RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W NRT1Q08485 598 aa7.52□□□□□ -1.21
SNF7YLR025W REC8Q12188 680 aa7.52□□□□□ -1.21
SNF7YLR025W CMR1Q12510 522 aaKnown RBP7.52□□□□□ -1.21
SNF7YLR025W SEC39Q12745 709 aa7.52□□□□□ -1.21
SNF7YLR025W AI1P03875 834 aa7.51□□□□□ -1.21
SNF7YLR025W NAR1P23503 491 aaKnown RBP7.51□□□□□ -1.21
SNF7YLR025W YCL068CP25593 260 aa7.51□□□□□ -1.21
SNF7YLR025W ABZ1P37254 787 aaPredicted RBP7.51□□□□□ -1.21
SNF7YLR025W ALG14P38242 237 aa7.51□□□□□ -1.21
SNF7YLR025W AMN1P38285 549 aaPredicted RBP7.51□□□□□ -1.21
SNF7YLR025W AIM18P38884 321 aa7.51□□□□□ -1.21
SNF7YLR025W STN1P38960 494 aa7.51□□□□□ -1.21
SNF7YLR025W ALG5P40350 334 aa7.51□□□□□ -1.21
SNF7YLR025W YJR142WP47173 342 aa7.51□□□□□ -1.21
SNF7YLR025W MON1P53129 644 aa7.51□□□□□ -1.21
SNF7YLR025W USE1P53146 245 aa7.51□□□□□ -1.21
SNF7YLR025W COS6P53344 381 aa7.51□□□□□ -1.21
SNF7YLR025W RCF2P53721 224 aa7.51□□□□□ -1.21
SNF7YLR025W YLR225CQ05948 407 aaKnown RBP7.51□□□□□ -1.21
SNF7YLR025W BCP1Q06338 283 aa7.51□□□□□ -1.21
SNF7YLR025W OSW1Q08692 278 aa7.51□□□□□ -1.21
SNF7YLR025W RGS2Q99188 309 aa7.51□□□□□ -1.21
SNF7YLR025W NHA1Q99271 985 aa7.51□□□□□ -1.21
SNF7YLR025W PAB1P04147 577 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
SNF7YLR025W HRR25P29295 494 aaKnown RBP7.5□□□□□ -1.21
SNF7YLR025W CYM1P32898 989 aa7.5□□□□□ -1.21
SNF7YLR025W POL31P46957 487 aa7.5□□□□□ -1.21
SNF7YLR025W YJL132WP47014 750 aa7.5□□□□□ -1.21
SNF7YLR025W SOK2P53438 785 aaPredicted RBP7.5□□□□□ -1.21
SNF7YLR025W YNR065CP53751 1116 aa7.5□□□□□ -1.21
SNF7YLR025W IST1P53843 298 aaPredicted RBP7.5□□□□□ -1.21
SNF7YLR025W TEP1P53916 434 aa7.5□□□□□ -1.21
SNF7YLR025W MUK1Q02866 612 aa7.5□□□□□ -1.21
SNF7YLR025W YMR160WQ03823 816 aa7.5□□□□□ -1.21
SNF7YLR025W ESC8Q08119 714 aa7.5□□□□□ -1.21
SNF7YLR025W KCS1Q12494 1050 aa7.5□□□□□ -1.21
SNF7YLR025W MOT1P32333 1867 aa7.49□□□□□ -1.21
SNF7YLR025W ECM29P38737 1868 aa7.49□□□□□ -1.21
SNF7YLR025W RPL24AP04449 155 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W ERR1P0CX10 437 aa7.49□□□□□ -1.21
SNF7YLR025W ERR2P0CX11 437 aa7.49□□□□□ -1.21
SNF7YLR025W SEC14P24280 304 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W RSA4P25382 515 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W GID7P25569 745 aa7.49□□□□□ -1.21
SNF7YLR025W MCM5P29496 775 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W RIM1P32445 135 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W CSE2P33308 149 aa7.49□□□□□ -1.21
SNF7YLR025W CBF5P33322 483 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
SNF7YLR025W HSP78P33416 811 aa7.49□□□□□ -1.21
SNF7YLR025W TFC3P34111 1160 aa7.49□□□□□ -1.21
SNF7YLR025W CUE2P36075 443 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W RDH54P38086 958 aa7.49□□□□□ -1.21
SNF7YLR025W PHO89P38361 574 aa7.49□□□□□ -1.21
SNF7YLR025W PRM9P39551 298 aa7.49□□□□□ -1.21
SNF7YLR025W GIP2P40036 548 aa7.49□□□□□ -1.21
SNF7YLR025W JEM1P40358 645 aa7.49□□□□□ -1.21
SNF7YLR025W ERR3P42222 437 aa7.49□□□□□ -1.21
SNF7YLR025W RRT5P43607 289 aa7.49□□□□□ -1.21
SNF7YLR025W GCV2P49095 1034 aa7.49□□□□□ -1.21
SNF7YLR025W YPR003CP53394 754 aa7.49□□□□□ -1.21
SNF7YLR025W COP1P53622 1201 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W ATP25Q03153 612 aa7.49□□□□□ -1.21
SNF7YLR025W RLI1Q03195 608 aaKnown RBP7.49□□□□□ -1.21
SNF7YLR025W PRP3Q03338 469 aaPredicted RBP7.49□□□□□ -1.21
SNF7YLR025W ACL4Q03771 387 aa7.49□□□□□ -1.21
SNF7YLR025W DDC1Q08949 612 aa7.49□□□□□ -1.21
SNF7YLR025W ARP7Q12406 477 aa7.49□□□□□ -1.21
SNF7YLR025W KGD2P19262 463 aaPredicted RBP7.48□□□□□ -1.21
SNF7YLR025W VPS34P22543 875 aa7.48□□□□□ -1.21
SNF7YLR025W DGR2P32330 852 aa7.48□□□□□ -1.21
SNF7YLR025W HEM12P32347 362 aaPredicted RBP7.48□□□□□ -1.21
SNF7YLR025W PHA2P32452 334 aa7.48□□□□□ -1.21
SNF7YLR025W NUP120P35729 1037 aa7.48□□□□□ -1.21
SNF7YLR025W SRP68P38687 599 aaKnown RBP7.48□□□□□ -1.21
SNF7YLR025W TRM5P38793 499 aa7.48□□□□□ -1.21
SNF7YLR025W BZZ1P38822 633 aa7.48□□□□□ -1.21
SNF7YLR025W YAP1801P38856 637 aa7.48□□□□□ -1.21
SNF7YLR025W NMD3P38861 518 aaKnown RBP7.48□□□□□ -1.21
SNF7YLR025W LAA1P39526 2014 aa7.48□□□□□ -1.21
SNF7YLR025W AXL1P40851 1208 aa7.48□□□□□ -1.21
SNF7YLR025W CCT7P42943 550 aaKnown RBP7.48□□□□□ -1.21
SNF7YLR025W LSB6P42951 607 aa7.48□□□□□ -1.21
SNF7YLR025W CNN1P43618 361 aa7.48□□□□□ -1.21
SNF7YLR025W ROK1P45818 564 aaPredicted RBP7.48□□□□□ -1.21
SNF7YLR025W DOS2P54858 310 aa7.48□□□□□ -1.21
SNF7YLR025W SLT2Q00772 484 aa7.48□□□□□ -1.21
SNF7YLR025W SPO19Q03029 223 aa7.48□□□□□ -1.21
SNF7YLR025W YMR209CQ03648 457 aa7.48□□□□□ -1.21
SNF7YLR025W FMN1Q03778 218 aa7.48□□□□□ -1.21
SNF7YLR025W TVP15Q03860 143 aa7.48□□□□□ -1.21
SNF7YLR025W HPT1Q04178 221 aaKnown RBP7.48□□□□□ -1.21
SNF7YLR025W DIA2Q08496 732 aaPredicted RBP7.48□□□□□ -1.21
SNF7YLR025W ICL2Q12031 575 aa7.48□□□□□ -1.21
SNF7YLR025W RIF1P29539 1916 aa7.47□□□□□ -1.21
SNF7YLR025W CIT2P08679 460 aa7.47□□□□□ -1.21
SNF7YLR025W MRPS28P21771 286 aa7.47□□□□□ -1.21
SNF7YLR025W MLS1P30952 554 aa7.47□□□□□ -1.21
SNF7YLR025W MRS6P32864 603 aaKnown RBP7.47□□□□□ -1.21
SNF7YLR025W YBR053CP38235 358 aa7.47□□□□□ -1.21
SNF7YLR025W UTP9P38882 575 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms