RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	ROM1	P53046	1155 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	REG1	Q00816	1014 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	YOR378W	Q08902	515 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	HSF1	P10961	833 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	SRP101	P32916	621 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	TDA10	P42938	290 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	YGL140C	P53120	1219 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	GND2	P53319	492 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	UBX4	P54730	416 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	YMR206W	Q03695	313 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	NHX1	Q04121	633 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	CDC123	Q05791	360 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	YSH1	Q06224	779 aa	Predicted RBP	5.2	□□□□□ -1.58
AVT3	YKL146W	PEX15	Q08215	383 aa		5.2	□□□□□ -1.58
AVT3	YKL146W	ERG20	P08524	352 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
AVT3	YKL146W	MIH1	P23748	554 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	AAD3	P25612	363 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	HRR25	P29295	494 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	RIM1	P32445	135 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	CYM1	P32898	989 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	TFA2	P36145	328 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	RDH54	P38086	958 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	APM3	P38153	483 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	OAF1	P39720	1047 aa	Predicted RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	PEP8	P40335	379 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	IST3	P40565	148 aa	Predicted RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	LSB6	P42951	607 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	NOP15	P53927	220 aa	Predicted RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	TRS31	Q03337	283 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	SEG1	Q04279	960 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	RSC2	Q06488	889 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	BUD20	Q08004	166 aa	Predicted RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	SLD7	Q08457	257 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	SLP1	Q12232	587 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	FUR4	P05316	633 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	SST2	P11972	698 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	INO1	P11986	533 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	ARF2	P19146	181 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	ATP12	P22135	325 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	GDA1	P32621	518 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	MRP21	P38175	177 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	YBR032W	P38223	100 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	YBR062C	P38239	180 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	CCT8	P47079	568 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	AMA1	P50082	593 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	STR3	P53101	465 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	EFM6	P53970	246 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	YPL014W	Q02606	381 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	LEE1	Q02799	301 aa	Known RBP	5.19	□□□□□ -1.58
AVT3	YKL146W	ENT2	Q05785	613 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	NDD1	Q08887	554 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	KCS1	Q12494	1050 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	RGS2	Q99188	309 aa		5.19	□□□□□ -1.58
AVT3	YKL146W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
AVT3	YKL146W	CLN1	P20437	546 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	AAT2	P23542	418 aa	Known RBP	5.18	□□□□□ -1.58
AVT3	YKL146W	YHI9	P38765	294 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	IES5	P40060	125 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	RGI2	P40188	164 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	PFK26	P40433	827 aa	Known RBP	5.18	□□□□□ -1.58
AVT3	YKL146W	OYE3	P41816	400 aa	Predicted RBP	5.18	□□□□□ -1.58
AVT3	YKL146W	YJL107C	P42947	387 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	PAN2	P53010	1115 aa	Predicted RBP	5.18	□□□□□ -1.58
AVT3	YKL146W	TAF6	P53040	516 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	YTP1	P53584	459 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	RPN9	Q04062	393 aa	Known RBP	5.18	□□□□□ -1.58
AVT3	YKL146W	SHE9	Q04172	456 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	TAF11	Q04226	346 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	CMS1	Q07897	291 aa	Known RBP	5.18	□□□□□ -1.58
AVT3	YKL146W	PEX11	Q12462	236 aa		5.18	□□□□□ -1.58
AVT3	YKL146W	SCH9	P11792	824 aa	Known RBP	5.17	□□□□□ -1.58
AVT3	YKL146W	MRPL8	P22353	238 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	SEC14	P24280	304 aa	Known RBP	5.17	□□□□□ -1.58
AVT3	YKL146W	CLB1	P24868	471 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	YSP3	P25036	478 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	RBK1	P25332	333 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	PHO87	P25360	923 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	DCC1	P25559	380 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	MRE11	P32829	692 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	YHR020W	P38708	688 aa	Known RBP	5.17	□□□□□ -1.58
AVT3	YKL146W	MEF2	P39677	819 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	EXO1	P39875	702 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	FAR3	P46671	204 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	BUD13	P46947	266 aa	Predicted RBP	5.17	□□□□□ -1.58
AVT3	YKL146W	ACS2	P52910	683 aa	Known RBP	5.17	□□□□□ -1.58
AVT3	YKL146W	NUP100	Q02629	959 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	YML119W	Q03208	357 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	YMR209C	Q03648	457 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	YDR109C	Q04585	715 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	GSF2	Q04697	403 aa	Known RBP	5.17	□□□□□ -1.58
AVT3	YKL146W	YLR177W	Q06251	628 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	ERP4	Q12450	207 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	SPE4	Q12455	300 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	UBR1	P19812	1950 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	NSP1	P14907	823 aa	Known RBP	5.17	□□□□□ -1.58
AVT3	YKL146W	DAL81	P21657	970 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	SIR1	P21691	654 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	RAM1	P22007	431 aa		5.17	□□□□□ -1.58
AVT3	YKL146W	BEM1	P29366	551 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms