RNA–Protein interactions for RNA: YKL113C

RAD27, Transcript of 5' to 3' exonuclease, 5' flap endonuclease, yeast

Gene RAD27, Length 1,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD27	YKL113C	ADI1	Q03677	179 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	SND1	Q04007	877 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	TIF35	Q04067	274 aa	Known RBP	4.36	□□□□□ -1.71
RAD27	YKL113C	BUD22	Q04347	519 aa	Known RBP	4.36	□□□□□ -1.71
RAD27	YKL113C	YMR111C	Q04461	462 aa	Predicted RBP	4.36	□□□□□ -1.71
RAD27	YKL113C	DFG5	Q05031	458 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	YLR225C	Q05948	407 aa	Known RBP	4.36	□□□□□ -1.71
RAD27	YKL113C	YLR352W	Q06479	807 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	SWA2	Q06677	668 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	YLL056C	Q12177	298 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	WTM2	Q12206	467 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	SLP1	Q12232	587 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	WHI5	Q12416	295 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	RRP36	Q12481	300 aa	Predicted RBP	4.36	□□□□□ -1.71
RAD27	YKL113C	SEC39	Q12745	709 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	RTP1	Q12751	981 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	IZH4	Q99393	312 aa		4.36	□□□□□ -1.71
RAD27	YKL113C	CCP1	P00431	361 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	TPK1	P06244	397 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	SSC1	P0CS90	654 aa	Known RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	GPA2	P10823	449 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	EXO70	P19658	623 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	HSP60	P19882	572 aa	Known RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	SAT4	P25333	603 aa	Known RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	RSA4	P25382	515 aa	Known RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	HXT3	P32466	567 aa	Known RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	VPH1	P32563	840 aa	Known RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	SCD5	P34758	872 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	APN2	P38207	520 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	YBR053C	P38235	358 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	FZO1	P38297	855 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	AVT2	P39981	480 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	MPH1	P40562	993 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	IML2	P47031	731 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	PEX31	P53203	462 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	RCF2	P53721	224 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	YNL134C	P53912	376 aa	Known RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	MUB1	Q03162	620 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	FMN1	Q03778	218 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	RKM2	Q03942	479 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	NRT1	Q08485	598 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	OSW1	Q08692	278 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	YPL191C	Q08930	360 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	YLR053C	Q12026	108 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	GNT1	Q12096	491 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	SPE4	Q12455	300 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	NOT5	Q12514	560 aa	Predicted RBP	4.35	□□□□□ -1.71
RAD27	YKL113C	AI5_ALPHA	Q9ZZX1	630 aa		4.35	□□□□□ -1.71
RAD27	YKL113C	INH1	P01097	85 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	ADE4	P04046	510 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	LEU1	P07264	779 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	RED1	P14291	827 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	VPS3	P23643	1011 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	PGS1	P25578	521 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	LRE1	P25579	583 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	GAC1	P28006	793 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	PMI40	P29952	429 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	SRP101	P32916	621 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	DUR3	P33413	735 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	STE13	P33894	931 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	YKL100C	P34248	587 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	KES1	P35844	434 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	RRN3	P36070	627 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	RDH54	P38086	958 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	GRS1	P38088	690 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	RIM2	P38127	377 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	SHE3	P38272	425 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	HSL7	P38274	827 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	SLX1	P38324	304 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	RFC3	P38629	340 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	YHL026C	P38740	315 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	GGA2	P38817	585 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	STL1	P39932	569 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	RIO2	P40160	425 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	AXL1	P40851	1208 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	RRT5	P43607	289 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	MNN11	P46985	422 aa	Known RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	STB4	P50104	949 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	MIG2	P53035	382 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	HOL1	P53389	586 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	BIO4	P53630	237 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	UBX4	P54730	416 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	STP1	Q00947	519 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	ECM11	Q04110	302 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	MDM36	Q06820	579 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	THI20	Q08224	551 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	DNL4	Q08387	944 aa	Predicted RBP	4.34	□□□□□ -1.71
RAD27	YKL113C	ICL2	Q12031	575 aa		4.34	□□□□□ -1.71
RAD27	YKL113C	TEF1	P02994	458 aa	Known RBP	4.33	□□□□□ -1.72
RAD27	YKL113C	ERR1	P0CX10	437 aa		4.33	□□□□□ -1.72
RAD27	YKL113C	ERR2	P0CX11	437 aa		4.33	□□□□□ -1.72
RAD27	YKL113C	NPP1	P25353	742 aa		4.33	□□□□□ -1.72
RAD27	YKL113C	GID7	P25569	745 aa		4.33	□□□□□ -1.72
RAD27	YKL113C	DAL80	P26343	269 aa		4.33	□□□□□ -1.72
RAD27	YKL113C	RPC19	P28000	142 aa	Known RBP	4.33	□□□□□ -1.72
RAD27	YKL113C	HRR25	P29295	494 aa	Known RBP	4.33	□□□□□ -1.72
RAD27	YKL113C	URA10	P30402	227 aa		4.33	□□□□□ -1.72
RAD27	YKL113C	MLS1	P30952	554 aa		4.33	□□□□□ -1.72
RAD27	YKL113C	RIM1	P32445	135 aa	Known RBP	4.33	□□□□□ -1.72
RAD27	YKL113C	BEM3	P32873	1128 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms