RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W BUD21Q08492 214 aaPredicted RBP3.66□□□□□ -1.82
NOP56YLR197W CRC1Q12289 327 aa3.66□□□□□ -1.82
NOP56YLR197W PCD1Q12524 340 aa3.66□□□□□ -1.82
NOP56YLR197W SPO16P17122 198 aa3.65□□□□□ -1.82
NOP56YLR197W YAP1P19880 650 aaKnown RBP3.65□□□□□ -1.82
NOP56YLR197W YSP3P25036 478 aa3.65□□□□□ -1.82
NOP56YLR197W NAB3P38996 802 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
NOP56YLR197W YIL161WP40449 235 aaKnown RBP3.65□□□□□ -1.82
NOP56YLR197W COP1P53622 1201 aaKnown RBP3.65□□□□□ -1.82
NOP56YLR197W ADE16P54113 591 aaKnown RBP3.65□□□□□ -1.82
NOP56YLR197W TPK1P06244 397 aa3.65□□□□□ -1.83
NOP56YLR197W PCT1P13259 424 aa3.65□□□□□ -1.83
NOP56YLR197W MSS51P32335 436 aa3.65□□□□□ -1.83
NOP56YLR197W ECM32P32644 1121 aaKnown RBP3.65□□□□□ -1.83
NOP56YLR197W CFD1P40558 293 aa3.65□□□□□ -1.83
NOP56YLR197W CDC1P40986 491 aa3.65□□□□□ -1.83
NOP56YLR197W YJL107CP42947 387 aa3.65□□□□□ -1.83
NOP56YLR197W COG1P53079 417 aa3.65□□□□□ -1.83
NOP56YLR197W CSR1Q06705 408 aaKnown RBP3.65□□□□□ -1.83
NOP56YLR197W GET3Q12154 354 aaKnown RBP3.65□□□□□ -1.83
NOP56YLR197W GAL4P04386 881 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-LR1P0C2J4 438 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-FP0CX61 438 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-GR2P0CX62 438 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-CP25383 438 aa3.64□□□□□ -1.83
NOP56YLR197W PSY4P38193 441 aa3.64□□□□□ -1.83
NOP56YLR197W ARN1P38731 627 aa3.64□□□□□ -1.83
NOP56YLR197W PHM8P40025 321 aa3.64□□□□□ -1.83
NOP56YLR197W YIL024CP40543 189 aa3.64□□□□□ -1.83
NOP56YLR197W BNA1P47096 177 aa3.64□□□□□ -1.83
NOP56YLR197W CTF18P49956 741 aa3.64□□□□□ -1.83
NOP56YLR197W GLO1P50107 326 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-DR2Q03483 438 aa3.64□□□□□ -1.83
NOP56YLR197W YDL121CQ07541 149 aa3.64□□□□□ -1.83
NOP56YLR197W TMA16Q08687 178 aa3.64□□□□□ -1.83
NOP56YLR197W PFA4Q12006 378 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-BQ12260 438 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-OR2Q12293 438 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-DR1Q12392 438 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-OR1Q12439 438 aa3.64□□□□□ -1.83
NOP56YLR197W TY2A-DR3Q99303 438 aa3.64□□□□□ -1.83
NOP56YLR197W SSM4P40318 1319 aa3.64□□□□□ -1.83
NOP56YLR197W RAD16P31244 790 aa3.63□□□□□ -1.83
NOP56YLR197W JHD1P40034 492 aa3.63□□□□□ -1.83
NOP56YLR197W ASE1P50275 885 aa3.63□□□□□ -1.83
NOP56YLR197W RRT6P53117 311 aaPredicted RBP3.63□□□□□ -1.83
NOP56YLR197W DCP2P53550 970 aaKnown RBP3.63□□□□□ -1.83
NOP56YLR197W PDR8Q06149 701 aa3.63□□□□□ -1.83
NOP56YLR197W SWA2Q06677 668 aa3.63□□□□□ -1.83
NOP56YLR197W TRM8Q12009 286 aa3.63□□□□□ -1.83
NOP56YLR197W SNF1P06782 633 aaKnown RBP3.62□□□□□ -1.83
NOP56YLR197W SUI3P09064 285 aaKnown RBP3.62□□□□□ -1.83
NOP56YLR197W PFK2P16862 959 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
NOP56YLR197W FLO5P38894 1075 aa3.62□□□□□ -1.83
NOP56YLR197W ASG1P40467 964 aa3.62□□□□□ -1.83
NOP56YLR197W MNT3P40549 630 aa3.62□□□□□ -1.83
NOP56YLR197W GAT1P43574 510 aa3.62□□□□□ -1.83
NOP56YLR197W PSP1P50896 841 aaKnown RBP3.62□□□□□ -1.83
NOP56YLR197W GTR1Q00582 310 aa3.62□□□□□ -1.83
NOP56YLR197W ICT1Q12385 394 aa3.62□□□□□ -1.83
NOP56YLR197W NKP1Q12493 238 aa3.62□□□□□ -1.83
NOP56YLR197W YPR089WO13585 888 aa3.61□□□□□ -1.83
NOP56YLR197W YER190C-BP0CX94 160 aa3.61□□□□□ -1.83
NOP56YLR197W YEL077W-AP0CX95 160 aa3.61□□□□□ -1.83
NOP56YLR197W YGR296C-BP0CX96 160 aa3.61□□□□□ -1.83
NOP56YLR197W YPL283W-BP0CX97 160 aa3.61□□□□□ -1.83
NOP56YLR197W YPR204C-AP0CX98 160 aa3.61□□□□□ -1.83
NOP56YLR197W SRP54P20424 541 aaKnown RBP3.61□□□□□ -1.83
NOP56YLR197W YCR006CP25350 157 aa3.61□□□□□ -1.83
NOP56YLR197W SSH4P32343 579 aa3.61□□□□□ -1.83
NOP56YLR197W OCT1P35999 772 aa3.61□□□□□ -1.83
NOP56YLR197W UME6P39001 836 aa3.61□□□□□ -1.83
NOP56YLR197W TPA1P40032 644 aaKnown RBP3.61□□□□□ -1.83
NOP56YLR197W IST3P40565 148 aaPredicted RBP3.61□□□□□ -1.83
NOP56YLR197W IML2P47031 731 aa3.61□□□□□ -1.83
NOP56YLR197W CRN1Q06440 651 aa3.61□□□□□ -1.83
NOP56YLR197W RGT2Q12300 763 aa3.61□□□□□ -1.83
NOP56YLR197W RRI1Q12468 440 aa3.61□□□□□ -1.83
NOP56YLR197W MRP2P10663 115 aaPredicted RBP3.6□□□□□ -1.83
NOP56YLR197W CNA1P23287 553 aa3.6□□□□□ -1.83
NOP56YLR197W RPT3P33298 428 aaKnown RBP3.6□□□□□ -1.83
NOP56YLR197W TEF4P36008 412 aaKnown RBP3.6□□□□□ -1.83
NOP56YLR197W UBP13P38187 747 aa3.6□□□□□ -1.83
NOP56YLR197W YML131WQ03102 365 aa3.6□□□□□ -1.83
NOP56YLR197W VID22Q05934 901 aa3.6□□□□□ -1.83
NOP56YLR197W ECM22Q05958 814 aaPredicted RBP3.6□□□□□ -1.83
NOP56YLR197W PIG1Q06216 648 aa3.6□□□□□ -1.83
NOP56YLR197W GEP3Q08622 556 aa3.6□□□□□ -1.83
NOP56YLR197W ERG27Q12452 347 aaKnown RBP3.6□□□□□ -1.83
NOP56YLR197W TMT1P32643 299 aa3.6□□□□□ -1.83
NOP56YLR197W ADE17P38009 592 aaKnown RBP3.6□□□□□ -1.83
NOP56YLR197W VPS41P38959 992 aa3.6□□□□□ -1.83
NOP56YLR197W SNM1P40993 198 aa3.6□□□□□ -1.83
NOP56YLR197W RPL15BP54780 204 aaPredicted RBP3.6□□□□□ -1.83
NOP56YLR197W MCH4Q08268 501 aa3.6□□□□□ -1.83
NOP56YLR197W HER1Q12276 1246 aa3.6□□□□□ -1.83
NOP56YLR197W ERG8P24521 451 aa3.59□□□□□ -1.84
NOP56YLR197W SRB5P32585 307 aa3.59□□□□□ -1.84
NOP56YLR197W SLC1P33333 303 aa3.59□□□□□ -1.84
NOP56YLR197W TFC3P34111 1160 aa3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms