RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W MSY1P48527 492 aa3.86□□□□□ -1.79
VPS38YLR360W YNL144CP53907 740 aa3.86□□□□□ -1.79
VPS38YLR360W ADE16P54113 591 aaKnown RBP3.86□□□□□ -1.79
VPS38YLR360W ATG23Q06671 453 aa3.86□□□□□ -1.79
VPS38YLR360W CNA1P23287 553 aa3.85□□□□□ -1.79
VPS38YLR360W YCR006CP25350 157 aa3.85□□□□□ -1.79
VPS38YLR360W YIL161WP40449 235 aaKnown RBP3.85□□□□□ -1.79
VPS38YLR360W MRPL13Q02204 264 aa3.85□□□□□ -1.79
VPS38YLR360W BLS1Q06071 122 aa3.85□□□□□ -1.79
VPS38YLR360W SWT1Q12104 458 aa3.85□□□□□ -1.79
VPS38YLR360W BAG7Q12128 409 aa3.85□□□□□ -1.79
VPS38YLR360W COX17Q12287 69 aa3.85□□□□□ -1.79
VPS38YLR360W YML003WP0CF16 290 aa3.84□□□□□ -1.79
VPS38YLR360W LRE1P25579 583 aaKnown RBP3.84□□□□□ -1.79
VPS38YLR360W YIR016WP40572 265 aa3.84□□□□□ -1.79
VPS38YLR360W YPT11P48559 417 aa3.84□□□□□ -1.79
VPS38YLR360W IOC4Q04213 475 aa3.84□□□□□ -1.79
VPS38YLR360W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
VPS38YLR360W YCL049CP25577 312 aa3.83□□□□□ -1.8
VPS38YLR360W DBF20P32328 564 aa3.83□□□□□ -1.8
VPS38YLR360W OCT1P35999 772 aa3.83□□□□□ -1.8
VPS38YLR360W NPR3P38742 1146 aa3.83□□□□□ -1.8
VPS38YLR360W ASG1P40467 964 aa3.83□□□□□ -1.8
VPS38YLR360W CDC1P40986 491 aa3.83□□□□□ -1.8
VPS38YLR360W ARC35P53731 342 aaKnown RBP3.83□□□□□ -1.8
VPS38YLR360W RPL15BP54780 204 aaPredicted RBP3.83□□□□□ -1.8
VPS38YLR360W YPL068CQ02749 293 aa3.83□□□□□ -1.8
VPS38YLR360W CIA1Q05583 330 aa3.83□□□□□ -1.8
VPS38YLR360W SWA2Q06677 668 aa3.83□□□□□ -1.8
VPS38YLR360W VAM6Q07468 1049 aa3.83□□□□□ -1.8
VPS38YLR360W ATX2Q12067 313 aa3.83□□□□□ -1.8
VPS38YLR360W TPK1P06244 397 aa3.82□□□□□ -1.8
VPS38YLR360W MRP2P10663 115 aaPredicted RBP3.82□□□□□ -1.8
VPS38YLR360W SPO16P17122 198 aa3.82□□□□□ -1.8
VPS38YLR360W AIM17P23180 465 aaKnown RBP3.82□□□□□ -1.8
VPS38YLR360W YSP3P25036 478 aa3.82□□□□□ -1.8
VPS38YLR360W PTH2P34222 208 aa3.82□□□□□ -1.8
VPS38YLR360W TPM2P40414 161 aa3.82□□□□□ -1.8
VPS38YLR360W MDV1P47025 714 aa3.82□□□□□ -1.8
VPS38YLR360W COG1P53079 417 aa3.82□□□□□ -1.8
VPS38YLR360W DCP2P53550 970 aaKnown RBP3.82□□□□□ -1.8
VPS38YLR360W VTC3Q02725 835 aa3.82□□□□□ -1.8
VPS38YLR360W MCH4Q08268 501 aa3.82□□□□□ -1.8
VPS38YLR360W CIR2Q08822 631 aa3.82□□□□□ -1.8
VPS38YLR360W YLR049CQ12110 428 aa3.82□□□□□ -1.8
VPS38YLR360W PCT1P13259 424 aa3.81□□□□□ -1.8
VPS38YLR360W RAD16P31244 790 aa3.81□□□□□ -1.8
VPS38YLR360W EXO84P38261 753 aa3.81□□□□□ -1.8
VPS38YLR360W TOM71P38825 639 aaKnown RBP3.81□□□□□ -1.8
VPS38YLR360W SMK1P41808 388 aa3.81□□□□□ -1.8
VPS38YLR360W IRC8P47046 822 aa3.81□□□□□ -1.8
VPS38YLR360W VPS25P47142 202 aa3.81□□□□□ -1.8
VPS38YLR360W UBP8P50102 471 aa3.81□□□□□ -1.8
VPS38YLR360W YGL036WP53185 909 aaPredicted RBP3.81□□□□□ -1.8
VPS38YLR360W TMA16Q08687 178 aa3.81□□□□□ -1.8
VPS38YLR360W PCD1Q12524 340 aa3.81□□□□□ -1.8
VPS38YLR360W YER145C-AA0A023PYF4 145 aa3.8□□□□□ -1.8
VPS38YLR360W PFK2P16862 959 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
VPS38YLR360W YCP4P25349 247 aaKnown RBP3.8□□□□□ -1.8
VPS38YLR360W ADE17P38009 592 aaKnown RBP3.8□□□□□ -1.8
VPS38YLR360W UBP13P38187 747 aa3.8□□□□□ -1.8
VPS38YLR360W IFA38P38286 347 aa3.8□□□□□ -1.8
VPS38YLR360W GND1P38720 489 aaKnown RBP3.8□□□□□ -1.8
VPS38YLR360W PHM8P40025 321 aa3.8□□□□□ -1.8
VPS38YLR360W TPA1P40032 644 aaKnown RBP3.8□□□□□ -1.8
VPS38YLR360W LYS20P48570 428 aaKnown RBP3.8□□□□□ -1.8
VPS38YLR360W PIG1Q06216 648 aa3.8□□□□□ -1.8
VPS38YLR360W CRN1Q06440 651 aa3.8□□□□□ -1.8
VPS38YLR360W SNA4Q07549 140 aa3.8□□□□□ -1.8
VPS38YLR360W FRE3Q08905 711 aa3.8□□□□□ -1.8
VPS38YLR360W TY2A-LR1P0C2J4 438 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-FP0CX61 438 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-GR2P0CX62 438 aa3.79□□□□□ -1.8
VPS38YLR360W UBC1P21734 215 aaKnown RBP3.79□□□□□ -1.8
VPS38YLR360W TY2A-CP25383 438 aa3.79□□□□□ -1.8
VPS38YLR360W LHS1P36016 881 aa3.79□□□□□ -1.8
VPS38YLR360W ASE1P50275 885 aa3.79□□□□□ -1.8
VPS38YLR360W BOP3P53958 396 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-DR2Q03483 438 aa3.79□□□□□ -1.8
VPS38YLR360W CSR1Q06705 408 aaKnown RBP3.79□□□□□ -1.8
VPS38YLR360W UBX3Q12229 455 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-BQ12260 438 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-OR2Q12293 438 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-DR1Q12392 438 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-OR1Q12439 438 aa3.79□□□□□ -1.8
VPS38YLR360W TY2A-DR3Q99303 438 aa3.79□□□□□ -1.8
VPS38YLR360W GPA1P08539 472 aa3.78□□□□□ -1.8
VPS38YLR360W MTF2P10849 440 aa3.78□□□□□ -1.8
VPS38YLR360W MRS6P32864 603 aaKnown RBP3.78□□□□□ -1.8
VPS38YLR360W PXL1P36166 706 aa3.78□□□□□ -1.8
VPS38YLR360W GEX2P36173 615 aa3.78□□□□□ -1.8
VPS38YLR360W VPS41P38959 992 aa3.78□□□□□ -1.8
VPS38YLR360W CSL4P53859 292 aaPredicted RBP3.78□□□□□ -1.8
VPS38YLR360W PFA5Q03289 374 aa3.78□□□□□ -1.8
VPS38YLR360W GSH2Q08220 491 aa3.78□□□□□ -1.8
VPS38YLR360W ERG27Q12452 347 aaKnown RBP3.78□□□□□ -1.8
VPS38YLR360W ATO2P32907 282 aa3.77□□□□□ -1.81
VPS38YLR360W SOF1P33750 489 aaKnown RBP3.77□□□□□ -1.81
VPS38YLR360W UME6P39001 836 aa3.77□□□□□ -1.81
VPS38YLR360W MRX1P40050 688 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms