RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RRN6P32786 894 aa2.34□□□□□ -2.03
CSF1YLR087C SPT10P35208 640 aa2.34□□□□□ -2.03
CSF1YLR087C SPO14P36126 1683 aa2.34□□□□□ -2.03
CSF1YLR087C SHM1P37292 490 aaPredicted RBP2.34□□□□□ -2.03
CSF1YLR087C SHG1P38337 142 aa2.34□□□□□ -2.03
CSF1YLR087C HSP10P38910 106 aa2.34□□□□□ -2.03
CSF1YLR087C AST2P39945 430 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C NEO1P40527 1151 aa2.34□□□□□ -2.03
CSF1YLR087C IRC7P43623 340 aa2.34□□□□□ -2.03
CSF1YLR087C COX16P47081 118 aa2.34□□□□□ -2.03
CSF1YLR087C NOG2P53742 486 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C ORC3P54790 616 aa2.34□□□□□ -2.03
CSF1YLR087C DAK1P54838 584 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C PEX25Q02969 394 aa2.34□□□□□ -2.03
CSF1YLR087C YLR413WQ06689 675 aa2.34□□□□□ -2.03
CSF1YLR087C THI21Q08975 551 aa2.34□□□□□ -2.03
CSF1YLR087C YBR255C-AQ3E776 120 aa2.34□□□□□ -2.03
CSF1YLR087C DPH2P32461 534 aa2.34□□□□□ -2.03
CSF1YLR087C HXT3P32466 567 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C CYM1P32898 989 aa2.34□□□□□ -2.03
CSF1YLR087C UBC6P33296 250 aaPredicted RBP2.34□□□□□ -2.03
CSF1YLR087C HCS1P34243 683 aa2.34□□□□□ -2.03
CSF1YLR087C TAF14P35189 244 aa2.34□□□□□ -2.03
CSF1YLR087C NTR2P36118 322 aaPredicted RBP2.34□□□□□ -2.03
CSF1YLR087C MBP1P39678 833 aa2.34□□□□□ -2.03
CSF1YLR087C TGL3P40308 642 aa2.34□□□□□ -2.03
CSF1YLR087C TRM44Q02648 567 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C DTD1Q07648 150 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
CSF1YLR087C FAS2P19097 1887 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C LEU4P06208 619 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C HVG1P0CE11 249 aa2.34□□□□□ -2.03
CSF1YLR087C RPS24AP0CX31 135 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C RPS24BP0CX32 135 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C RAD57P25301 460 aa2.34□□□□□ -2.03
CSF1YLR087C NTH1P32356 751 aa2.34□□□□□ -2.03
CSF1YLR087C TFB1P32776 642 aa2.34□□□□□ -2.03
CSF1YLR087C CKB2P38930 258 aa2.34□□□□□ -2.03
CSF1YLR087C AZF1P41696 914 aa2.34□□□□□ -2.03
CSF1YLR087C BNA6P43619 295 aa2.34□□□□□ -2.03
CSF1YLR087C ATH1P48016 1211 aa2.34□□□□□ -2.03
CSF1YLR087C ALG12P53730 551 aa2.34□□□□□ -2.03
CSF1YLR087C MRPS16Q02608 121 aa2.34□□□□□ -2.03
CSF1YLR087C YDR514CQ04408 483 aa2.34□□□□□ -2.03
CSF1YLR087C DIA2Q08496 732 aaPredicted RBP2.34□□□□□ -2.03
CSF1YLR087C REC8Q12188 680 aa2.34□□□□□ -2.03
CSF1YLR087C ARG81P05085 880 aa2.34□□□□□ -2.03
CSF1YLR087C NUC1P08466 329 aa2.34□□□□□ -2.03
CSF1YLR087C TYR1P20049 452 aa2.34□□□□□ -2.03
CSF1YLR087C SPS19P32573 292 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C RIM101P33400 625 aa2.34□□□□□ -2.03
CSF1YLR087C BOI1P38041 980 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C COS8P38723 381 aa2.34□□□□□ -2.03
CSF1YLR087C YHL017WP38745 532 aa2.34□□□□□ -2.03
CSF1YLR087C GPI8P49018 411 aa2.34□□□□□ -2.03
CSF1YLR087C ARI1P53111 347 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C CDC55Q00362 526 aa2.34□□□□□ -2.03
CSF1YLR087C BET4Q00618 327 aa2.34□□□□□ -2.03
CSF1YLR087C TUM1Q08686 304 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C YPL277CQ08989 487 aa2.34□□□□□ -2.03
CSF1YLR087C YKL068W-AQ3E826 78 aa2.34□□□□□ -2.03
CSF1YLR087C FLO11P08640 1367 aa2.34□□□□□ -2.03
CSF1YLR087C STE2D6VTK4 431 aa2.34□□□□□ -2.04
CSF1YLR087C ARG4P04076 463 aaPredicted RBP2.34□□□□□ -2.04
CSF1YLR087C PRP40P33203 583 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C PGM1P33401 570 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C RFC3P38629 340 aa2.34□□□□□ -2.04
CSF1YLR087C PRP39P39682 629 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C ASK10P48361 1146 aa2.34□□□□□ -2.04
CSF1YLR087C HOL1P53389 586 aa2.34□□□□□ -2.04
CSF1YLR087C RPT4P53549 437 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C NUP49Q02199 472 aa2.34□□□□□ -2.04
CSF1YLR087C NKP2Q06162 153 aa2.34□□□□□ -2.04
CSF1YLR087C RAD59Q12223 238 aa2.34□□□□□ -2.04
CSF1YLR087C ATG34Q12292 412 aa2.34□□□□□ -2.04
CSF1YLR087C HRT3Q12347 344 aa2.34□□□□□ -2.04
CSF1YLR087C BBP1Q12365 385 aa2.34□□□□□ -2.04
CSF1YLR087C RAX2Q12465 1220 aa2.34□□□□□ -2.04
CSF1YLR087C PTC5Q12511 572 aa2.34□□□□□ -2.04
CSF1YLR087C SEC23P15303 768 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C ERG9P29704 444 aa2.34□□□□□ -2.04
CSF1YLR087C GYP6P32806 458 aa2.34□□□□□ -2.04
CSF1YLR087C FUI1P38196 639 aa2.34□□□□□ -2.04
CSF1YLR087C NSA1P53136 463 aaPredicted RBP2.34□□□□□ -2.04
CSF1YLR087C ESBP6P53918 673 aa2.34□□□□□ -2.04
CSF1YLR087C TVP18Q04767 167 aa2.34□□□□□ -2.04
CSF1YLR087C ADY4Q05955 493 aa2.34□□□□□ -2.04
CSF1YLR087C YCL012CQ8J0M4 134 aa2.34□□□□□ -2.04
CSF1YLR087C PRB1P09232 635 aa2.34□□□□□ -2.04
CSF1YLR087C HNM1P19807 563 aa2.34□□□□□ -2.04
CSF1YLR087C KGD1P20967 1014 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C BMH1P29311 267 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C MAL33P38157 468 aa2.34□□□□□ -2.04
CSF1YLR087C HEK2P38199 381 aaKnown RBP RIP-Chip data2.34□□□□□ -2.04not detected
CSF1YLR087C MMF1P40185 145 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C VTC4P47075 721 aa2.34□□□□□ -2.04
CSF1YLR087C YBP2P53169 641 aa2.34□□□□□ -2.04
CSF1YLR087C ZPR1P53303 486 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C MRI1Q06489 411 aaKnown RBP2.34□□□□□ -2.04
CSF1YLR087C ASR1Q06834 288 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms