RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD8	YLR353W	TMA108	P40462	946 aa		5	□□□□□ -1.61
BUD8	YLR353W	POL31	P46957	487 aa		5	□□□□□ -1.61
BUD8	YLR353W	CTF18	P49956	741 aa		5	□□□□□ -1.61
BUD8	YLR353W	YAT1	P80235	687 aa		5	□□□□□ -1.61
BUD8	YLR353W	IRC4	Q03036	179 aa		5	□□□□□ -1.61
BUD8	YLR353W	ARA2	Q04212	335 aa		5	□□□□□ -1.61
BUD8	YLR353W	VID22	Q05934	901 aa		5	□□□□□ -1.61
BUD8	YLR353W	RAD50	P12753	1312 aa		5	□□□□□ -1.61
BUD8	YLR353W	SNF1	P06782	633 aa	Known RBP	5	□□□□□ -1.61
BUD8	YLR353W	ADE3	P07245	946 aa	Known RBP	5	□□□□□ -1.61
BUD8	YLR353W	PRP28	P23394	588 aa		5	□□□□□ -1.61
BUD8	YLR353W	SWI4	P25302	1093 aa	Known RBP	5	□□□□□ -1.61
BUD8	YLR353W	MSP1	P28737	362 aa		5	□□□□□ -1.61
BUD8	YLR353W	DCG1	P32460	244 aa		5	□□□□□ -1.61
BUD8	YLR353W	MRPL36	P36531	177 aa		5	□□□□□ -1.61
BUD8	YLR353W	EHT1	P38295	451 aa		5	□□□□□ -1.61
BUD8	YLR353W	CSI1	Q04368	295 aa		5	□□□□□ -1.61
BUD8	YLR353W	CSR1	Q06705	408 aa	Known RBP	5	□□□□□ -1.61
BUD8	YLR353W	BMS1	Q08965	1183 aa	Known RBP	5	□□□□□ -1.61
BUD8	YLR353W	TUB2	P02557	457 aa	Known RBP	4.99	□□□□□ -1.61
BUD8	YLR353W	BIK1	P11709	440 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	PRP6	P19735	899 aa	Predicted RBP	4.99	□□□□□ -1.61
BUD8	YLR353W	LCB1	P25045	558 aa	Known RBP	4.99	□□□□□ -1.61
BUD8	YLR353W	MVD1	P32377	396 aa	Known RBP	4.99	□□□□□ -1.61
BUD8	YLR353W	TOD6	P34219	525 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	IFA38	P38286	347 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	DJP1	P40564	432 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	BUL1	P48524	976 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	RFX1	P48743	811 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	MNN10	P50108	393 aa	Known RBP	4.99	□□□□□ -1.61
BUD8	YLR353W	MDM1	Q01846	1127 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	TRS31	Q03337	283 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	ADY4	Q05955	493 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	NKP2	Q06162	153 aa		4.99	□□□□□ -1.61
BUD8	YLR353W	CHS5	Q12114	671 aa	Known RBP	4.99	□□□□□ -1.61
BUD8	YLR353W	MEX67	Q99257	599 aa	Known RBP	4.99	□□□□□ -1.61
BUD8	YLR353W	YCR015C	P25616	317 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	MGM1	P32266	881 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	FSH1	P38777	243 aa	Known RBP	4.98	□□□□□ -1.61
BUD8	YLR353W	TOM71	P38825	639 aa	Known RBP	4.98	□□□□□ -1.61
BUD8	YLR353W	CHS7	P38843	316 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	AXL2	P38928	823 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	VFA1	P40080	203 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	SDS3	P40505	327 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	CAB2	P40506	365 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	UBC11	P52492	156 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	VPS64	Q03944	604 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	LAA1	P39526	2014 aa		4.98	□□□□□ -1.61
BUD8	YLR353W	DUR1,2	P32528	1835 aa	Known RBP	4.98	□□□□□ -1.61
BUD8	YLR353W	SEC12	P11655	471 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	HOM2	P13663	365 aa	Known RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	VPS33	P20795	691 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	MFT1	P33441	392 aa	Known RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	MPE1	P35728	441 aa	Known RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	RFC1	P38630	861 aa	Known RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	BCD1	P38772	366 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	TMN3	P40071	706 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	LRO1	P40345	661 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	SAP4	P53036	818 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	TRM8	Q12009	286 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	GUK1	P15454	187 aa	Known RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	MSS1	P32559	526 aa	Predicted RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	SET3	P36124	751 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	LEU5	P38702	357 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	MOB1	P40484	314 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	BST1	P43571	1029 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	ESF2	P53743	316 aa	Known RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	CSL4	P53859	292 aa	Predicted RBP	4.97	□□□□□ -1.61
BUD8	YLR353W	ARR3	Q06598	404 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	MED1	Q12321	566 aa		4.97	□□□□□ -1.61
BUD8	YLR353W	YLR358C	O13565	187 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	SIR3	P06701	978 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	CDC16	P09798	840 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	POX1	P13711	748 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	ARP2	P32381	391 aa	Known RBP	4.96	□□□□□ -1.62
BUD8	YLR353W	GCD7	P32502	381 aa	Predicted RBP	4.96	□□□□□ -1.62
BUD8	YLR353W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
BUD8	YLR353W	UME6	P39001	836 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	YJL193W	P39542	402 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	YER010C	P40011	234 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	PNG1	Q02890	363 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	MMR1	Q06324	491 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	THI3	Q07471	609 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	ZRT2	Q12436	422 aa		4.96	□□□□□ -1.62
BUD8	YLR353W	YBL028C	P38202	106 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	REV7	P38927	245 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	YEL025C	P39991	1188 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	DPH1	P40487	425 aa	Known RBP	4.95	□□□□□ -1.62
BUD8	YLR353W	YJL163C	P46996	555 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	ZAP1	P47043	880 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	MPS3	P47069	682 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	PAN2	P53010	1115 aa	Predicted RBP	4.95	□□□□□ -1.62
BUD8	YLR353W	YGR054W	P53235	642 aa	Known RBP	4.95	□□□□□ -1.62
BUD8	YLR353W	ATG21	Q02887	496 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	IRC13	Q08630	104 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	RRD2	Q12461	358 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	YKL033W-A	Q86ZR7	236 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	RAD16	P31244	790 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	NTH1	P32356	751 aa		4.95	□□□□□ -1.62
BUD8	YLR353W	CBF2	P32504	956 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms