244 aa3.24□□□□□ -1.89
UBX4YMR067C MRX1P40050 688 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 279.6 ms