RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C ARP2P32381 391 aaKnown RBP3.79□□□□□ -1.8
ATG38YLR211C APM3P38153 483 aa3.79□□□□□ -1.8
ATG38YLR211C FUN12P39730 1002 aaKnown RBP3.79□□□□□ -1.8
ATG38YLR211C STP3Q05937 343 aa3.79□□□□□ -1.8
ATG38YLR211C IWR1Q07532 353 aaPredicted RBP3.79□□□□□ -1.8
ATG38YLR211C MCH4Q08268 501 aa3.79□□□□□ -1.8
ATG38YLR211C FRE3Q08905 711 aa3.79□□□□□ -1.8
ATG38YLR211C GPA1P08539 472 aa3.78□□□□□ -1.8
ATG38YLR211C MSS18P08593 268 aa3.78□□□□□ -1.8
ATG38YLR211C YML003WP0CF16 290 aa3.78□□□□□ -1.8
ATG38YLR211C GEX2P36173 615 aa3.78□□□□□ -1.8
ATG38YLR211C YBR138CP38277 524 aa3.78□□□□□ -1.8
ATG38YLR211C MET30P39014 640 aa3.78□□□□□ -1.8
ATG38YLR211C CPR6P53691 371 aaKnown RBP3.78□□□□□ -1.8
ATG38YLR211C ADE16P54113 591 aaKnown RBP3.78□□□□□ -1.8
ATG38YLR211C MET14Q02196 202 aa3.78□□□□□ -1.8
ATG38YLR211C NEW1Q08972 1196 aaKnown RBP3.78□□□□□ -1.8
ATG38YLR211C TMA7Q3E764 64 aaKnown RBP3.78□□□□□ -1.8
ATG38YLR211C GAL1P04385 528 aa3.77□□□□□ -1.81
ATG38YLR211C PET122P10355 254 aa3.77□□□□□ -1.81
ATG38YLR211C RFA2P26754 273 aaKnown RBP3.77□□□□□ -1.81
ATG38YLR211C SWC3P31376 625 aa3.77□□□□□ -1.81
ATG38YLR211C PHM8P40025 321 aa3.77□□□□□ -1.81
ATG38YLR211C UBX6P47049 396 aa3.77□□□□□ -1.81
ATG38YLR211C IMA1P53051 589 aa3.77□□□□□ -1.81
ATG38YLR211C ATG21Q02887 496 aa3.77□□□□□ -1.81
ATG38YLR211C DIG1Q03063 452 aaKnown RBP3.77□□□□□ -1.81
ATG38YLR211C CAC2Q04199 468 aa3.77□□□□□ -1.81
ATG38YLR211C PIF1P07271 859 aa3.76□□□□□ -1.81
ATG38YLR211C YCR006CP25350 157 aa3.76□□□□□ -1.81
ATG38YLR211C YAT2P40017 923 aa3.76□□□□□ -1.81
ATG38YLR211C YIL169CP40442 995 aa3.76□□□□□ -1.81
ATG38YLR211C HIM1Q06674 414 aa3.76□□□□□ -1.81
ATG38YLR211C MNN2P38069 597 aa3.75□□□□□ -1.81
ATG38YLR211C EXO84P38261 753 aa3.75□□□□□ -1.81
ATG38YLR211C LEU5P38702 357 aa3.75□□□□□ -1.81
ATG38YLR211C YND1P40009 630 aa3.75□□□□□ -1.81
ATG38YLR211C HIS6P40545 261 aa3.75□□□□□ -1.81
ATG38YLR211C MTG1Q03151 367 aaPredicted RBP3.75□□□□□ -1.81
ATG38YLR211C IZH1Q03419 316 aa3.75□□□□□ -1.81
ATG38YLR211C ARP9Q05123 467 aa3.75□□□□□ -1.81
ATG38YLR211C NRT1Q08485 598 aa3.75□□□□□ -1.81
ATG38YLR211C BAG7Q12128 409 aa3.75□□□□□ -1.81
ATG38YLR211C YKL133CP36066 463 aa3.74□□□□□ -1.81
ATG38YLR211C PCL6P40038 420 aa3.74□□□□□ -1.81
ATG38YLR211C ASG1P40467 964 aa3.74□□□□□ -1.81
ATG38YLR211C VPS25P47142 202 aa3.74□□□□□ -1.81
ATG38YLR211C YLR455WQ06188 304 aa3.74□□□□□ -1.81
ATG38YLR211C MLC2Q06580 163 aa3.74□□□□□ -1.81
ATG38YLR211C CHO1P08456 276 aa3.73□□□□□ -1.81
ATG38YLR211C CCT4P39078 528 aaKnown RBP3.73□□□□□ -1.81
ATG38YLR211C DJP1P40564 432 aa3.73□□□□□ -1.81
ATG38YLR211C ESBP6P53918 673 aa3.73□□□□□ -1.81
ATG38YLR211C ASI1P54074 624 aa3.73□□□□□ -1.81
ATG38YLR211C BET4Q00618 327 aa3.73□□□□□ -1.81
ATG38YLR211C SWF1Q04629 336 aa3.73□□□□□ -1.81
ATG38YLR211C LRE1P25579 583 aaKnown RBP3.72□□□□□ -1.81
ATG38YLR211C ADE17P38009 592 aaKnown RBP3.72□□□□□ -1.81
ATG38YLR211C UBP13P38187 747 aa3.72□□□□□ -1.81
ATG38YLR211C PUG1P40100 303 aa3.72□□□□□ -1.81
ATG38YLR211C UBP8P50102 471 aa3.72□□□□□ -1.81
ATG38YLR211C HOS2P53096 452 aaPredicted RBP3.72□□□□□ -1.81
ATG38YLR211C POS5Q06892 414 aa3.72□□□□□ -1.81
ATG38YLR211C APL5Q08951 932 aaKnown RBP3.72□□□□□ -1.81
ATG38YLR211C SUI3P09064 285 aaKnown RBP3.71□□□□□ -1.82
ATG38YLR211C MIS1P09440 975 aaKnown RBP3.71□□□□□ -1.82
ATG38YLR211C SRP54P20424 541 aaKnown RBP3.71□□□□□ -1.82
ATG38YLR211C EFM2P38347 419 aa3.71□□□□□ -1.82
ATG38YLR211C FSH1P38777 243 aaKnown RBP3.71□□□□□ -1.82
ATG38YLR211C ERR3P42222 437 aa3.71□□□□□ -1.82
ATG38YLR211C ZAP1P47043 880 aa3.71□□□□□ -1.82
ATG38YLR211C ATG23Q06671 453 aa3.71□□□□□ -1.82
ATG38YLR211C VAM6Q07468 1049 aa3.71□□□□□ -1.82
ATG38YLR211C MRP2P10663 115 aaPredicted RBP3.7□□□□□ -1.82
ATG38YLR211C NCP1P16603 691 aaKnown RBP3.7□□□□□ -1.82
ATG38YLR211C STE50P25344 346 aa3.7□□□□□ -1.82
ATG38YLR211C PTP2P29461 750 aa3.7□□□□□ -1.82
ATG38YLR211C TOM20P35180 183 aa3.7□□□□□ -1.82
ATG38YLR211C YTH1Q06102 208 aaPredicted RBP3.7□□□□□ -1.82
ATG38YLR211C GRS2Q06817 618 aa3.7□□□□□ -1.82
ATG38YLR211C CDC23P16522 626 aa3.69□□□□□ -1.82
ATG38YLR211C MSH1P25846 959 aa3.69□□□□□ -1.82
ATG38YLR211C YHL041WP38730 149 aa3.69□□□□□ -1.82
ATG38YLR211C RPT2P40327 437 aaKnown RBP3.69□□□□□ -1.82
ATG38YLR211C SKP2P42843 763 aa3.69□□□□□ -1.82
ATG38YLR211C TRS130Q03660 1102 aa3.69□□□□□ -1.82
ATG38YLR211C YMR317WQ04893 1140 aa3.69□□□□□ -1.82
ATG38YLR211C SWA2Q06677 668 aa3.69□□□□□ -1.82
ATG38YLR211C YMR230W-AQ3E7B5 62 aa3.69□□□□□ -1.82
ATG38YLR211C CBP1P07252 654 aa3.68□□□□□ -1.82
ATG38YLR211C PET111P08468 800 aa3.68□□□□□ -1.82
ATG38YLR211C CLB4P24871 460 aa3.68□□□□□ -1.82
ATG38YLR211C GCD7P32502 381 aaPredicted RBP3.68□□□□□ -1.82
ATG38YLR211C GIS2P53849 153 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
ATG38YLR211C ECI1Q05871 280 aa3.68□□□□□ -1.82
ATG38YLR211C YOR111WQ99210 232 aa3.68□□□□□ -1.82
ATG38YLR211C SEC1P30619 724 aaKnown RBP3.67□□□□□ -1.82
ATG38YLR211C HXT9P40885 567 aa3.67□□□□□ -1.82
ATG38YLR211C YGL260WP53056 76 aa3.67□□□□□ -1.82
ATG38YLR211C MAK10Q02197 733 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms