RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C HXT6P39003 570 aaKnown RBP3.61□□□□□ -1.83
SDO1YLR022C HXT7P39004 570 aa3.61□□□□□ -1.83
SDO1YLR022C PES4P39684 611 aa3.61□□□□□ -1.83
SDO1YLR022C GZF3P42944 551 aaKnown RBP3.61□□□□□ -1.83
SDO1YLR022C SAD1P43589 448 aa3.61□□□□□ -1.83
SDO1YLR022C HLJ1P48353 224 aa3.61□□□□□ -1.83
SDO1YLR022C PTA1Q01329 785 aaPredicted RBP3.61□□□□□ -1.83
SDO1YLR022C ECM9Q02202 377 aa3.61□□□□□ -1.83
SDO1YLR022C NGL2Q03264 515 aaKnown RBP3.61□□□□□ -1.83
SDO1YLR022C MTQ2Q03920 221 aaPredicted RBP3.61□□□□□ -1.83
SDO1YLR022C HLR1Q04429 423 aa3.61□□□□□ -1.83
SDO1YLR022C THI73Q07904 523 aa3.61□□□□□ -1.83
SDO1YLR022C SLK19Q08581 821 aaKnown RBP3.61□□□□□ -1.83
SDO1YLR022C RPS21BQ3E754 87 aaKnown RBP3.61□□□□□ -1.83
SDO1YLR022C RAD61Q99359 647 aa3.61□□□□□ -1.83
SDO1YLR022C PRP8P33334 2413 aaKnown RBP3.6□□□□□ -1.83
SDO1YLR022C CET1O13297 549 aaPredicted RBP3.6□□□□□ -1.83
SDO1YLR022C DAL5P15365 543 aa3.6□□□□□ -1.83
SDO1YLR022C STE4P18851 423 aa3.6□□□□□ -1.83
SDO1YLR022C RPA135P22138 1203 aaKnown RBP3.6□□□□□ -1.83
SDO1YLR022C PRE4P30657 266 aa3.6□□□□□ -1.83
SDO1YLR022C YMC1P32331 307 aa3.6□□□□□ -1.83
SDO1YLR022C OAF3P36023 863 aa3.6□□□□□ -1.83
SDO1YLR022C ELF1P36053 145 aa3.6□□□□□ -1.83
SDO1YLR022C RFC1P38630 861 aaKnown RBP3.6□□□□□ -1.83
SDO1YLR022C IRC8P47046 822 aa3.6□□□□□ -1.83
SDO1YLR022C TAF4P50105 388 aa3.6□□□□□ -1.83
SDO1YLR022C RTS3P53289 263 aa3.6□□□□□ -1.83
SDO1YLR022C YNL134CP53912 376 aaKnown RBP3.6□□□□□ -1.83
SDO1YLR022C SEG1Q04279 960 aa3.6□□□□□ -1.83
SDO1YLR022C HFD1Q04458 532 aa3.6□□□□□ -1.83
SDO1YLR022C SUE1Q06524 206 aa3.6□□□□□ -1.83
SDO1YLR022C ULA1Q12059 462 aa3.6□□□□□ -1.83
SDO1YLR022C HFI1Q12060 488 aa3.6□□□□□ -1.83
SDO1YLR022C YLR422WQ06409 1932 aa3.6□□□□□ -1.83
SDO1YLR022C ADE5,7P07244 802 aaKnown RBP3.59□□□□□ -1.83
SDO1YLR022C UBC1P21734 215 aaKnown RBP3.59□□□□□ -1.83
SDO1YLR022C PEX34P25584 144 aa3.59□□□□□ -1.83
SDO1YLR022C SEC65P29478 273 aa3.59□□□□□ -1.83
SDO1YLR022C MIC60P36112 540 aa3.59□□□□□ -1.83
SDO1YLR022C CCL1P37366 393 aa3.59□□□□□ -1.83
SDO1YLR022C YHL026CP38740 315 aa3.59□□□□□ -1.83
SDO1YLR022C NDT80P38830 627 aa3.59□□□□□ -1.83
SDO1YLR022C HMF1P40037 129 aaKnown RBP3.59□□□□□ -1.83
SDO1YLR022C PMT3P47190 753 aa3.59□□□□□ -1.83
SDO1YLR022C FMS1P50264 508 aa3.59□□□□□ -1.83
SDO1YLR022C LSB1P53281 241 aa3.59□□□□□ -1.83
SDO1YLR022C FOL1P53848 824 aa3.59□□□□□ -1.83
SDO1YLR022C SUB1P54000 292 aaKnown RBP3.59□□□□□ -1.83
SDO1YLR022C RIM13Q03792 727 aa3.59□□□□□ -1.83
SDO1YLR022C ICT1Q12385 394 aa3.59□□□□□ -1.83
SDO1YLR022C PCD1Q12524 340 aa3.59□□□□□ -1.83
SDO1YLR022C CSF1Q12150 2958 aa3.59□□□□□ -1.84
SDO1YLR022C RIF1P29539 1916 aa3.58□□□□□ -1.84
SDO1YLR022C RME1P32338 300 aaKnown RBP3.58□□□□□ -1.84
SDO1YLR022C CSE2P33308 149 aa3.58□□□□□ -1.84
SDO1YLR022C TVP38P36164 337 aa3.58□□□□□ -1.84
SDO1YLR022C MED6P38782 295 aa3.58□□□□□ -1.84
SDO1YLR022C DUN1P39009 513 aa3.58□□□□□ -1.84
SDO1YLR022C PCF11P39081 626 aaPredicted RBP3.58□□□□□ -1.84
SDO1YLR022C TMN3P40071 706 aa3.58□□□□□ -1.84
SDO1YLR022C PRM2P40534 656 aa3.58□□□□□ -1.84
SDO1YLR022C MNN11P46985 422 aaKnown RBP3.58□□□□□ -1.84
SDO1YLR022C YJR142WP47173 342 aa3.58□□□□□ -1.84
SDO1YLR022C ENP2P48234 707 aaKnown RBP3.58□□□□□ -1.84
SDO1YLR022C GPG1P53130 126 aa3.58□□□□□ -1.84
SDO1YLR022C YGL117WP53133 265 aa3.58□□□□□ -1.84
SDO1YLR022C MDR1P53258 950 aa3.58□□□□□ -1.84
SDO1YLR022C CPR8P53728 308 aa3.58□□□□□ -1.84
SDO1YLR022C CSL4P53859 292 aaPredicted RBP3.58□□□□□ -1.84
SDO1YLR022C UME1Q03010 460 aa3.58□□□□□ -1.84
SDO1YLR022C ARG7Q04728 441 aa3.58□□□□□ -1.84
SDO1YLR022C YTM1Q12024 460 aaPredicted RBP3.58□□□□□ -1.84
SDO1YLR022C PDH1Q12428 516 aaKnown RBP3.58□□□□□ -1.84
SDO1YLR022C GLN4P13188 809 aaKnown RBP3.57□□□□□ -1.84
SDO1YLR022C CDC26P14724 124 aa3.57□□□□□ -1.84
SDO1YLR022C TUP1P16649 713 aa3.57□□□□□ -1.84
SDO1YLR022C ACO1P19414 778 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SDO1YLR022C PRO3P32263 286 aaKnown RBP3.57□□□□□ -1.84
SDO1YLR022C MF(ALPHA)2P32435 120 aa3.57□□□□□ -1.84
SDO1YLR022C CDS1P38221 457 aa3.57□□□□□ -1.84
SDO1YLR022C CRG1P38892 291 aaRIP-Chip data3.57□□□□□ -1.84not detected
SDO1YLR022C RRP8P38961 392 aaKnown RBP3.57□□□□□ -1.84
SDO1YLR022C OAF1P39720 1047 aaPredicted RBP3.57□□□□□ -1.84
SDO1YLR022C YEL025CP39991 1188 aa3.57□□□□□ -1.84
SDO1YLR022C FTR1P40088 404 aa3.57□□□□□ -1.84
SDO1YLR022C YMR147WP40218 223 aaKnown RBP3.57□□□□□ -1.84
SDO1YLR022C THI6P41835 540 aa3.57□□□□□ -1.84
SDO1YLR022C CEF1Q03654 590 aaPredicted RBP3.57□□□□□ -1.84
SDO1YLR022C MPD2Q99316 277 aa3.57□□□□□ -1.84
SDO1YLR022C PGK1P00560 416 aaKnown RBP3.56□□□□□ -1.84
SDO1YLR022C NUC1P08466 329 aa3.56□□□□□ -1.84
SDO1YLR022C MAS1P10507 462 aa3.56□□□□□ -1.84
SDO1YLR022C PDE1P22434 369 aa3.56□□□□□ -1.84
SDO1YLR022C MTC7P32633 139 aa3.56□□□□□ -1.84
SDO1YLR022C TMT1P32643 299 aa3.56□□□□□ -1.84
SDO1YLR022C CSE1P33307 960 aa3.56□□□□□ -1.84
SDO1YLR022C TOM20P35180 183 aa3.56□□□□□ -1.84
SDO1YLR022C TCD2P36101 447 aaKnown RBP3.56□□□□□ -1.84
SDO1YLR022C FAT1P38225 669 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms